Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1082:A2368
Extra
PDB:
ATOM 1 O3' A A1081 110.504 -68.768 22.933 1.00 57.20 O
ATOM 2 P A A1082 109.051 -69.321 22.501 1.00 58.16 P
ATOM 3 OP1 A A1082 108.353 -69.470 23.797 1.00 42.26 O
ATOM 4 OP2 A A1082 109.186 -70.509 21.609 1.00 58.39 O
ATOM 5 O5' A A1082 108.372 -68.083 21.742 1.00 58.58 O
ATOM 6 C5' A A1082 107.468 -68.274 20.651 1.00 54.01 C
ATOM 7 C4' A A1082 106.237 -67.400 20.809 1.00 47.88 C
ATOM 8 O4' A A1082 106.591 -65.997 20.935 1.00 49.67 O
ATOM 9 C3' A A1082 105.305 -67.421 19.606 1.00 51.44 C
ATOM 10 O3' A A1082 104.436 -68.538 19.666 1.00 61.40 O
ATOM 11 C2' A A1082 104.535 -66.116 19.735 1.00 51.96 C
ATOM 12 O2' A A1082 103.490 -66.216 20.656 1.00 57.39 O
ATOM 13 C1' A A1082 105.558 -65.200 20.392 1.00 47.37 C
ATOM 14 N9 A A1082 106.106 -64.134 19.549 1.00 48.98 N
ATOM 15 C8 A A1082 106.365 -64.112 18.194 1.00 49.35 C
ATOM 16 N7 A A1082 106.778 -62.945 17.753 1.00 45.93 N
ATOM 17 C5 A A1082 106.806 -62.152 18.888 1.00 46.42 C
ATOM 18 C6 A A1082 107.128 -60.805 19.091 1.00 38.92 C
ATOM 19 N6 A A1082 107.484 -59.977 18.112 1.00 37.75 N
ATOM 20 N1 A A1082 107.065 -60.325 20.350 1.00 36.72 N
ATOM 21 C2 A A1082 106.695 -61.153 21.335 1.00 37.93 C
ATOM 22 N3 A A1082 106.353 -62.434 21.271 1.00 45.71 N
ATOM 23 C4 A A1082 106.425 -62.878 20.005 1.00 49.42 C
ATOM 24 P A A1083 103.988 -69.257 18.299 1.00 78.99 P
ATOM 25 OP1 A A1083 104.727 -70.545 18.155 1.00 64.87 O
ATOM 26 OP2 A A1083 104.107 -68.224 17.234 1.00 62.92 O
ATOM 27 O5' A A1083 102.437 -69.549 18.564 1.00 61.76 O
TER
ATOM 1 O3' U B2367 104.534 -51.701 18.062 1.00 50.49 O
ATOM 2 P C B2368 105.686 -51.208 19.090 1.00 52.82 P
ATOM 3 OP1 C B2368 105.039 -50.512 20.223 1.00 48.73 O
ATOM 4 OP2 C B2368 106.719 -50.486 18.295 1.00 46.36 O
ATOM 5 O5' C B2368 106.309 -52.564 19.670 1.00 50.40 O
ATOM 6 C5' C B2368 105.491 -53.504 20.375 1.00 45.23 C
ATOM 7 C4' C B2368 106.033 -54.921 20.249 1.00 43.80 C
ATOM 8 O4' C B2368 106.157 -55.270 18.844 1.00 42.56 O
ATOM 9 C3' C B2368 107.413 -55.239 20.809 1.00 43.73 C
ATOM 10 O3' C B2368 107.418 -55.495 22.205 1.00 42.91 O
ATOM 11 C2' C B2368 107.808 -56.495 20.043 1.00 43.10 C
ATOM 12 O2' C B2368 107.310 -57.693 20.588 1.00 45.45 O
ATOM 13 C1' C B2368 107.173 -56.248 18.680 1.00 44.29 C
ATOM 14 N1 C B2368 108.197 -55.760 17.744 1.00 48.22 N
ATOM 15 C2 C B2368 109.200 -56.649 17.344 1.00 45.22 C
ATOM 16 O2 C B2368 109.148 -57.822 17.727 1.00 42.64 O
ATOM 17 N3 C B2368 110.200 -56.209 16.559 1.00 50.09 N
ATOM 18 C4 C B2368 110.229 -54.937 16.170 1.00 51.95 C
ATOM 19 N4 C B2368 111.259 -54.544 15.434 1.00 53.28 N
ATOM 20 C5 C B2368 109.202 -54.014 16.524 1.00 55.50 C
ATOM 21 C6 C B2368 108.207 -54.467 17.299 1.00 55.19 C
