Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01283:0541
Extra
PDB:
ATOM 1 O3' G A1282 10.090 129.790 80.585 1.00 40.80 O
ATOM 2 P G A1283 10.105 128.194 80.758 1.00 41.01 P
ATOM 3 OP1 G A1283 9.562 127.949 82.109 1.00 42.43 O
ATOM 4 OP2 G A1283 11.447 127.675 80.394 1.00 40.24 O
ATOM 5 O5' G A1283 9.061 127.646 79.683 1.00 42.62 O
ATOM 6 C5' G A1283 7.643 127.853 79.854 1.00 42.23 C
ATOM 7 C4' G A1283 6.860 127.182 78.746 1.00 40.10 C
ATOM 8 O4' G A1283 7.280 127.707 77.457 1.00 40.00 O
ATOM 9 C3' G A1283 7.041 125.687 78.559 1.00 40.63 C
ATOM 10 O3' G A1283 6.334 124.900 79.502 1.00 41.91 O
ATOM 11 C2' G A1283 6.484 125.503 77.159 1.00 39.84 C
ATOM 12 O2' G A1283 5.081 125.622 77.124 1.00 42.20 O
ATOM 13 C1' G A1283 7.079 126.716 76.453 1.00 40.17 C
ATOM 14 N9 G A1283 8.361 126.357 75.849 1.00 39.87 N
ATOM 15 C8 G A1283 9.616 126.740 76.246 1.00 39.26 C
ATOM 16 N7 G A1283 10.564 126.218 75.517 1.00 39.94 N
ATOM 17 C5 G A1283 9.895 125.449 74.578 1.00 40.39 C
ATOM 18 C6 G A1283 10.396 124.640 73.517 1.00 41.75 C
ATOM 19 O6 G A1283 11.569 124.430 73.187 1.00 41.79 O
ATOM 20 N1 G A1283 9.365 124.040 72.810 1.00 42.45 N
ATOM 21 C2 G A1283 8.030 124.188 73.081 1.00 41.87 C
ATOM 22 N2 G A1283 7.190 123.523 72.278 1.00 43.77 N
ATOM 23 N3 G A1283 7.554 124.930 74.061 1.00 40.34 N
ATOM 24 C4 G A1283 8.535 125.529 74.764 1.00 40.03 C
ATOM 25 P G A1284 6.876 123.429 79.873 1.00 43.68 P
ATOM 26 OP1 G A1284 5.939 122.908 80.898 1.00 45.61 O
ATOM 27 OP2 G A1284 8.326 123.499 80.179 1.00 45.41 O
ATOM 28 O5' G A1284 6.730 122.573 78.536 1.00 40.33 O
TER
ATOM 1 O3' A B 540 2.956 124.961 72.419 1.00 42.86 O
ATOM 2 P G B 541 2.964 123.670 73.381 1.00 44.05 P
ATOM 3 OP1 G B 541 4.273 123.638 74.062 1.00 47.12 O
ATOM 4 OP2 G B 541 2.545 122.508 72.569 1.00 43.58 O
ATOM 5 O5' G B 541 1.835 123.932 74.479 1.00 43.96 O
ATOM 6 C5' G B 541 2.161 124.518 75.757 1.00 41.68 C
ATOM 7 C4' G B 541 2.140 123.469 76.855 1.00 42.44 C
ATOM 8 O4' G B 541 3.015 123.923 77.919 1.00 41.45 O
ATOM 9 C3' G B 541 0.810 123.172 77.553 1.00 42.92 C
ATOM 10 O3' G B 541 -0.004 122.204 76.882 1.00 46.04 O
ATOM 11 C2' G B 541 1.270 122.653 78.911 1.00 41.66 C
ATOM 12 O2' G B 541 1.685 121.300 78.903 1.00 39.52 O
ATOM 13 C1' G B 541 2.485 123.540 79.176 1.00 40.03 C
ATOM 14 N9 G B 541 2.156 124.750 79.918 1.00 36.57 N
ATOM 15 C8 G B 541 2.297 126.050 79.497 1.00 36.33 C
ATOM 16 N7 G B 541 1.944 126.922 80.400 1.00 36.54 N
ATOM 17 C5 G B 541 1.538 126.151 81.479 1.00 35.06 C
ATOM 18 C6 G B 541 1.058 126.540 82.756 1.00 35.59 C
ATOM 19 O6 G B 541 0.895 127.685 83.199 1.00 35.24 O
ATOM 20 N1 G B 541 0.760 125.434 83.550 1.00 34.33 N
ATOM 21 C2 G B 541 0.910 124.121 83.161 1.00 35.20 C
ATOM 22 N2 G B 541 0.579 123.185 84.063 1.00 34.28 N
ATOM 23 N3 G B 541 1.357 123.750 81.973 1.00 34.80 N
ATOM 24 C4 G B 541 1.652 124.808 81.192 1.00 35.13 C
