Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01083:01042
Extra
PDB:
ATOM 1 O3' A A1082 36.349 100.291 120.658 1.00 48.38 O
ATOM 2 P A A1083 35.254 99.543 119.750 1.00 50.12 P
ATOM 3 OP1 A A1083 35.702 99.699 118.342 1.00 49.49 O
ATOM 4 OP2 A A1083 33.892 99.998 120.145 1.00 52.94 O
ATOM 5 O5' A A1083 35.379 98.018 120.172 1.00 46.40 O
ATOM 6 C5' A A1083 36.561 97.286 119.868 1.00 40.68 C
ATOM 7 C4' A A1083 36.215 95.893 119.428 1.00 36.84 C
ATOM 8 O4' A A1083 34.952 95.878 118.719 1.00 37.18 O
ATOM 9 C3' A A1083 37.217 95.371 118.430 1.00 36.31 C
ATOM 10 O3' A A1083 38.356 94.879 119.092 1.00 34.43 O
ATOM 11 C2' A A1083 36.412 94.353 117.647 1.00 36.16 C
ATOM 12 O2' A A1083 36.268 93.146 118.352 1.00 37.36 O
ATOM 13 C1' A A1083 35.061 95.064 117.562 1.00 36.04 C
ATOM 14 N9 A A1083 34.913 95.944 116.400 1.00 34.98 N
ATOM 15 C8 A A1083 34.575 97.275 116.426 1.00 33.54 C
ATOM 16 N7 A A1083 34.461 97.816 115.240 1.00 33.67 N
ATOM 17 C5 A A1083 34.754 96.779 114.372 1.00 31.55 C
ATOM 18 C6 A A1083 34.790 96.713 112.979 1.00 31.34 C
ATOM 19 N6 A A1083 34.511 97.747 112.186 1.00 30.51 N
ATOM 20 N1 A A1083 35.123 95.534 112.417 1.00 31.28 N
ATOM 21 C2 A A1083 35.397 94.499 113.217 1.00 31.72 C
ATOM 22 N3 A A1083 35.388 94.435 114.545 1.00 32.67 N
ATOM 23 C4 A A1083 35.051 95.623 115.069 1.00 33.14 C
ATOM 24 P U A1084 39.742 95.654 118.924 1.00 32.22 P
ATOM 25 OP1 U A1084 40.743 95.044 119.829 1.00 32.99 O
ATOM 26 OP2 U A1084 39.445 97.092 119.033 1.00 32.22 O
ATOM 27 O5' U A1084 40.134 95.357 117.412 1.00 34.70 O
TER
ATOM 1 O3' A B1041 38.054 95.748 103.145 1.00 36.40 O
ATOM 2 P C B1042 38.760 94.703 104.146 1.00 36.74 P
ATOM 3 OP1 C B1042 40.231 94.692 103.942 1.00 35.35 O
ATOM 4 OP2 C B1042 37.989 93.439 103.974 1.00 35.81 O
ATOM 5 O5' C B1042 38.456 95.276 105.602 1.00 36.18 O
ATOM 6 C5' C B1042 38.877 94.545 106.778 1.00 36.04 C
ATOM 7 C4' C B1042 37.904 94.750 107.919 1.00 35.14 C
ATOM 8 O4' C B1042 37.923 96.134 108.357 1.00 36.67 O
ATOM 9 C3' C B1042 36.440 94.503 107.618 1.00 34.48 C
ATOM 10 O3' C B1042 36.120 93.129 107.638 1.00 35.72 O
ATOM 11 C2' C B1042 35.764 95.259 108.746 1.00 34.23 C
ATOM 12 O2' C B1042 35.895 94.595 109.982 1.00 34.49 O
ATOM 13 C1' C B1042 36.629 96.512 108.804 1.00 35.05 C
ATOM 14 N1 C B1042 36.114 97.580 107.924 1.00 35.74 N
ATOM 15 C2 C B1042 34.958 98.275 108.309 1.00 35.18 C
ATOM 16 O2 C B1042 34.390 97.967 109.366 1.00 34.97 O
ATOM 17 N3 C B1042 34.489 99.260 107.518 1.00 34.93 N
ATOM 18 C4 C B1042 35.116 99.561 106.383 1.00 33.94 C
ATOM 19 N4 C B1042 34.617 100.545 105.642 1.00 35.30 N
ATOM 20 C5 C B1042 36.283 98.867 105.960 1.00 34.14 C
ATOM 21 C6 C B1042 36.745 97.895 106.752 1.00 34.60 C