ATOM 22 P C B2369 108.793 -55.330 23.034 1.00 58.69 P
ATOM 23 OP1 C B2369 108.445 -55.647 24.451 1.00 57.59 O
ATOM 24 OP2 C B2369 109.420 -54.012 22.692 1.00 38.31 O
ATOM 25 O5' C B2369 109.761 -56.465 22.456 1.00 57.59 O
TER
ATOM 2 P A A1082 109.051 -69.321 22.501 1.00 58.16 P
ATOM 3 OP1 A A1082 108.353 -69.470 23.797 1.00 42.26 O
ATOM 4 OP2 A A1082 109.186 -70.509 21.609 1.00 58.39 O
ATOM 5 O5' A A1082 108.372 -68.083 21.742 1.00 58.58 O
ATOM 6 C5' A A1082 107.468 -68.274 20.651 1.00 54.01 C
ATOM 7 C4' A A1082 106.237 -67.400 20.809 1.00 47.88 C
ATOM 8 O4' A A1082 106.591 -65.997 20.935 1.00 49.67 O
ATOM 9 C3' A A1082 105.305 -67.421 19.606 1.00 51.44 C
ATOM 10 O3' A A1082 104.436 -68.538 19.666 1.00 61.40 O
ATOM 11 C2' A A1082 104.535 -66.116 19.735 1.00 51.96 C
ATOM 12 O2' A A1082 103.490 -66.216 20.656 1.00 57.39 O
ATOM 13 C1' A A1082 105.558 -65.200 20.392 1.00 47.37 C
ATOM 14 N9 A A1082 106.106 -64.134 19.549 1.00 48.98 N
ATOM 15 C8 A A1082 106.365 -64.112 18.194 1.00 49.35 C
ATOM 16 N7 A A1082 106.778 -62.945 17.753 1.00 45.93 N
ATOM 17 C5 A A1082 106.806 -62.152 18.888 1.00 46.42 C
ATOM 18 C6 A A1082 107.128 -60.805 19.091 1.00 38.92 C
ATOM 19 N6 A A1082 107.484 -59.977 18.112 1.00 37.75 N
ATOM 20 N1 A A1082 107.065 -60.325 20.350 1.00 36.72 N
ATOM 21 C2 A A1082 106.695 -61.153 21.335 1.00 37.93 C
ATOM 22 N3 A A1082 106.353 -62.434 21.271 1.00 45.71 N
ATOM 23 C4 A A1082 106.425 -62.878 20.005 1.00 49.42 C
ATOM 24 P A A1083 103.988 -69.257 18.299 1.00 78.99 P
ATOM 25 OP1 A A1083 104.727 -70.545 18.155 1.00 64.87 O
ATOM 26 OP2 A A1083 104.107 -68.224 17.234 1.00 62.92 O
ATOM 27 O5' A A1083 102.437 -69.549 18.564 1.00 61.76 O
TER
ATOM 1 O3' U B2367 104.534 -51.701 18.062 1.00 50.49 O
ATOM 2 P C B2368 105.686 -51.208 19.090 1.00 52.82 P
ATOM 3 OP1 C B2368 105.039 -50.512 20.223 1.00 48.73 O
ATOM 4 OP2 C B2368 106.719 -50.486 18.295 1.00 46.36 O
ATOM 5 O5' C B2368 106.309 -52.564 19.670 1.00 50.40 O
ATOM 6 C5' C B2368 105.491 -53.504 20.375 1.00 45.23 C
ATOM 7 C4' C B2368 106.033 -54.921 20.249 1.00 43.80 C
ATOM 8 O4' C B2368 106.157 -55.270 18.844 1.00 42.56 O
ATOM 9 C3' C B2368 107.413 -55.239 20.809 1.00 43.73 C
ATOM 10 O3' C B2368 107.418 -55.495 22.205 1.00 42.91 O
ATOM 11 C2' C B2368 107.808 -56.495 20.043 1.00 43.10 C
ATOM 12 O2' C B2368 107.310 -57.693 20.588 1.00 45.45 O
ATOM 13 C1' C B2368 107.173 -56.248 18.680 1.00 44.29 C
ATOM 14 N1 C B2368 108.197 -55.760 17.744 1.00 48.22 N
ATOM 15 C2 C B2368 109.200 -56.649 17.344 1.00 45.22 C
ATOM 16 O2 C B2368 109.148 -57.822 17.727 1.00 42.64 O
ATOM 17 N3 C B2368 110.200 -56.209 16.559 1.00 50.09 N
ATOM 18 C4 C B2368 110.229 -54.937 16.170 1.00 51.95 C
ATOM 19 N4 C B2368 111.259 -54.544 15.434 1.00 53.28 N
ATOM 20 C5 C B2368 109.202 -54.014 16.524 1.00 55.50 C
