ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0662:026

Extra

PDB:
ATOM 1 O3' U A 661 34.477 115.470 28.754 1.00 48.21 O
ATOM 2 P A A 662 34.657 115.843 30.307 1.00 47.75 P
ATOM 3 OP1 A A 662 33.375 116.337 30.886 1.00 44.89 O
ATOM 4 OP2 A A 662 35.888 116.679 30.415 1.00 48.39 O
ATOM 5 O5' A A 662 34.987 114.443 30.978 1.00 44.86 O
ATOM 6 C5' A A 662 35.973 113.576 30.404 1.00 43.23 C
ATOM 7 C4' A A 662 36.804 112.948 31.490 1.00 42.85 C
ATOM 8 O4' A A 662 37.655 113.966 32.081 1.00 44.75 O
ATOM 9 C3' A A 662 36.017 112.327 32.645 1.00 42.51 C
ATOM 10 O3' A A 662 36.728 111.206 33.147 1.00 41.33 O
ATOM 11 C2' A A 662 36.043 113.433 33.690 1.00 42.12 C
ATOM 12 O2' A A 662 35.923 112.941 35.003 1.00 42.60 O
ATOM 13 C1' A A 662 37.444 113.995 33.474 1.00 44.54 C
ATOM 14 N9 A A 662 37.622 115.360 33.957 1.00 44.91 N
ATOM 15 C8 A A 662 36.918 116.497 33.642 1.00 43.47 C
ATOM 16 N7 A A 662 37.318 117.561 34.292 1.00 42.94 N
ATOM 17 C5 A A 662 38.360 117.094 35.082 1.00 43.92 C
ATOM 18 C6 A A 662 39.200 117.730 36.010 1.00 43.20 C
ATOM 19 N6 A A 662 39.116 119.022 36.309 1.00 43.13 N
ATOM 20 N1 A A 662 40.140 116.980 36.625 1.00 43.54 N
ATOM 21 C2 A A 662 40.223 115.676 36.317 1.00 44.65 C
ATOM 22 N3 A A 662 39.489 114.964 35.462 1.00 43.36 N
ATOM 23 C4 A A 662 38.565 115.744 34.875 1.00 44.10 C
ATOM 24 P U A 663 36.226 109.727 32.788 1.00 42.06 P
ATOM 25 OP1 U A 663 37.128 108.769 33.488 1.00 41.86 O
ATOM 26 OP2 U A 663 36.067 109.645 31.311 1.00 42.89 O
ATOM 27 O5' U A 663 34.780 109.645 33.444 1.00 40.51 O
TER

ATOM 1 O3' U B 25 46.372 119.525 43.696 1.00 31.97 O
ATOM 2 P C B 26 47.134 119.403 42.294 1.00 33.62 P
ATOM 3 OP1 C B 26 48.066 118.259 42.421 1.00 34.17 O
ATOM 4 OP2 C B 26 47.657 120.729 41.893 1.00 36.47 O
ATOM 5 O5' C B 26 45.991 119.016 41.267 1.00 35.42 O
ATOM 6 C5' C B 26 45.233 117.820 41.445 1.00 36.53 C
ATOM 7 C4' C B 26 44.075 117.790 40.482 1.00 36.30 C
ATOM 8 O4' C B 26 43.198 118.914 40.751 1.00 35.94 O
ATOM 9 C3' C B 26 44.411 117.962 39.010 1.00 36.98 C
ATOM 10 O3' C B 26 44.897 116.786 38.398 1.00 39.26 O
ATOM 11 C2' C B 26 43.069 118.381 38.441 1.00 38.13 C
ATOM 12 O2' C B 26 42.164 117.299 38.347 1.00 38.99 O
ATOM 13 C1' C B 26 42.585 119.332 39.533 1.00 38.36 C
ATOM 14 N1 C B 26 42.971 120.732 39.254 1.00 37.99 N
ATOM 15 C2 C B 26 42.160 121.496 38.410 1.00 37.67 C
ATOM 16 O2 C B 26 41.181 120.962 37.868 1.00 37.10 O
ATOM 17 N3 C B 26 42.467 122.794 38.199 1.00 38.19 N
ATOM 18 C4 C B 26 43.543 123.329 38.779 1.00 38.92 C
ATOM 19 N4 C B 26 43.788 124.625 38.564 1.00 39.39 N
ATOM 20 C5 C B 26 44.409 122.564 39.611 1.00 37.75 C
ATOM 21 C6 C B 26 44.090 121.283 39.820 1.00 37.81 C
ATOM 22 P A B 27 45.852 116.910 37.105 1.00 43.80 P
ATOM 23 OP1 A B 27 46.299 115.538 36.761 1.00 43.68 O
ATOM 24 OP2 A B 27 46.869 117.973 37.323 1.00 43.63 O
ATOM 25 O5' A B 27 44.871 117.439 35.969 1.00 43.87 O
TER

Atoms:
OP1: (33.375,116.337,30.886)
OP2: (35.888,116.679,30.415)
C3': (36.017,112.327,32.645)
C1': (37.444,113.995,33.474)
C5': (35.973,113.576,30.404)
O4': (37.655,113.966,32.081)
C8: (36.918,116.497,33.642)
O2': (35.923,112.941,35.003)
C6: (39.200,117.730,36.010)
C5: (38.360,117.094,35.082)
C4: (38.565,115.744,34.875)
P: (34.657,115.843,30.307)
C4': (36.804,112.948,31.490)
C2': (36.043,113.433,33.690)
C2: (40.223,115.676,36.317)
N1: (40.140,116.980,36.625)
N3: (39.489,114.964,35.462)
N6: (39.116,119.022,36.309)
N7: (37.318,117.561,34.292)
N9: (37.622,115.360,33.957)
O5': (34.987,114.443,30.978)
O3': (36.728,111.206,33.147)
C2: (42.160,121.496,38.410)
OP1: (48.066,118.259,42.421)
OP2: (47.657,120.729,41.893)
C4: (43.543,123.329,38.779)
O5': (45.991,119.016,41.267)
C3': (44.411,117.962,39.010)
C1': (42.585,119.332,39.533)
O4': (43.198,118.914,40.751)
C5': (45.233,117.820,41.445)
P: (47.134,119.403,42.294)
O2: (41.181,120.962,37.868)
C4': (44.075,117.790,40.482)
C2': (43.069,118.381,38.441)
O2': (42.164,117.299,38.347)
N1: (42.971,120.732,39.254)
N3: (42.467,122.794,38.199)
N4: (43.788,124.625,38.564)
C6: (44.090,121.283,39.820)
C5: (44.409,122.564,39.611)
O3': (44.897,116.786,38.398)
Image (generated by PyMOL):
PyMOL image
show in jmol