ATOM 22 P C B1043 34.847 92.611 106.821 1.00 36.44 P
ATOM 23 OP1 C B1043 34.869 91.126 106.839 1.00 36.78 O
ATOM 24 OP2 C B1043 34.822 93.332 105.524 1.00 37.59 O
ATOM 25 O5' C B1043 33.623 93.115 107.696 1.00 33.93 O
TER
ATOM 2 P A A1083 35.254 99.543 119.750 1.00 50.12 P
ATOM 3 OP1 A A1083 35.702 99.699 118.342 1.00 49.49 O
ATOM 4 OP2 A A1083 33.892 99.998 120.145 1.00 52.94 O
ATOM 5 O5' A A1083 35.379 98.018 120.172 1.00 46.40 O
ATOM 6 C5' A A1083 36.561 97.286 119.868 1.00 40.68 C
ATOM 7 C4' A A1083 36.215 95.893 119.428 1.00 36.84 C
ATOM 8 O4' A A1083 34.952 95.878 118.719 1.00 37.18 O
ATOM 9 C3' A A1083 37.217 95.371 118.430 1.00 36.31 C
ATOM 10 O3' A A1083 38.356 94.879 119.092 1.00 34.43 O
ATOM 11 C2' A A1083 36.412 94.353 117.647 1.00 36.16 C
ATOM 12 O2' A A1083 36.268 93.146 118.352 1.00 37.36 O
ATOM 13 C1' A A1083 35.061 95.064 117.562 1.00 36.04 C
ATOM 14 N9 A A1083 34.913 95.944 116.400 1.00 34.98 N
ATOM 15 C8 A A1083 34.575 97.275 116.426 1.00 33.54 C
ATOM 16 N7 A A1083 34.461 97.816 115.240 1.00 33.67 N
ATOM 17 C5 A A1083 34.754 96.779 114.372 1.00 31.55 C
ATOM 18 C6 A A1083 34.790 96.713 112.979 1.00 31.34 C
ATOM 19 N6 A A1083 34.511 97.747 112.186 1.00 30.51 N
ATOM 20 N1 A A1083 35.123 95.534 112.417 1.00 31.28 N
ATOM 21 C2 A A1083 35.397 94.499 113.217 1.00 31.72 C
ATOM 22 N3 A A1083 35.388 94.435 114.545 1.00 32.67 N
ATOM 23 C4 A A1083 35.051 95.623 115.069 1.00 33.14 C
ATOM 24 P U A1084 39.742 95.654 118.924 1.00 32.22 P
ATOM 25 OP1 U A1084 40.743 95.044 119.829 1.00 32.99 O
ATOM 26 OP2 U A1084 39.445 97.092 119.033 1.00 32.22 O
ATOM 27 O5' U A1084 40.134 95.357 117.412 1.00 34.70 O
TER
ATOM 1 O3' A B1041 38.054 95.748 103.145 1.00 36.40 O
ATOM 2 P C B1042 38.760 94.703 104.146 1.00 36.74 P
ATOM 3 OP1 C B1042 40.231 94.692 103.942 1.00 35.35 O
ATOM 4 OP2 C B1042 37.989 93.439 103.974 1.00 35.81 O
ATOM 5 O5' C B1042 38.456 95.276 105.602 1.00 36.18 O
ATOM 6 C5' C B1042 38.877 94.545 106.778 1.00 36.04 C
ATOM 7 C4' C B1042 37.904 94.750 107.919 1.00 35.14 C
ATOM 8 O4' C B1042 37.923 96.134 108.357 1.00 36.67 O
ATOM 9 C3' C B1042 36.440 94.503 107.618 1.00 34.48 C
ATOM 10 O3' C B1042 36.120 93.129 107.638 1.00 35.72 O
ATOM 11 C2' C B1042 35.764 95.259 108.746 1.00 34.23 C
ATOM 12 O2' C B1042 35.895 94.595 109.982 1.00 34.49 O
ATOM 13 C1' C B1042 36.629 96.512 108.804 1.00 35.05 C
ATOM 14 N1 C B1042 36.114 97.580 107.924 1.00 35.74 N
ATOM 15 C2 C B1042 34.958 98.275 108.309 1.00 35.18 C
ATOM 16 O2 C B1042 34.390 97.967 109.366 1.00 34.97 O
ATOM 17 N3 C B1042 34.489 99.260 107.518 1.00 34.93 N
ATOM 18 C4 C B1042 35.116 99.561 106.383 1.00 33.94 C
ATOM 19 N4 C B1042 34.617 100.545 105.642 1.00 35.30 N
