Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01352:01683
Extra
PDB:
ATOM 1 O3' A A1351 47.876 177.968 86.554 1.00 53.69 O
ATOM 2 P A A1352 47.542 177.315 87.985 1.00 56.78 P
ATOM 3 OP1 A A1352 46.954 175.977 87.750 1.00 55.71 O
ATOM 4 OP2 A A1352 46.789 178.311 88.793 1.00 56.62 O
ATOM 5 O5' A A1352 48.962 177.134 88.670 1.00 53.31 O
ATOM 6 C5' A A1352 49.613 178.247 89.291 1.00 52.35 C
ATOM 7 C4' A A1352 51.069 177.936 89.509 1.00 52.58 C
ATOM 8 O4' A A1352 51.202 176.886 90.496 1.00 52.85 O
ATOM 9 C3' A A1352 51.786 177.410 88.284 1.00 50.50 C
ATOM 10 O3' A A1352 52.241 178.494 87.510 1.00 48.27 O
ATOM 11 C2' A A1352 52.932 176.621 88.889 1.00 51.45 C
ATOM 12 O2' A A1352 53.969 177.472 89.324 1.00 51.53 O
ATOM 13 C1' A A1352 52.258 176.023 90.126 1.00 52.69 C
ATOM 14 N9 A A1352 51.698 174.684 89.962 1.00 53.30 N
ATOM 15 C8 A A1352 50.377 174.323 90.093 1.00 54.71 C
ATOM 16 N7 A A1352 50.166 173.035 89.979 1.00 55.72 N
ATOM 17 C5 A A1352 51.429 172.513 89.741 1.00 53.67 C
ATOM 18 C6 A A1352 51.873 171.213 89.557 1.00 52.30 C
ATOM 19 N6 A A1352 51.064 170.160 89.598 1.00 51.90 N
ATOM 20 N1 A A1352 53.190 171.023 89.333 1.00 53.28 N
ATOM 21 C2 A A1352 53.998 172.089 89.305 1.00 52.21 C
ATOM 22 N3 A A1352 53.699 173.369 89.475 1.00 52.18 N
ATOM 23 C4 A A1352 52.380 173.518 89.698 1.00 53.58 C
ATOM 24 P C A1353 51.783 178.624 85.985 1.00 49.64 P
ATOM 25 OP1 C A1353 51.812 180.064 85.653 1.00 49.90 O
ATOM 26 OP2 C A1353 50.518 177.856 85.817 1.00 49.82 O
ATOM 27 O5' C A1353 52.958 177.909 85.183 1.00 48.07 O
TER
ATOM 1 O3' U B1682 60.162 165.553 86.852 1.00 44.24 O
ATOM 2 P C B1683 59.000 164.519 86.498 1.00 43.72 P
ATOM 3 OP1 C B1683 59.173 163.353 87.390 1.00 46.29 O
ATOM 4 OP2 C B1683 58.996 164.334 85.033 1.00 43.56 O
ATOM 5 O5' C B1683 57.666 165.264 86.922 1.00 44.27 O
ATOM 6 C5' C B1683 57.474 165.693 88.276 1.00 44.62 C
ATOM 7 C4' C B1683 56.379 166.722 88.333 1.00 44.78 C
ATOM 8 O4' C B1683 55.094 166.062 88.187 1.00 45.14 O
ATOM 9 C3' C B1683 56.229 167.453 89.650 1.00 44.28 C
ATOM 10 O3' C B1683 57.194 168.482 89.765 1.00 46.54 O
ATOM 11 C2' C B1683 54.805 167.977 89.541 1.00 43.30 C
ATOM 12 O2' C B1683 54.680 169.058 88.639 1.00 43.65 O
ATOM 13 C1' C B1683 54.111 166.771 88.920 1.00 41.80 C
ATOM 14 N1 C B1683 53.567 165.888 89.951 1.00 38.83 N
ATOM 15 C2 C B1683 52.305 166.158 90.447 1.00 39.78 C
ATOM 16 O2 C B1683 51.670 167.099 89.971 1.00 41.08 O
ATOM 17 N3 C B1683 51.804 165.396 91.431 1.00 39.50 N
ATOM 18 C4 C B1683 52.519 164.390 91.917 1.00 39.76 C
ATOM 19 N4 C B1683 51.995 163.683 92.906 1.00 43.80 N
ATOM 20 C5 C B1683 53.806 164.070 91.413 1.00 40.54 C
ATOM 21 C6 C B1683 54.287 164.837 90.435 1.00 39.26 C
