Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1236:A1589
Extra
PDB:
ATOM 1 O3' A A1235 30.711 -82.846 2.477 1.00 57.00 O
ATOM 2 P A A1236 32.060 -83.070 3.308 1.00 47.90 P
ATOM 3 OP1 A A1236 33.193 -82.960 2.323 1.00 39.30 O
ATOM 4 OP2 A A1236 31.908 -84.330 4.100 1.00 40.68 O
ATOM 5 O5' A A1236 32.043 -81.818 4.279 1.00 32.66 O
ATOM 6 C5' A A1236 30.823 -81.200 4.610 1.00 33.00 C
ATOM 7 C4' A A1236 31.026 -79.764 4.985 1.00 37.14 C
ATOM 8 O4' A A1236 32.336 -79.593 5.558 1.00 36.74 O
ATOM 9 C3' A A1236 30.956 -78.774 3.837 1.00 40.46 C
ATOM 10 O3' A A1236 29.624 -78.346 3.593 1.00 41.42 O
ATOM 11 C2' A A1236 31.885 -77.642 4.266 1.00 32.97 C
ATOM 12 O2' A A1236 31.185 -76.691 5.050 1.00 33.37 O
ATOM 13 C1' A A1236 32.886 -78.361 5.163 1.00 34.87 C
ATOM 14 N9 A A1236 34.177 -78.609 4.491 1.00 38.48 N
ATOM 15 C8 A A1236 34.933 -79.764 4.489 1.00 36.22 C
ATOM 16 N7 A A1236 36.060 -79.675 3.829 1.00 28.30 N
ATOM 17 C5 A A1236 36.054 -78.364 3.381 1.00 30.83 C
ATOM 18 C6 A A1236 36.969 -77.621 2.611 1.00 33.96 C
ATOM 19 N6 A A1236 38.133 -78.077 2.135 1.00 31.52 N
ATOM 20 N1 A A1236 36.652 -76.345 2.328 1.00 38.82 N
ATOM 21 C2 A A1236 35.503 -75.855 2.810 1.00 40.52 C
ATOM 22 N3 A A1236 34.560 -76.441 3.541 1.00 38.19 N
ATOM 23 C4 A A1236 34.908 -77.702 3.790 1.00 34.11 C
ATOM 24 P U A1237 28.845 -78.823 2.277 1.00 32.66 P
ATOM 25 OP1 U A1237 27.402 -78.560 2.503 1.00 48.77 O
ATOM 26 OP2 U A1237 29.285 -80.208 1.976 1.00 43.40 O
ATOM 27 O5' U A1237 29.400 -77.823 1.194 1.00 36.97 O
TER
ATOM 1 O3' G B1588 39.430 -70.832 -3.152 1.00 30.22 O
ATOM 2 P C B1589 40.920 -70.409 -2.673 1.00 23.90 P
ATOM 3 OP1 C B1589 40.988 -68.931 -2.645 1.00 28.50 O
ATOM 4 OP2 C B1589 41.865 -71.126 -3.525 1.00 33.36 O
ATOM 5 O5' C B1589 40.979 -70.968 -1.192 1.00 23.33 O
ATOM 6 C5' C B1589 41.515 -72.229 -0.899 1.00 20.56 C
ATOM 7 C4' C B1589 40.488 -73.133 -0.279 1.00 23.45 C
ATOM 8 O4' C B1589 40.902 -74.499 -0.486 1.00 30.54 O
ATOM 9 C3' C B1589 40.282 -73.028 1.233 1.00 24.92 C
ATOM 10 O3' C B1589 39.353 -72.011 1.601 1.00 26.89 O
ATOM 11 C2' C B1589 39.808 -74.427 1.566 1.00 32.51 C
ATOM 12 O2' C B1589 38.473 -74.620 1.119 1.00 27.92 O
ATOM 13 C1' C B1589 40.710 -75.243 0.668 1.00 29.80 C
ATOM 14 N1 C B1589 42.026 -75.470 1.261 1.00 30.65 N
ATOM 15 C2 C B1589 42.287 -76.676 1.918 1.00 33.64 C
ATOM 16 O2 C B1589 41.397 -77.522 2.044 1.00 35.17 O
ATOM 17 N3 C B1589 43.498 -76.895 2.438 1.00 33.44 N
ATOM 18 C4 C B1589 44.418 -75.962 2.308 1.00 35.03 C
ATOM 19 N4 C B1589 45.598 -76.223 2.855 1.00 41.56 N
ATOM 20 C5 C B1589 44.191 -74.733 1.623 1.00 37.43 C
ATOM 21 C6 C B1589 42.981 -74.523 1.108 1.00 31.32 C
