Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12724:12090
Extra
PDB:
ATOM 1 O3' A A2723 7.405 -3.298 64.453 1.00120.27 O
ATOM 2 P G A2724 6.044 -4.011 64.938 1.00 67.44 P
ATOM 3 OP1 G A2724 6.263 -5.520 64.902 1.00 67.35 O
ATOM 4 OP2 G A2724 4.918 -3.406 64.122 1.00 67.69 O
ATOM 5 O5' G A2724 5.942 -3.526 66.455 1.00 67.44 O
ATOM 6 C5' G A2724 5.839 -2.152 66.762 1.00 67.52 C
ATOM 7 C4' G A2724 4.439 -1.809 67.144 1.00 67.78 C
ATOM 8 O4' G A2724 3.959 -2.739 68.148 1.00 67.80 O
ATOM 9 C3' G A2724 4.250 -0.467 67.784 1.00 67.89 C
ATOM 10 O3' G A2724 4.251 0.571 66.855 1.00 67.97 O
ATOM 11 C2' G A2724 2.936 -0.646 68.493 1.00 68.10 C
ATOM 12 O2' G A2724 1.880 -0.658 67.551 1.00 68.31 O
ATOM 13 C1' G A2724 3.104 -2.060 69.034 1.00 67.98 C
ATOM 14 N9 G A2724 3.734 -2.064 70.356 1.00 67.87 N
ATOM 15 C8 G A2724 5.009 -2.449 70.589 1.00 67.63 C
ATOM 16 N7 G A2724 5.318 -2.362 71.839 1.00 67.60 N
ATOM 17 C5 G A2724 4.185 -1.895 72.476 1.00 67.83 C
ATOM 18 C6 G A2724 3.951 -1.600 73.839 1.00 67.92 C
ATOM 19 O6 G A2724 4.714 -1.700 74.804 1.00 67.81 O
ATOM 20 N1 G A2724 2.668 -1.142 74.035 1.00 68.17 N
ATOM 21 C2 G A2724 1.743 -1.001 73.047 1.00 68.33 C
ATOM 22 N2 G A2724 0.561 -0.556 73.431 1.00 68.59 N
ATOM 23 N3 G A2724 1.940 -1.262 71.780 1.00 68.25 N
ATOM 24 C4 G A2724 3.188 -1.702 71.563 1.00 68.00 C
ATOM 25 P G A2725 4.607 2.043 67.345 1.00 51.58 P
ATOM 26 OP1 G A2725 4.522 2.937 66.163 1.00 51.69 O
ATOM 27 OP2 G A2725 5.885 1.981 68.112 1.00 51.35 O
ATOM 28 O5' G A2725 3.412 2.355 68.346 1.00 51.81 O
TER
ATOM 1 O3' U B2089 -3.289 -0.613 72.891 1.00 50.50 O
ATOM 2 P G B2090 -2.691 -0.875 71.415 1.00 44.08 P
ATOM 3 OP1 G B2090 -2.477 -2.294 71.273 1.00 43.95 O
ATOM 4 OP2 G B2090 -1.545 0.027 71.227 1.00 43.91 O
ATOM 5 O5' G B2090 -3.850 -0.424 70.464 1.00 44.35 O
ATOM 6 C5' G B2090 -4.944 -1.261 70.173 1.00 44.53 C
ATOM 7 C4' G B2090 -5.204 -1.282 68.700 1.00 44.60 C
ATOM 8 O4' G B2090 -6.602 -1.560 68.448 1.00 44.89 O
ATOM 9 C3' G B2090 -4.896 0.006 67.949 1.00 44.63 C
ATOM 10 O3' G B2090 -4.520 -0.367 66.648 1.00 44.55 O
ATOM 11 C2' G B2090 -6.270 0.644 67.844 1.00 44.98 C
ATOM 12 O2' G B2090 -6.385 1.583 66.802 1.00 45.10 O
ATOM 13 C1' G B2090 -7.098 -0.590 67.559 1.00 45.08 C
ATOM 14 N9 G B2090 -8.536 -0.456 67.782 1.00 45.42 N
ATOM 15 C8 G B2090 -9.240 -0.175 68.925 1.00 45.59 C
ATOM 16 N7 G B2090 -10.527 -0.205 68.781 1.00 45.90 N
ATOM 17 C5 G B2090 -10.674 -0.560 67.457 1.00 45.93 C
ATOM 18 C6 G B2090 -11.853 -0.738 66.716 1.00 46.23 C
ATOM 19 O6 G B2090 -12.982 -0.593 67.186 1.00 46.52 O
ATOM 20 N1 G B2090 -11.558 -1.099 65.397 1.00 46.18 N
ATOM 21 C2 G B2090 -10.276 -1.240 64.916 1.00 45.87 C
ATOM 22 N2 G B2090 -10.067 -1.561 63.655 1.00 45.86 N
ATOM 23 N3 G B2090 -9.187 -1.066 65.590 1.00 45.59 N
ATOM 24 C4 G B2090 -9.466 -0.732 66.845 1.00 45.65 C