ATOM 22 P G B1684 57.417 169.197 91.180 1.00 47.17 P
ATOM 23 OP1 G B1684 58.532 170.164 91.007 1.00 47.54 O
ATOM 24 OP2 G B1684 57.519 168.138 92.222 1.00 46.44 O
ATOM 25 O5' G B1684 56.062 170.010 91.367 1.00 45.56 O
TER
ATOM 2 P A A1352 47.542 177.315 87.985 1.00 56.78 P
ATOM 3 OP1 A A1352 46.954 175.977 87.750 1.00 55.71 O
ATOM 4 OP2 A A1352 46.789 178.311 88.793 1.00 56.62 O
ATOM 5 O5' A A1352 48.962 177.134 88.670 1.00 53.31 O
ATOM 6 C5' A A1352 49.613 178.247 89.291 1.00 52.35 C
ATOM 7 C4' A A1352 51.069 177.936 89.509 1.00 52.58 C
ATOM 8 O4' A A1352 51.202 176.886 90.496 1.00 52.85 O
ATOM 9 C3' A A1352 51.786 177.410 88.284 1.00 50.50 C
ATOM 10 O3' A A1352 52.241 178.494 87.510 1.00 48.27 O
ATOM 11 C2' A A1352 52.932 176.621 88.889 1.00 51.45 C
ATOM 12 O2' A A1352 53.969 177.472 89.324 1.00 51.53 O
ATOM 13 C1' A A1352 52.258 176.023 90.126 1.00 52.69 C
ATOM 14 N9 A A1352 51.698 174.684 89.962 1.00 53.30 N
ATOM 15 C8 A A1352 50.377 174.323 90.093 1.00 54.71 C
ATOM 16 N7 A A1352 50.166 173.035 89.979 1.00 55.72 N
ATOM 17 C5 A A1352 51.429 172.513 89.741 1.00 53.67 C
ATOM 18 C6 A A1352 51.873 171.213 89.557 1.00 52.30 C
ATOM 19 N6 A A1352 51.064 170.160 89.598 1.00 51.90 N
ATOM 20 N1 A A1352 53.190 171.023 89.333 1.00 53.28 N
ATOM 21 C2 A A1352 53.998 172.089 89.305 1.00 52.21 C
ATOM 22 N3 A A1352 53.699 173.369 89.475 1.00 52.18 N
ATOM 23 C4 A A1352 52.380 173.518 89.698 1.00 53.58 C
ATOM 24 P C A1353 51.783 178.624 85.985 1.00 49.64 P
ATOM 25 OP1 C A1353 51.812 180.064 85.653 1.00 49.90 O
ATOM 26 OP2 C A1353 50.518 177.856 85.817 1.00 49.82 O
ATOM 27 O5' C A1353 52.958 177.909 85.183 1.00 48.07 O
TER
ATOM 1 O3' U B1682 60.162 165.553 86.852 1.00 44.24 O
ATOM 2 P C B1683 59.000 164.519 86.498 1.00 43.72 P
ATOM 3 OP1 C B1683 59.173 163.353 87.390 1.00 46.29 O
ATOM 4 OP2 C B1683 58.996 164.334 85.033 1.00 43.56 O
ATOM 5 O5' C B1683 57.666 165.264 86.922 1.00 44.27 O
ATOM 6 C5' C B1683 57.474 165.693 88.276 1.00 44.62 C
ATOM 7 C4' C B1683 56.379 166.722 88.333 1.00 44.78 C
ATOM 8 O4' C B1683 55.094 166.062 88.187 1.00 45.14 O
ATOM 9 C3' C B1683 56.229 167.453 89.650 1.00 44.28 C
ATOM 10 O3' C B1683 57.194 168.482 89.765 1.00 46.54 O
ATOM 11 C2' C B1683 54.805 167.977 89.541 1.00 43.30 C
ATOM 12 O2' C B1683 54.680 169.058 88.639 1.00 43.65 O
ATOM 13 C1' C B1683 54.111 166.771 88.920 1.00 41.80 C
ATOM 14 N1 C B1683 53.567 165.888 89.951 1.00 38.83 N
ATOM 15 C2 C B1683 52.305 166.158 90.447 1.00 39.78 C
ATOM 16 O2 C B1683 51.670 167.099 89.971 1.00 41.08 O
ATOM 17 N3 C B1683 51.804 165.396 91.431 1.00 39.50 N
ATOM 18 C4 C B1683 52.519 164.390 91.917 1.00 39.76 C
ATOM 19 N4 C B1683 51.995 163.683 92.906 1.00 43.80 N