ATOM 22 P G B1590 38.859 -71.788 3.139 1.00 30.85 P
ATOM 23 OP1 G B1590 37.523 -71.127 3.059 1.00 34.87 O
ATOM 24 OP2 G B1590 39.959 -71.109 3.877 1.00 23.22 O
ATOM 25 O5' G B1590 38.679 -73.248 3.699 1.00 34.81 O
TER
ATOM 2 P A A1236 32.060 -83.070 3.308 1.00 47.90 P
ATOM 3 OP1 A A1236 33.193 -82.960 2.323 1.00 39.30 O
ATOM 4 OP2 A A1236 31.908 -84.330 4.100 1.00 40.68 O
ATOM 5 O5' A A1236 32.043 -81.818 4.279 1.00 32.66 O
ATOM 6 C5' A A1236 30.823 -81.200 4.610 1.00 33.00 C
ATOM 7 C4' A A1236 31.026 -79.764 4.985 1.00 37.14 C
ATOM 8 O4' A A1236 32.336 -79.593 5.558 1.00 36.74 O
ATOM 9 C3' A A1236 30.956 -78.774 3.837 1.00 40.46 C
ATOM 10 O3' A A1236 29.624 -78.346 3.593 1.00 41.42 O
ATOM 11 C2' A A1236 31.885 -77.642 4.266 1.00 32.97 C
ATOM 12 O2' A A1236 31.185 -76.691 5.050 1.00 33.37 O
ATOM 13 C1' A A1236 32.886 -78.361 5.163 1.00 34.87 C
ATOM 14 N9 A A1236 34.177 -78.609 4.491 1.00 38.48 N
ATOM 15 C8 A A1236 34.933 -79.764 4.489 1.00 36.22 C
ATOM 16 N7 A A1236 36.060 -79.675 3.829 1.00 28.30 N
ATOM 17 C5 A A1236 36.054 -78.364 3.381 1.00 30.83 C
ATOM 18 C6 A A1236 36.969 -77.621 2.611 1.00 33.96 C
ATOM 19 N6 A A1236 38.133 -78.077 2.135 1.00 31.52 N
ATOM 20 N1 A A1236 36.652 -76.345 2.328 1.00 38.82 N
ATOM 21 C2 A A1236 35.503 -75.855 2.810 1.00 40.52 C
ATOM 22 N3 A A1236 34.560 -76.441 3.541 1.00 38.19 N
ATOM 23 C4 A A1236 34.908 -77.702 3.790 1.00 34.11 C
ATOM 24 P U A1237 28.845 -78.823 2.277 1.00 32.66 P
ATOM 25 OP1 U A1237 27.402 -78.560 2.503 1.00 48.77 O
ATOM 26 OP2 U A1237 29.285 -80.208 1.976 1.00 43.40 O
ATOM 27 O5' U A1237 29.400 -77.823 1.194 1.00 36.97 O
TER
ATOM 1 O3' G B1588 39.430 -70.832 -3.152 1.00 30.22 O
ATOM 2 P C B1589 40.920 -70.409 -2.673 1.00 23.90 P
ATOM 3 OP1 C B1589 40.988 -68.931 -2.645 1.00 28.50 O
ATOM 4 OP2 C B1589 41.865 -71.126 -3.525 1.00 33.36 O
ATOM 5 O5' C B1589 40.979 -70.968 -1.192 1.00 23.33 O
ATOM 6 C5' C B1589 41.515 -72.229 -0.899 1.00 20.56 C
ATOM 7 C4' C B1589 40.488 -73.133 -0.279 1.00 23.45 C
ATOM 8 O4' C B1589 40.902 -74.499 -0.486 1.00 30.54 O
ATOM 9 C3' C B1589 40.282 -73.028 1.233 1.00 24.92 C
ATOM 10 O3' C B1589 39.353 -72.011 1.601 1.00 26.89 O
ATOM 11 C2' C B1589 39.808 -74.427 1.566 1.00 32.51 C
ATOM 12 O2' C B1589 38.473 -74.620 1.119 1.00 27.92 O
ATOM 13 C1' C B1589 40.710 -75.243 0.668 1.00 29.80 C
ATOM 14 N1 C B1589 42.026 -75.470 1.261 1.00 30.65 N
ATOM 15 C2 C B1589 42.287 -76.676 1.918 1.00 33.64 C
ATOM 16 O2 C B1589 41.397 -77.522 2.044 1.00 35.17 O
ATOM 17 N3 C B1589 43.498 -76.895 2.438 1.00 33.44 N
ATOM 18 C4 C B1589 44.418 -75.962 2.308 1.00 35.03 C
ATOM 19 N4 C B1589 45.598 -76.223 2.855 1.00 41.56 N
