ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2A43:A20:A11

Extra

PDB:
ATOM 1 O3' C A 19 -3.533 42.213 8.595 1.00 20.41 O
ATOM 2 P A A 20 -3.330 43.677 9.252 1.00 19.86 P
ATOM 3 OP1 A A 20 -2.733 44.478 8.158 1.00 23.60 O
ATOM 4 OP2 A A 20 -2.583 43.544 10.518 1.00 20.56 O
ATOM 5 O5' A A 20 -4.805 44.134 9.519 1.00 19.03 O
ATOM 6 C5' A A 20 -5.162 44.889 10.681 1.00 17.40 C
ATOM 7 C4' A A 20 -6.647 44.660 10.902 1.00 19.13 C
ATOM 8 O4' A A 20 -6.856 43.352 11.569 1.00 17.06 O
ATOM 9 C3' A A 20 -7.230 45.629 11.929 1.00 18.58 C
ATOM 10 O3' A A 20 -7.510 46.862 11.272 1.00 18.93 O
ATOM 11 C2' A A 20 -8.469 44.871 12.340 1.00 18.25 C
ATOM 12 O2' A A 20 -9.501 44.858 11.369 1.00 19.61 O
ATOM 13 C1' A A 20 -7.892 43.471 12.477 1.00 16.74 C
ATOM 14 N9 A A 20 -7.393 43.154 13.812 1.00 15.75 N
ATOM 15 C8 A A 20 -6.103 42.962 14.200 1.00 15.80 C
ATOM 16 N7 A A 20 -5.965 42.665 15.481 1.00 15.64 N
ATOM 17 C5 A A 20 -7.265 42.644 15.935 1.00 15.90 C
ATOM 18 C6 A A 20 -7.847 42.358 17.166 1.00 14.54 C
ATOM 19 N6 A A 20 -7.136 42.053 18.245 1.00 17.26 N
ATOM 20 N1 A A 20 -9.185 42.430 17.286 1.00 16.46 N
ATOM 21 C2 A A 20 -9.922 42.726 16.212 1.00 17.22 C
ATOM 22 N3 A A 20 -9.490 43.007 14.995 1.00 16.80 N
ATOM 23 C4 A A 20 -8.158 42.943 14.919 1.00 15.96 C
ATOM 24 P A A 21 -7.397 48.215 12.123 1.00 19.64 P
ATOM 25 OP1 A A 21 -7.625 49.280 11.140 1.00 23.77 O
ATOM 26 OP2 A A 21 -6.174 48.205 12.960 1.00 20.07 O
ATOM 27 O5' A A 21 -8.562 48.105 13.199 1.00 20.28 O
TER

ATOM 1 O3' C B 10 -13.916 42.077 25.944 1.00 17.69 O
ATOM 2 P C B 11 -13.993 40.768 25.014 1.00 18.28 P
ATOM 3 OP1 C B 11 -15.436 40.747 24.630 1.00 19.97 O
ATOM 4 OP2 C B 11 -13.378 39.620 25.693 1.00 18.13 O
ATOM 5 O5' C B 11 -13.054 41.061 23.801 1.00 17.08 O
ATOM 6 C5' C B 11 -13.436 41.948 22.761 1.00 18.39 C
ATOM 7 C4' C B 11 -12.378 41.965 21.670 1.00 16.60 C
ATOM 8 O4' C B 11 -11.140 42.559 22.111 1.00 15.61 O
ATOM 9 C3' C B 11 -11.943 40.614 21.171 1.00 14.91 C
ATOM 10 O3' C B 11 -12.909 40.090 20.270 1.00 17.57 O
ATOM 11 C2' C B 11 -10.677 40.980 20.394 1.00 15.14 C
ATOM 12 O2' C B 11 -11.004 41.769 19.243 1.00 17.41 O
ATOM 13 C1' C B 11 -10.072 41.896 21.448 1.00 13.58 C
ATOM 14 N1 C B 11 -9.257 41.243 22.470 1.00 13.20 N
ATOM 15 C2 C B 11 -7.935 40.926 22.124 1.00 13.01 C
ATOM 16 O2 C B 11 -7.572 41.139 20.963 1.00 13.73 O
ATOM 17 N3 C B 11 -7.161 40.384 23.054 1.00 12.74 N
ATOM 18 C4 C B 11 -7.591 40.049 24.271 1.00 12.89 C
ATOM 19 N4 C B 11 -6.768 39.587 25.210 1.00 14.80 N
ATOM 20 C5 C B 11 -8.978 40.295 24.580 1.00 12.67 C
ATOM 21 C6 C B 11 -9.764 40.843 23.686 1.00 14.76 C
ATOM 22 P G B 12 -13.092 38.518 20.142 1.00 18.53 P
ATOM 23 OP1 G B 12 -14.239 38.391 19.209 1.00 22.15 O
ATOM 24 OP2 G B 12 -13.113 37.850 21.484 1.00 19.74 O
ATOM 25 O5' G B 12 -11.739 38.062 19.431 1.00 17.01 O
TER

Atoms:
OP1: (-2.733,44.478,8.158)
OP2: (-2.583,43.544,10.518)
C3': (-7.230,45.629,11.929)
C1': (-7.892,43.471,12.477)
C5': (-5.162,44.889,10.681)
O4': (-6.856,43.352,11.569)
C8: (-6.103,42.962,14.200)
O2': (-9.501,44.858,11.369)
C6: (-7.847,42.358,17.166)
C5: (-7.265,42.644,15.935)
C4: (-8.158,42.943,14.919)
P: (-3.330,43.677,9.252)
C4': (-6.647,44.660,10.902)
C2': (-8.469,44.871,12.340)
C2: (-9.922,42.726,16.212)
N1: (-9.185,42.430,17.286)
N3: (-9.490,43.007,14.995)
N6: (-7.136,42.053,18.245)
N7: (-5.965,42.665,15.481)
N9: (-7.393,43.154,13.812)
O5': (-4.805,44.134,9.519)
O3': (-7.510,46.862,11.272)
C2: (-7.935,40.926,22.124)
OP1: (-15.436,40.747,24.630)
OP2: (-13.378,39.620,25.693)
C4: (-7.591,40.049,24.271)
O5': (-13.054,41.061,23.801)
C3': (-11.943,40.614,21.171)
C1': (-10.072,41.896,21.448)
O4': (-11.140,42.559,22.111)
C5': (-13.436,41.948,22.761)
P: (-13.993,40.768,25.014)
O2: (-7.572,41.139,20.963)
C4': (-12.378,41.965,21.670)
C2': (-10.677,40.980,20.394)
O2': (-11.004,41.769,19.243)
N1: (-9.257,41.243,22.470)
N3: (-7.161,40.384,23.054)
N4: (-6.768,39.587,25.210)
C6: (-9.764,40.843,23.686)
C5: (-8.978,40.295,24.580)
O3': (-12.909,40.090,20.270)
Image (generated by PyMOL):
PyMOL image
show in jmol