ATOM 20 C5 C B1683 53.806 164.070 91.413 1.00 40.54 C
ATOM 21 C6 C B1683 54.287 164.837 90.435 1.00 39.26 C
ATOM 22 P G B1684 57.417 169.197 91.180 1.00 47.17 P
ATOM 23 OP1 G B1684 58.532 170.164 91.007 1.00 47.54 O
ATOM 24 OP2 G B1684 57.519 168.138 92.222 1.00 46.44 O
ATOM 25 O5' G B1684 56.062 170.010 91.367 1.00 45.56 O
TER
Atoms:
OP1: (46.954,175.977,87.750)
OP2: (46.789,178.311,88.793)
C3': (51.786,177.410,88.284)
C1': (52.258,176.023,90.126)
C5': (49.613,178.247,89.291)
O4': (51.202,176.886,90.496)
C8: (50.377,174.323,90.093)
O2': (53.969,177.472,89.324)
C6: (51.873,171.213,89.557)
C5: (51.429,172.513,89.741)
C4: (52.380,173.518,89.698)
P: (47.542,177.315,87.985)
C4': (51.069,177.936,89.509)
C2': (52.932,176.621,88.889)
C2: (53.998,172.089,89.305)
N1: (53.190,171.023,89.333)
N3: (53.699,173.369,89.475)
N6: (51.064,170.160,89.598)
N7: (50.166,173.035,89.979)
N9: (51.698,174.684,89.962)
O5': (48.962,177.134,88.670)
O3': (52.241,178.494,87.510)
OP2: (46.789,178.311,88.793)
C3': (51.786,177.410,88.284)
C1': (52.258,176.023,90.126)
C5': (49.613,178.247,89.291)
O4': (51.202,176.886,90.496)
C8: (50.377,174.323,90.093)
O2': (53.969,177.472,89.324)
C6: (51.873,171.213,89.557)
C5: (51.429,172.513,89.741)
C4: (52.380,173.518,89.698)
P: (47.542,177.315,87.985)
C4': (51.069,177.936,89.509)
C2': (52.932,176.621,88.889)
C2: (53.998,172.089,89.305)
N1: (53.190,171.023,89.333)
N3: (53.699,173.369,89.475)
N6: (51.064,170.160,89.598)
N7: (50.166,173.035,89.979)
N9: (51.698,174.684,89.962)
O5': (48.962,177.134,88.670)
O3': (52.241,178.494,87.510)
C2: (52.305,166.158,90.447)
OP1: (59.173,163.353,87.390)
OP2: (58.996,164.334,85.033)
C4: (52.519,164.390,91.917)
O5': (57.666,165.264,86.922)
C3': (56.229,167.453,89.650)
C1': (54.111,166.771,88.920)
O4': (55.094,166.062,88.187)
C5': (57.474,165.693,88.276)
P: (59.000,164.519,86.498)
O2: (51.670,167.099,89.971)
C4': (56.379,166.722,88.333)
C2': (54.805,167.977,89.541)
O2': (54.680,169.058,88.639)
N1: (53.567,165.888,89.951)
N3: (51.804,165.396,91.431)
N4: (51.995,163.683,92.906)
C6: (54.287,164.837,90.435)
C5: (53.806,164.070,91.413)
O3': (57.194,168.482,89.765)
OP1: (59.173,163.353,87.390)
OP2: (58.996,164.334,85.033)
C4: (52.519,164.390,91.917)
O5': (57.666,165.264,86.922)
C3': (56.229,167.453,89.650)
C1': (54.111,166.771,88.920)
O4': (55.094,166.062,88.187)
C5': (57.474,165.693,88.276)
P: (59.000,164.519,86.498)
O2: (51.670,167.099,89.971)
C4': (56.379,166.722,88.333)
C2': (54.805,167.977,89.541)
O2': (54.680,169.058,88.639)
N1: (53.567,165.888,89.951)
N3: (51.804,165.396,91.431)
N4: (51.995,163.683,92.906)
C6: (54.287,164.837,90.435)
C5: (53.806,164.070,91.413)
O3': (57.194,168.482,89.765)
Image (generated by PyMOL):