ATOM 20 C5 C B1589 44.191 -74.733 1.623 1.00 37.43 C
ATOM 21 C6 C B1589 42.981 -74.523 1.108 1.00 31.32 C
ATOM 22 P G B1590 38.859 -71.788 3.139 1.00 30.85 P
ATOM 23 OP1 G B1590 37.523 -71.127 3.059 1.00 34.87 O
ATOM 24 OP2 G B1590 39.959 -71.109 3.877 1.00 23.22 O
ATOM 25 O5' G B1590 38.679 -73.248 3.699 1.00 34.81 O
TER
Atoms:
OP1: (33.193,-82.960,2.323)
OP2: (31.908,-84.330,4.100)
C3': (30.956,-78.774,3.837)
C1': (32.886,-78.361,5.163)
C5': (30.823,-81.200,4.610)
O4': (32.336,-79.593,5.558)
C8: (34.933,-79.764,4.489)
O2': (31.185,-76.691,5.050)
C6: (36.969,-77.621,2.611)
C5: (36.054,-78.364,3.381)
C4: (34.908,-77.702,3.790)
P: (32.060,-83.070,3.308)
C4': (31.026,-79.764,4.985)
C2': (31.885,-77.642,4.266)
C2: (35.503,-75.855,2.810)
N1: (36.652,-76.345,2.328)
N3: (34.560,-76.441,3.541)
N6: (38.133,-78.077,2.135)
N7: (36.060,-79.675,3.829)
N9: (34.177,-78.609,4.491)
O5': (32.043,-81.818,4.279)
O3': (29.624,-78.346,3.593)
OP2: (31.908,-84.330,4.100)
C3': (30.956,-78.774,3.837)
C1': (32.886,-78.361,5.163)
C5': (30.823,-81.200,4.610)
O4': (32.336,-79.593,5.558)
C8: (34.933,-79.764,4.489)
O2': (31.185,-76.691,5.050)
C6: (36.969,-77.621,2.611)
C5: (36.054,-78.364,3.381)
C4: (34.908,-77.702,3.790)
P: (32.060,-83.070,3.308)
C4': (31.026,-79.764,4.985)
C2': (31.885,-77.642,4.266)
C2: (35.503,-75.855,2.810)
N1: (36.652,-76.345,2.328)
N3: (34.560,-76.441,3.541)
N6: (38.133,-78.077,2.135)
N7: (36.060,-79.675,3.829)
N9: (34.177,-78.609,4.491)
O5': (32.043,-81.818,4.279)
O3': (29.624,-78.346,3.593)
C2: (42.287,-76.676,1.918)
OP1: (40.988,-68.931,-2.645)
OP2: (41.865,-71.126,-3.525)
C4: (44.418,-75.962,2.308)
O5': (40.979,-70.968,-1.192)
C3': (40.282,-73.028,1.233)
C1': (40.710,-75.243,0.668)
O4': (40.902,-74.499,-0.486)
C5': (41.515,-72.229,-0.899)
P: (40.920,-70.409,-2.673)
O2: (41.397,-77.522,2.044)
C4': (40.488,-73.133,-0.279)
C2': (39.808,-74.427,1.566)
O2': (38.473,-74.620,1.119)
N1: (42.026,-75.470,1.261)
N3: (43.498,-76.895,2.438)
N4: (45.598,-76.223,2.855)
C6: (42.981,-74.523,1.108)
C5: (44.191,-74.733,1.623)
O3': (39.353,-72.011,1.601)
OP1: (40.988,-68.931,-2.645)
OP2: (41.865,-71.126,-3.525)
C4: (44.418,-75.962,2.308)
O5': (40.979,-70.968,-1.192)
C3': (40.282,-73.028,1.233)
C1': (40.710,-75.243,0.668)
O4': (40.902,-74.499,-0.486)
C5': (41.515,-72.229,-0.899)
P: (40.920,-70.409,-2.673)
O2: (41.397,-77.522,2.044)
C4': (40.488,-73.133,-0.279)
C2': (39.808,-74.427,1.566)
O2': (38.473,-74.620,1.119)
N1: (42.026,-75.470,1.261)
N3: (43.498,-76.895,2.438)
N4: (45.598,-76.223,2.855)
C6: (42.981,-74.523,1.108)
C5: (44.191,-74.733,1.623)
O3': (39.353,-72.011,1.601)
Image (generated by PyMOL):