ATOM 25 P G B 542 -1.607 122.197 77.108 1.00 47.41 P
ATOM 26 OP1 G B 542 -2.121 120.910 76.561 1.00 45.80 O
ATOM 27 OP2 G B 542 -2.160 123.478 76.604 1.00 45.77 O
ATOM 28 O5' G B 542 -1.801 122.167 78.690 1.00 46.42 O
TER
ATOM 2 P G A1283 10.105 128.194 80.758 1.00 41.01 P
ATOM 3 OP1 G A1283 9.562 127.949 82.109 1.00 42.43 O
ATOM 4 OP2 G A1283 11.447 127.675 80.394 1.00 40.24 O
ATOM 5 O5' G A1283 9.061 127.646 79.683 1.00 42.62 O
ATOM 6 C5' G A1283 7.643 127.853 79.854 1.00 42.23 C
ATOM 7 C4' G A1283 6.860 127.182 78.746 1.00 40.10 C
ATOM 8 O4' G A1283 7.280 127.707 77.457 1.00 40.00 O
ATOM 9 C3' G A1283 7.041 125.687 78.559 1.00 40.63 C
ATOM 10 O3' G A1283 6.334 124.900 79.502 1.00 41.91 O
ATOM 11 C2' G A1283 6.484 125.503 77.159 1.00 39.84 C
ATOM 12 O2' G A1283 5.081 125.622 77.124 1.00 42.20 O
ATOM 13 C1' G A1283 7.079 126.716 76.453 1.00 40.17 C
ATOM 14 N9 G A1283 8.361 126.357 75.849 1.00 39.87 N
ATOM 15 C8 G A1283 9.616 126.740 76.246 1.00 39.26 C
ATOM 16 N7 G A1283 10.564 126.218 75.517 1.00 39.94 N
ATOM 17 C5 G A1283 9.895 125.449 74.578 1.00 40.39 C
ATOM 18 C6 G A1283 10.396 124.640 73.517 1.00 41.75 C
ATOM 19 O6 G A1283 11.569 124.430 73.187 1.00 41.79 O
ATOM 20 N1 G A1283 9.365 124.040 72.810 1.00 42.45 N
ATOM 21 C2 G A1283 8.030 124.188 73.081 1.00 41.87 C
ATOM 22 N2 G A1283 7.190 123.523 72.278 1.00 43.77 N
ATOM 23 N3 G A1283 7.554 124.930 74.061 1.00 40.34 N
ATOM 24 C4 G A1283 8.535 125.529 74.764 1.00 40.03 C
ATOM 25 P G A1284 6.876 123.429 79.873 1.00 43.68 P
ATOM 26 OP1 G A1284 5.939 122.908 80.898 1.00 45.61 O
ATOM 27 OP2 G A1284 8.326 123.499 80.179 1.00 45.41 O
ATOM 28 O5' G A1284 6.730 122.573 78.536 1.00 40.33 O
TER
ATOM 1 O3' A B 540 2.956 124.961 72.419 1.00 42.86 O
ATOM 2 P G B 541 2.964 123.670 73.381 1.00 44.05 P
ATOM 3 OP1 G B 541 4.273 123.638 74.062 1.00 47.12 O
ATOM 4 OP2 G B 541 2.545 122.508 72.569 1.00 43.58 O
ATOM 5 O5' G B 541 1.835 123.932 74.479 1.00 43.96 O
ATOM 6 C5' G B 541 2.161 124.518 75.757 1.00 41.68 C
ATOM 7 C4' G B 541 2.140 123.469 76.855 1.00 42.44 C
ATOM 8 O4' G B 541 3.015 123.923 77.919 1.00 41.45 O
ATOM 9 C3' G B 541 0.810 123.172 77.553 1.00 42.92 C
ATOM 10 O3' G B 541 -0.004 122.204 76.882 1.00 46.04 O
ATOM 11 C2' G B 541 1.270 122.653 78.911 1.00 41.66 C
ATOM 12 O2' G B 541 1.685 121.300 78.903 1.00 39.52 O
ATOM 13 C1' G B 541 2.485 123.540 79.176 1.00 40.03 C
ATOM 14 N9 G B 541 2.156 124.750 79.918 1.00 36.57 N
ATOM 15 C8 G B 541 2.297 126.050 79.497 1.00 36.33 C
ATOM 16 N7 G B 541 1.944 126.922 80.400 1.00 36.54 N
ATOM 17 C5 G B 541 1.538 126.151 81.479 1.00 35.06 C
ATOM 18 C6 G B 541 1.058 126.540 82.756 1.00 35.59 C
ATOM 19 O6 G B 541 0.895 127.685 83.199 1.00 35.24 O
ATOM 20 N1 G B 541 0.760 125.434 83.550 1.00 34.33 N
ATOM 21 C2 G B 541 0.910 124.121 83.161 1.00 35.20 C
ATOM 22 N2 G B 541 0.579 123.185 84.063 1.00 34.28 N
