ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHY:A118:A185

Extra

PDB:
ATOM 1 O3' U A 117 26.880 15.911 60.593 1.00143.34 O
ATOM 2 P G A 118 26.072 16.549 61.827 1.00153.28 P
ATOM 3 OP1 G A 118 25.978 18.010 61.582 1.00134.00 O
ATOM 4 OP2 G A 118 26.717 16.070 63.075 1.00134.30 O
ATOM 5 O5' G A 118 24.641 15.881 61.671 1.00129.30 O
ATOM 6 C5' G A 118 24.515 14.525 61.260 1.00128.84 C
ATOM 7 C4' G A 118 23.646 14.389 60.034 1.00130.62 C
ATOM 8 O4' G A 118 22.320 14.908 60.328 1.00136.60 O
ATOM 9 C3' G A 118 24.132 15.143 58.797 1.00133.74 C
ATOM 10 O3' G A 118 23.772 14.410 57.628 1.00134.57 O
ATOM 11 C2' G A 118 23.316 16.430 58.851 1.00137.88 C
ATOM 12 O2' G A 118 23.156 17.083 57.607 1.00141.03 O
ATOM 13 C1' G A 118 21.988 15.920 59.394 1.00137.20 C
ATOM 14 N9 G A 118 21.198 16.944 60.082 1.00135.99 N
ATOM 15 C8 G A 118 21.620 17.771 61.099 1.00138.74 C
ATOM 16 N7 G A 118 20.703 18.598 61.518 1.00134.31 N
ATOM 17 C5 G A 118 19.613 18.300 60.718 1.00132.96 C
ATOM 18 C6 G A 118 18.326 18.877 60.717 1.00133.92 C
ATOM 19 O6 G A 118 17.898 19.788 61.442 1.00132.02 O
ATOM 20 N1 G A 118 17.523 18.281 59.748 1.00137.58 N
ATOM 21 C2 G A 118 17.907 17.264 58.899 1.00135.48 C
ATOM 22 N2 G A 118 16.970 16.831 58.040 1.00135.24 N
ATOM 23 N3 G A 118 19.113 16.715 58.891 1.00125.22 N
ATOM 24 C4 G A 118 19.900 17.285 59.824 1.00128.29 C
ATOM 25 P A A 119 24.904 13.906 56.607 1.00118.91 P
ATOM 26 OP1 A A 119 26.011 14.898 56.646 1.00104.73 O
ATOM 27 OP2 A A 119 24.226 13.636 55.309 1.00114.43 O
ATOM 28 O5' A A 119 25.380 12.541 57.266 1.00110.15 O
TER

ATOM 1 O3' U B 184 18.790 13.544 55.314 1.00117.43 O
ATOM 2 P G B 185 17.752 12.858 56.329 1.00126.37 P
ATOM 3 OP1 G B 185 17.377 11.534 55.750 1.00104.88 O
ATOM 4 OP2 G B 185 16.680 13.848 56.589 1.00121.39 O
ATOM 5 O5' G B 185 18.645 12.658 57.638 1.00131.55 O
ATOM 6 C5' G B 185 18.079 12.730 58.941 1.00130.86 C
ATOM 7 C4' G B 185 18.550 11.590 59.805 1.00131.22 C
ATOM 8 O4' G B 185 18.771 10.428 58.959 1.00132.96 O
ATOM 9 C3' G B 185 19.872 11.824 60.538 1.00136.33 C
ATOM 10 O3' G B 185 19.888 11.031 61.730 1.00142.50 O
ATOM 11 C2' G B 185 20.881 11.249 59.552 1.00136.06 C
ATOM 12 O2' G B 185 22.129 10.907 60.116 1.00135.07 O
ATOM 13 C1' G B 185 20.123 10.018 59.072 1.00138.26 C
ATOM 14 N9 G B 185 20.574 9.478 57.778 1.00139.43 N
ATOM 15 C8 G B 185 20.178 9.784 56.488 1.00135.55 C
ATOM 16 N7 G B 185 20.787 9.075 55.567 1.00128.65 N
ATOM 17 C5 G B 185 21.635 8.242 56.294 1.00135.19 C
ATOM 18 C6 G B 185 22.553 7.242 55.867 1.00130.40 C
ATOM 19 O6 G B 185 22.815 6.877 54.713 1.00127.57 O
ATOM 20 N1 G B 185 23.195 6.643 56.950 1.00120.77 N
ATOM 21 C2 G B 185 22.990 6.960 58.270 1.00119.97 C
ATOM 22 N2 G B 185 23.702 6.279 59.173 1.00123.16 N
ATOM 23 N3 G B 185 22.147 7.881 58.685 1.00122.73 N
ATOM 24 C4 G B 185 21.509 8.475 57.653 1.00132.51 C
ATOM 25 P G B 186 19.889 11.717 63.186 1.00129.74 P
ATOM 26 OP1 G B 186 21.160 11.334 63.850 1.00143.43 O
ATOM 27 OP2 G B 186 18.609 11.351 63.837 1.00157.68 O
ATOM 28 O5' G B 186 19.897 13.273 62.850 1.00134.17 O
TER

Atoms:
OP1: (25.978,18.010,61.582)
OP2: (26.717,16.070,63.075)
C3': (24.132,15.143,58.797)
C1': (21.988,15.920,59.394)
C5': (24.515,14.525,61.260)
O6: (17.898,19.788,61.442)
O4': (22.320,14.908,60.328)
C8: (21.620,17.771,61.099)
C2: (17.907,17.264,58.899)
C6: (18.326,18.877,60.717)
C5: (19.613,18.300,60.718)
C4: (19.900,17.285,59.824)
P: (26.072,16.549,61.827)
C4': (23.646,14.389,60.034)
C2': (23.316,16.430,58.851)
O2': (23.156,17.083,57.607)
N1: (17.523,18.281,59.748)
N2: (16.970,16.831,58.040)
N3: (19.113,16.715,58.891)
N7: (20.703,18.598,61.518)
N9: (21.198,16.944,60.082)
O5': (24.641,15.881,61.671)
O3': (23.772,14.410,57.628)
OP1: (17.377,11.534,55.750)
OP2: (16.680,13.848,56.589)
C3': (19.872,11.824,60.538)
C1': (20.123,10.018,59.072)
C5': (18.079,12.730,58.941)
O6: (22.815,6.877,54.713)
O4': (18.771,10.428,58.959)
C8: (20.178,9.784,56.488)
C2: (22.990,6.960,58.270)
C6: (22.553,7.242,55.867)
C5: (21.635,8.242,56.294)
C4: (21.509,8.475,57.653)
P: (17.752,12.858,56.329)
C4': (18.550,11.590,59.805)
C2': (20.881,11.249,59.552)
O2': (22.129,10.907,60.116)
N1: (23.195,6.643,56.950)
N2: (23.702,6.279,59.173)
N3: (22.147,7.881,58.685)
N7: (20.787,9.075,55.567)
N9: (20.574,9.478,57.778)
O5': (18.645,12.658,57.638)
O3': (19.888,11.031,61.730)
Image (generated by PyMOL):
PyMOL image
show in jmol