ATOM 21 C6 C B2368 108.207 -54.467 17.299 1.00 55.19 C
ATOM 22 P C B2369 108.793 -55.330 23.034 1.00 58.69 P
ATOM 23 OP1 C B2369 108.445 -55.647 24.451 1.00 57.59 O
ATOM 24 OP2 C B2369 109.420 -54.012 22.692 1.00 38.31 O
ATOM 25 O5' C B2369 109.761 -56.465 22.456 1.00 57.59 O
TER
Atoms:
OP1: (108.353,-69.470,23.797)
OP2: (109.186,-70.509,21.609)
C3': (105.305,-67.421,19.606)
C1': (105.558,-65.200,20.392)
C5': (107.468,-68.274,20.651)
O4': (106.591,-65.997,20.935)
C8: (106.365,-64.112,18.194)
O2': (103.490,-66.216,20.656)
C6: (107.128,-60.805,19.091)
C5: (106.806,-62.152,18.888)
C4: (106.425,-62.878,20.005)
P: (109.051,-69.321,22.501)
C4': (106.237,-67.400,20.809)
C2': (104.535,-66.116,19.735)
C2: (106.695,-61.153,21.335)
N1: (107.065,-60.325,20.350)
N3: (106.353,-62.434,21.271)
N6: (107.484,-59.977,18.112)
N7: (106.778,-62.945,17.753)
N9: (106.106,-64.134,19.549)
O5': (108.372,-68.083,21.742)
O3': (104.436,-68.538,19.666)
OP2: (109.186,-70.509,21.609)
C3': (105.305,-67.421,19.606)
C1': (105.558,-65.200,20.392)
C5': (107.468,-68.274,20.651)
O4': (106.591,-65.997,20.935)
C8: (106.365,-64.112,18.194)
O2': (103.490,-66.216,20.656)
C6: (107.128,-60.805,19.091)
C5: (106.806,-62.152,18.888)
C4: (106.425,-62.878,20.005)
P: (109.051,-69.321,22.501)
C4': (106.237,-67.400,20.809)
C2': (104.535,-66.116,19.735)
C2: (106.695,-61.153,21.335)
N1: (107.065,-60.325,20.350)
N3: (106.353,-62.434,21.271)
N6: (107.484,-59.977,18.112)
N7: (106.778,-62.945,17.753)
N9: (106.106,-64.134,19.549)
O5': (108.372,-68.083,21.742)
O3': (104.436,-68.538,19.666)
C2: (109.200,-56.649,17.344)
OP1: (105.039,-50.512,20.223)
OP2: (106.719,-50.486,18.295)
C4: (110.229,-54.937,16.170)
O5': (106.309,-52.564,19.670)
C3': (107.413,-55.239,20.809)
C1': (107.173,-56.248,18.680)
O4': (106.157,-55.270,18.844)
C5': (105.491,-53.504,20.375)
P: (105.686,-51.208,19.090)
O2: (109.148,-57.822,17.727)
C4': (106.033,-54.921,20.249)
C2': (107.808,-56.495,20.043)
O2': (107.310,-57.693,20.588)
N1: (108.197,-55.760,17.744)
N3: (110.200,-56.209,16.559)
N4: (111.259,-54.544,15.434)
C6: (108.207,-54.467,17.299)
C5: (109.202,-54.014,16.524)
O3': (107.418,-55.495,22.205)
OP1: (105.039,-50.512,20.223)
OP2: (106.719,-50.486,18.295)
C4: (110.229,-54.937,16.170)
O5': (106.309,-52.564,19.670)
C3': (107.413,-55.239,20.809)
C1': (107.173,-56.248,18.680)
O4': (106.157,-55.270,18.844)
C5': (105.491,-53.504,20.375)
P: (105.686,-51.208,19.090)
O2: (109.148,-57.822,17.727)
C4': (106.033,-54.921,20.249)
C2': (107.808,-56.495,20.043)
O2': (107.310,-57.693,20.588)
N1: (108.197,-55.760,17.744)
N3: (110.200,-56.209,16.559)
N4: (111.259,-54.544,15.434)
C6: (108.207,-54.467,17.299)
C5: (109.202,-54.014,16.524)
O3': (107.418,-55.495,22.205)
Image (generated by PyMOL):