ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A1083:A1042

Extra

PDB:
ATOM 1 O3' A A1082 36.276 100.156 121.117 1.00 40.27 O
ATOM 2 P A A1083 35.166 99.522 120.147 1.00 42.32 P
ATOM 3 OP1 A A1083 35.567 99.883 118.765 1.00 43.98 O
ATOM 4 OP2 A A1083 33.814 99.909 120.635 1.00 42.67 O
ATOM 5 O5' A A1083 35.319 97.957 120.380 1.00 39.84 O
ATOM 6 C5' A A1083 36.541 97.283 120.088 1.00 37.23 C
ATOM 7 C4' A A1083 36.277 95.830 119.831 1.00 37.02 C
ATOM 8 O4' A A1083 34.980 95.652 119.218 1.00 37.74 O
ATOM 9 C3' A A1083 37.272 95.186 118.894 1.00 37.75 C
ATOM 10 O3' A A1083 38.391 94.694 119.604 1.00 37.74 O
ATOM 11 C2' A A1083 36.447 94.120 118.182 1.00 38.38 C
ATOM 12 O2' A A1083 36.302 92.926 118.915 1.00 38.67 O
ATOM 13 C1' A A1083 35.094 94.819 118.075 1.00 37.99 C
ATOM 14 N9 A A1083 34.937 95.667 116.888 1.00 38.14 N
ATOM 15 C8 A A1083 34.596 97.000 116.890 1.00 37.34 C
ATOM 16 N7 A A1083 34.508 97.529 115.699 1.00 36.47 N
ATOM 17 C5 A A1083 34.813 96.480 114.847 1.00 36.00 C
ATOM 18 C6 A A1083 34.892 96.406 113.456 1.00 34.88 C
ATOM 19 N6 A A1083 34.650 97.439 112.657 1.00 32.95 N
ATOM 20 N1 A A1083 35.229 95.224 112.908 1.00 36.57 N
ATOM 21 C2 A A1083 35.464 94.189 113.722 1.00 38.42 C
ATOM 22 N3 A A1083 35.418 94.133 115.054 1.00 39.04 N
ATOM 23 C4 A A1083 35.082 95.326 115.562 1.00 36.94 C
ATOM 24 P U A1084 39.782 95.452 119.485 1.00 36.53 P
ATOM 25 OP1 U A1084 40.756 94.771 120.386 1.00 35.89 O
ATOM 26 OP2 U A1084 39.495 96.878 119.662 1.00 34.71 O
ATOM 27 O5' U A1084 40.205 95.198 117.972 1.00 36.57 O
TER

ATOM 1 O3' A B1041 38.046 95.675 103.556 1.00 32.63 O
ATOM 2 P C B1042 38.717 94.648 104.601 1.00 35.75 P
ATOM 3 OP1 C B1042 40.187 94.692 104.462 1.00 37.19 O
ATOM 4 OP2 C B1042 38.024 93.340 104.539 1.00 34.92 O
ATOM 5 O5' C B1042 38.375 95.240 106.035 1.00 35.12 O
ATOM 6 C5' C B1042 38.846 94.553 107.210 1.00 34.44 C
ATOM 7 C4' C B1042 37.863 94.686 108.354 1.00 34.59 C
ATOM 8 O4' C B1042 37.896 96.023 108.890 1.00 33.30 O
ATOM 9 C3' C B1042 36.396 94.397 108.078 1.00 34.34 C
ATOM 10 O3' C B1042 36.146 92.986 108.153 1.00 36.78 O
ATOM 11 C2' C B1042 35.713 95.158 109.209 1.00 33.98 C
ATOM 12 O2' C B1042 35.782 94.517 110.458 1.00 34.21 O
ATOM 13 C1' C B1042 36.603 96.389 109.323 1.00 33.30 C
ATOM 14 N1 C B1042 36.116 97.482 108.470 1.00 34.68 N
ATOM 15 C2 C B1042 35.029 98.212 108.899 1.00 33.76 C
ATOM 16 O2 C B1042 34.486 97.904 109.974 1.00 34.00 O
ATOM 17 N3 C B1042 34.583 99.229 108.136 1.00 34.92 N
ATOM 18 C4 C B1042 35.188 99.520 106.983 1.00 35.85 C
ATOM 19 N4 C B1042 34.729 100.558 106.271 1.00 36.98 N
ATOM 20 C5 C B1042 36.289 98.775 106.513 1.00 35.52 C
ATOM 21 C6 C B1042 36.719 97.776 107.277 1.00 35.25 C
ATOM 22 P C B1043 34.897 92.347 107.381 1.00 37.95 P
ATOM 23 OP1 C B1043 35.009 90.883 107.583 1.00 39.30 O
ATOM 24 OP2 C B1043 34.853 92.903 106.009 1.00 37.11 O
ATOM 25 O5' C B1043 33.632 92.863 108.189 1.00 35.13 O
TER

Atoms:
OP1: (35.567,99.883,118.765)
OP2: (33.814,99.909,120.635)
C3': (37.272,95.186,118.894)
C1': (35.094,94.819,118.075)
C5': (36.541,97.283,120.088)
O4': (34.980,95.652,119.218)
C8: (34.596,97.000,116.890)
O2': (36.302,92.926,118.915)
C6: (34.892,96.406,113.456)
C5: (34.813,96.480,114.847)
C4: (35.082,95.326,115.562)
P: (35.166,99.522,120.147)
C4': (36.277,95.830,119.831)
C2': (36.447,94.120,118.182)
C2: (35.464,94.189,113.722)
N1: (35.229,95.224,112.908)
N3: (35.418,94.133,115.054)
N6: (34.650,97.439,112.657)
N7: (34.508,97.529,115.699)
N9: (34.937,95.667,116.888)
O5': (35.319,97.957,120.380)
O3': (38.391,94.694,119.604)
C2: (35.029,98.212,108.899)
OP1: (40.187,94.692,104.462)
OP2: (38.024,93.340,104.539)
C4: (35.188,99.520,106.983)
O5': (38.375,95.240,106.035)
C3': (36.396,94.397,108.078)
C1': (36.603,96.389,109.323)
O4': (37.896,96.023,108.890)
C5': (38.846,94.553,107.210)
P: (38.717,94.648,104.601)
O2: (34.486,97.904,109.974)
C4': (37.863,94.686,108.354)
C2': (35.713,95.158,109.209)
O2': (35.782,94.517,110.458)
N1: (36.116,97.482,108.470)
N3: (34.583,99.229,108.136)
N4: (34.729,100.558,106.271)
C6: (36.719,97.776,107.277)
C5: (36.289,98.775,106.513)
O3': (36.146,92.986,108.153)
Image (generated by PyMOL):
PyMOL image
show in jmol