ATOM 20 C5 C B1042 36.283 98.867 105.960 1.00 34.14 C
ATOM 21 C6 C B1042 36.745 97.895 106.752 1.00 34.60 C
ATOM 22 P C B1043 34.847 92.611 106.821 1.00 36.44 P
ATOM 23 OP1 C B1043 34.869 91.126 106.839 1.00 36.78 O
ATOM 24 OP2 C B1043 34.822 93.332 105.524 1.00 37.59 O
ATOM 25 O5' C B1043 33.623 93.115 107.696 1.00 33.93 O
TER
Atoms:
OP1: (35.702,99.699,118.342)
OP2: (33.892,99.998,120.145)
C3': (37.217,95.371,118.430)
C1': (35.061,95.064,117.562)
C5': (36.561,97.286,119.868)
O4': (34.952,95.878,118.719)
C8: (34.575,97.275,116.426)
O2': (36.268,93.146,118.352)
C6: (34.790,96.713,112.979)
C5: (34.754,96.779,114.372)
C4: (35.051,95.623,115.069)
P: (35.254,99.543,119.750)
C4': (36.215,95.893,119.428)
C2': (36.412,94.353,117.647)
C2: (35.397,94.499,113.217)
N1: (35.123,95.534,112.417)
N3: (35.388,94.435,114.545)
N6: (34.511,97.747,112.186)
N7: (34.461,97.816,115.240)
N9: (34.913,95.944,116.400)
O5': (35.379,98.018,120.172)
O3': (38.356,94.879,119.092)
OP2: (33.892,99.998,120.145)
C3': (37.217,95.371,118.430)
C1': (35.061,95.064,117.562)
C5': (36.561,97.286,119.868)
O4': (34.952,95.878,118.719)
C8: (34.575,97.275,116.426)
O2': (36.268,93.146,118.352)
C6: (34.790,96.713,112.979)
C5: (34.754,96.779,114.372)
C4: (35.051,95.623,115.069)
P: (35.254,99.543,119.750)
C4': (36.215,95.893,119.428)
C2': (36.412,94.353,117.647)
C2: (35.397,94.499,113.217)
N1: (35.123,95.534,112.417)
N3: (35.388,94.435,114.545)
N6: (34.511,97.747,112.186)
N7: (34.461,97.816,115.240)
N9: (34.913,95.944,116.400)
O5': (35.379,98.018,120.172)
O3': (38.356,94.879,119.092)
C2: (34.958,98.275,108.309)
OP1: (40.231,94.692,103.942)
OP2: (37.989,93.439,103.974)
C4: (35.116,99.561,106.383)
O5': (38.456,95.276,105.602)
C3': (36.440,94.503,107.618)
C1': (36.629,96.512,108.804)
O4': (37.923,96.134,108.357)
C5': (38.877,94.545,106.778)
P: (38.760,94.703,104.146)
O2: (34.390,97.967,109.366)
C4': (37.904,94.750,107.919)
C2': (35.764,95.259,108.746)
O2': (35.895,94.595,109.982)
N1: (36.114,97.580,107.924)
N3: (34.489,99.260,107.518)
N4: (34.617,100.545,105.642)
C6: (36.745,97.895,106.752)
C5: (36.283,98.867,105.960)
O3': (36.120,93.129,107.638)
OP1: (40.231,94.692,103.942)
OP2: (37.989,93.439,103.974)
C4: (35.116,99.561,106.383)
O5': (38.456,95.276,105.602)
C3': (36.440,94.503,107.618)
C1': (36.629,96.512,108.804)
O4': (37.923,96.134,108.357)
C5': (38.877,94.545,106.778)
P: (38.760,94.703,104.146)
O2: (34.390,97.967,109.366)
C4': (37.904,94.750,107.919)
C2': (35.764,95.259,108.746)
O2': (35.895,94.595,109.982)
N1: (36.114,97.580,107.924)
N3: (34.489,99.260,107.518)
N4: (34.617,100.545,105.642)
C6: (36.745,97.895,106.752)
C5: (36.283,98.867,105.960)
O3': (36.120,93.129,107.638)
Image (generated by PyMOL):