ATOM 23 N3 G B 541 1.357 123.750 81.973 1.00 34.80 N
ATOM 24 C4 G B 541 1.652 124.808 81.192 1.00 35.13 C
ATOM 25 P G B 542 -1.607 122.197 77.108 1.00 47.41 P
ATOM 26 OP1 G B 542 -2.121 120.910 76.561 1.00 45.80 O
ATOM 27 OP2 G B 542 -2.160 123.478 76.604 1.00 45.77 O
ATOM 28 O5' G B 542 -1.801 122.167 78.690 1.00 46.42 O
TER
Atoms:
OP1: (9.562,127.949,82.109)
OP2: (11.447,127.675,80.394)
C3': (7.041,125.687,78.559)
C1': (7.079,126.716,76.453)
C5': (7.643,127.853,79.854)
O6: (11.569,124.430,73.187)
O4': (7.280,127.707,77.457)
C8: (9.616,126.740,76.246)
C2: (8.030,124.188,73.081)
C6: (10.396,124.640,73.517)
C5: (9.895,125.449,74.578)
C4: (8.535,125.529,74.764)
P: (10.105,128.194,80.758)
C4': (6.860,127.182,78.746)
C2': (6.484,125.503,77.159)
O2': (5.081,125.622,77.124)
N1: (9.365,124.040,72.810)
N2: (7.190,123.523,72.278)
N3: (7.554,124.930,74.061)
N7: (10.564,126.218,75.517)
N9: (8.361,126.357,75.849)
O5': (9.061,127.646,79.683)
O3': (6.334,124.900,79.502)
OP2: (11.447,127.675,80.394)
C3': (7.041,125.687,78.559)
C1': (7.079,126.716,76.453)
C5': (7.643,127.853,79.854)
O6: (11.569,124.430,73.187)
O4': (7.280,127.707,77.457)
C8: (9.616,126.740,76.246)
C2: (8.030,124.188,73.081)
C6: (10.396,124.640,73.517)
C5: (9.895,125.449,74.578)
C4: (8.535,125.529,74.764)
P: (10.105,128.194,80.758)
C4': (6.860,127.182,78.746)
C2': (6.484,125.503,77.159)
O2': (5.081,125.622,77.124)
N1: (9.365,124.040,72.810)
N2: (7.190,123.523,72.278)
N3: (7.554,124.930,74.061)
N7: (10.564,126.218,75.517)
N9: (8.361,126.357,75.849)
O5': (9.061,127.646,79.683)
O3': (6.334,124.900,79.502)
OP1: (4.273,123.638,74.062)
OP2: (2.545,122.508,72.569)
C3': (0.810,123.172,77.553)
C1': (2.485,123.540,79.176)
C5': (2.161,124.518,75.757)
O6: (0.895,127.685,83.199)
O4': (3.015,123.923,77.919)
C8: (2.297,126.050,79.497)
C2: (0.910,124.121,83.161)
C6: (1.058,126.540,82.756)
C5: (1.538,126.151,81.479)
C4: (1.652,124.808,81.192)
P: (2.964,123.670,73.381)
C4': (2.140,123.469,76.855)
C2': (1.270,122.653,78.911)
O2': (1.685,121.300,78.903)
N1: (0.760,125.434,83.550)
N2: (0.579,123.185,84.063)
N3: (1.357,123.750,81.973)
N7: (1.944,126.922,80.400)
N9: (2.156,124.750,79.918)
O5': (1.835,123.932,74.479)
O3': (-0.004,122.204,76.882)
OP2: (2.545,122.508,72.569)
C3': (0.810,123.172,77.553)
C1': (2.485,123.540,79.176)
C5': (2.161,124.518,75.757)
O6: (0.895,127.685,83.199)
O4': (3.015,123.923,77.919)
C8: (2.297,126.050,79.497)
C2: (0.910,124.121,83.161)
C6: (1.058,126.540,82.756)
C5: (1.538,126.151,81.479)
C4: (1.652,124.808,81.192)
P: (2.964,123.670,73.381)
C4': (2.140,123.469,76.855)
C2': (1.270,122.653,78.911)
O2': (1.685,121.300,78.903)
N1: (0.760,125.434,83.550)
N2: (0.579,123.185,84.063)
N3: (1.357,123.750,81.973)
N7: (1.944,126.922,80.400)
N9: (2.156,124.750,79.918)
O5': (1.835,123.932,74.479)
O3': (-0.004,122.204,76.882)
Image (generated by PyMOL):