ATOM 25 P C B2091 -3.298 0.309 65.866 1.00 50.30 P
ATOM 26 OP1 C B2091 -2.482 1.064 66.871 1.00 50.16 O
ATOM 27 OP2 C B2091 -3.884 1.058 64.686 1.00 50.52 O
ATOM 28 O5' C B2091 -2.542 -0.998 65.396 1.00 50.06 O
TER
ATOM 2 P G A2724 6.044 -4.011 64.938 1.00 67.44 P
ATOM 3 OP1 G A2724 6.263 -5.520 64.902 1.00 67.35 O
ATOM 4 OP2 G A2724 4.918 -3.406 64.122 1.00 67.69 O
ATOM 5 O5' G A2724 5.942 -3.526 66.455 1.00 67.44 O
ATOM 6 C5' G A2724 5.839 -2.152 66.762 1.00 67.52 C
ATOM 7 C4' G A2724 4.439 -1.809 67.144 1.00 67.78 C
ATOM 8 O4' G A2724 3.959 -2.739 68.148 1.00 67.80 O
ATOM 9 C3' G A2724 4.250 -0.467 67.784 1.00 67.89 C
ATOM 10 O3' G A2724 4.251 0.571 66.855 1.00 67.97 O
ATOM 11 C2' G A2724 2.936 -0.646 68.493 1.00 68.10 C
ATOM 12 O2' G A2724 1.880 -0.658 67.551 1.00 68.31 O
ATOM 13 C1' G A2724 3.104 -2.060 69.034 1.00 67.98 C
ATOM 14 N9 G A2724 3.734 -2.064 70.356 1.00 67.87 N
ATOM 15 C8 G A2724 5.009 -2.449 70.589 1.00 67.63 C
ATOM 16 N7 G A2724 5.318 -2.362 71.839 1.00 67.60 N
ATOM 17 C5 G A2724 4.185 -1.895 72.476 1.00 67.83 C
ATOM 18 C6 G A2724 3.951 -1.600 73.839 1.00 67.92 C
ATOM 19 O6 G A2724 4.714 -1.700 74.804 1.00 67.81 O
ATOM 20 N1 G A2724 2.668 -1.142 74.035 1.00 68.17 N
ATOM 21 C2 G A2724 1.743 -1.001 73.047 1.00 68.33 C
ATOM 22 N2 G A2724 0.561 -0.556 73.431 1.00 68.59 N
ATOM 23 N3 G A2724 1.940 -1.262 71.780 1.00 68.25 N
ATOM 24 C4 G A2724 3.188 -1.702 71.563 1.00 68.00 C
ATOM 25 P G A2725 4.607 2.043 67.345 1.00 51.58 P
ATOM 26 OP1 G A2725 4.522 2.937 66.163 1.00 51.69 O
ATOM 27 OP2 G A2725 5.885 1.981 68.112 1.00 51.35 O
ATOM 28 O5' G A2725 3.412 2.355 68.346 1.00 51.81 O
TER
ATOM 1 O3' U B2089 -3.289 -0.613 72.891 1.00 50.50 O
ATOM 2 P G B2090 -2.691 -0.875 71.415 1.00 44.08 P
ATOM 3 OP1 G B2090 -2.477 -2.294 71.273 1.00 43.95 O
ATOM 4 OP2 G B2090 -1.545 0.027 71.227 1.00 43.91 O
ATOM 5 O5' G B2090 -3.850 -0.424 70.464 1.00 44.35 O
ATOM 6 C5' G B2090 -4.944 -1.261 70.173 1.00 44.53 C
ATOM 7 C4' G B2090 -5.204 -1.282 68.700 1.00 44.60 C
ATOM 8 O4' G B2090 -6.602 -1.560 68.448 1.00 44.89 O
ATOM 9 C3' G B2090 -4.896 0.006 67.949 1.00 44.63 C
ATOM 10 O3' G B2090 -4.520 -0.367 66.648 1.00 44.55 O
ATOM 11 C2' G B2090 -6.270 0.644 67.844 1.00 44.98 C
ATOM 12 O2' G B2090 -6.385 1.583 66.802 1.00 45.10 O
ATOM 13 C1' G B2090 -7.098 -0.590 67.559 1.00 45.08 C
ATOM 14 N9 G B2090 -8.536 -0.456 67.782 1.00 45.42 N
ATOM 15 C8 G B2090 -9.240 -0.175 68.925 1.00 45.59 C
ATOM 16 N7 G B2090 -10.527 -0.205 68.781 1.00 45.90 N
ATOM 17 C5 G B2090 -10.674 -0.560 67.457 1.00 45.93 C
ATOM 18 C6 G B2090 -11.853 -0.738 66.716 1.00 46.23 C
ATOM 19 O6 G B2090 -12.982 -0.593 67.186 1.00 46.52 O
ATOM 20 N1 G B2090 -11.558 -1.099 65.397 1.00 46.18 N
ATOM 21 C2 G B2090 -10.276 -1.240 64.916 1.00 45.87 C
ATOM 22 N2 G B2090 -10.067 -1.561 63.655 1.00 45.86 N
ATOM 23 N3 G B2090 -9.187 -1.066 65.590 1.00 45.59 N
ATOM 24 C4 G B2090 -9.466 -0.732 66.845 1.00 45.65 C
ATOM 25 P C B2091 -3.298 0.309 65.866 1.00 50.30 P
ATOM 26 OP1 C B2091 -2.482 1.064 66.871 1.00 50.16 O
ATOM 27 OP2 C B2091 -3.884 1.058 64.686 1.00 50.52 O
ATOM 28 O5' C B2091 -2.542 -0.998 65.396 1.00 50.06 O
TER
Atoms:
OP1: (6.263,-5.520,64.902)
OP2: (4.918,-3.406,64.122)
C3': (4.250,-0.467,67.784)
C1': (3.104,-2.060,69.034)
C5': (5.839,-2.152,66.762)
O6: (4.714,-1.700,74.804)
O4': (3.959,-2.739,68.148)
C8: (5.009,-2.449,70.589)
C2: (1.743,-1.001,73.047)
C6: (3.951,-1.600,73.839)
C5: (4.185,-1.895,72.476)
C4: (3.188,-1.702,71.563)
P: (6.044,-4.011,64.938)
C4': (4.439,-1.809,67.144)
C2': (2.936,-0.646,68.493)
O2': (1.880,-0.658,67.551)
N1: (2.668,-1.142,74.035)
N2: (0.561,-0.556,73.431)
N3: (1.940,-1.262,71.780)
N7: (5.318,-2.362,71.839)
N9: (3.734,-2.064,70.356)
O5': (5.942,-3.526,66.455)
O3': (4.251,0.571,66.855)
OP2: (4.918,-3.406,64.122)
C3': (4.250,-0.467,67.784)
C1': (3.104,-2.060,69.034)
C5': (5.839,-2.152,66.762)
O6: (4.714,-1.700,74.804)
O4': (3.959,-2.739,68.148)
C8: (5.009,-2.449,70.589)
C2: (1.743,-1.001,73.047)
C6: (3.951,-1.600,73.839)
C5: (4.185,-1.895,72.476)
C4: (3.188,-1.702,71.563)
P: (6.044,-4.011,64.938)
C4': (4.439,-1.809,67.144)
C2': (2.936,-0.646,68.493)
O2': (1.880,-0.658,67.551)
N1: (2.668,-1.142,74.035)
N2: (0.561,-0.556,73.431)
N3: (1.940,-1.262,71.780)
N7: (5.318,-2.362,71.839)
N9: (3.734,-2.064,70.356)
O5': (5.942,-3.526,66.455)
O3': (4.251,0.571,66.855)
OP1: (-2.477,-2.294,71.273)
OP2: (-1.545,0.027,71.227)
C3': (-4.896,0.006,67.949)
C1': (-7.098,-0.590,67.559)
C5': (-4.944,-1.261,70.173)
O6: (-12.982,-0.593,67.186)
O4': (-6.602,-1.560,68.448)
C8: (-9.240,-0.175,68.925)
C2: (-10.276,-1.240,64.916)
C6: (-11.853,-0.738,66.716)
C5: (-10.674,-0.560,67.457)
C4: (-9.466,-0.732,66.845)
P: (-2.691,-0.875,71.415)
C4': (-5.204,-1.282,68.700)
C2': (-6.270,0.644,67.844)
O2': (-6.385,1.583,66.802)
N1: (-11.558,-1.099,65.397)
N2: (-10.067,-1.561,63.655)
N3: (-9.187,-1.066,65.590)
N7: (-10.527,-0.205,68.781)
N9: (-8.536,-0.456,67.782)
O5': (-3.850,-0.424,70.464)
O3': (-4.520,-0.367,66.648)
OP2: (-1.545,0.027,71.227)
C3': (-4.896,0.006,67.949)
C1': (-7.098,-0.590,67.559)
C5': (-4.944,-1.261,70.173)
O6: (-12.982,-0.593,67.186)
O4': (-6.602,-1.560,68.448)
C8: (-9.240,-0.175,68.925)
C2: (-10.276,-1.240,64.916)
C6: (-11.853,-0.738,66.716)
C5: (-10.674,-0.560,67.457)
C4: (-9.466,-0.732,66.845)
P: (-2.691,-0.875,71.415)
C4': (-5.204,-1.282,68.700)
C2': (-6.270,0.644,67.844)
O2': (-6.385,1.583,66.802)
N1: (-11.558,-1.099,65.397)
N2: (-10.067,-1.561,63.655)
N3: (-9.187,-1.066,65.590)
N7: (-10.527,-0.205,68.781)
N9: (-8.536,-0.456,67.782)
O5': (-3.850,-0.424,70.464)
O3': (-4.520,-0.367,66.648)
Image (generated by PyMOL):