Doublet info:
Details
Nucleotide types:
UA
Description:
HS_cis: HS_cis
Program used:
JS
Has errors:
False
Source
PDB id:
SPEC:A3:B3
Extra
PDB:
ATOM 1 OP3 A A 32 -31.943 42.928 -56.701 1.00 45.08 O
ATOM 2 P A A 32 -31.564 42.980 -58.131 1.00 45.23 P
ATOM 3 OP1 A A 32 -31.043 41.661 -58.552 1.00 44.59 O
ATOM 4 OP2 A A 32 -30.480 43.976 -58.280 1.00 45.08 O
ATOM 5 O5' A A 32 -32.804 43.403 -59.050 1.00 44.77 O
ATOM 6 C5' A A 32 -33.742 44.430 -58.660 1.00 45.79 C
ATOM 7 C4' A A 32 -34.706 44.744 -59.811 1.00 46.59 C
ATOM 8 O4' A A 32 -34.007 45.320 -60.938 1.00 47.02 O
ATOM 9 C3' A A 32 -35.427 43.483 -60.301 1.00 47.10 C
ATOM 10 O3' A A 32 -36.692 43.344 -59.609 1.00 48.71 O
ATOM 11 C2' A A 32 -35.603 43.792 -61.784 1.00 47.22 C
ATOM 12 O2' A A 32 -36.718 44.650 -62.016 1.00 47.80 O
ATOM 13 C1' A A 32 -34.304 44.534 -62.117 1.00 46.91 C
ATOM 14 N9 A A 32 -33.126 43.701 -62.476 1.00 46.69 N
ATOM 15 C8 A A 32 -31.842 43.786 -61.979 1.00 46.80 C
ATOM 16 N7 A A 32 -30.994 43.023 -62.556 1.00 46.88 N
ATOM 17 C5 A A 32 -31.720 42.348 -63.495 1.00 46.69 C
ATOM 18 C6 A A 32 -31.405 41.378 -64.481 1.00 46.98 C
ATOM 19 N6 A A 32 -30.143 40.912 -64.696 1.00 45.85 N
ATOM 20 N1 A A 32 -32.354 40.892 -65.238 1.00 47.19 N
ATOM 21 C2 A A 32 -33.601 41.328 -65.077 1.00 47.11 C
ATOM 22 N3 A A 32 -34.038 42.243 -64.216 1.00 46.69 N
ATOM 23 C4 A A 32 -33.046 42.734 -63.438 1.00 46.65 C
ATOM 24 H5'1 A A 32 -33.180 45.316 -58.418 1.00 0.00 H
ATOM 25 H5'2 A A 32 -34.296 44.061 -57.815 1.00 0.00 H
ATOM 26 H4' A A 32 -35.424 45.480 -59.491 1.00 0.00 H
ATOM 27 H3' A A 32 -34.841 42.590 -60.171 1.00 0.00 H
ATOM 28 H1' A A 32 -34.459 45.155 -62.976 1.00 0.00 H
ATOM 29 H2' A A 32 -35.772 42.908 -62.369 1.00 0.00 H
ATOM 30 HO'2 A A 32 -37.517 44.219 -61.702 1.00 0.00 H
ATOM 31 H8 A A 32 -31.600 44.454 -61.178 1.00 0.00 H
ATOM 32 H61 A A 32 -29.388 41.254 -64.145 1.00 0.00 H
ATOM 33 H62 A A 32 -29.980 40.231 -65.404 1.00 0.00 H
ATOM 34 H2 A A 32 -34.342 40.891 -65.721 1.00 0.00 H
TER
ATOM 35 P U B 33 -37.656 42.073 -59.770 1.00 51.42 P
ATOM 36 OP1 U B 33 -38.299 41.810 -58.463 1.00 50.67 O
ATOM 37 OP2 U B 33 -36.931 40.871 -60.242 1.00 52.23 O
ATOM 38 O5' U B 33 -38.728 42.532 -60.874 1.00 49.90 O
ATOM 39 C5' U B 33 -39.867 43.359 -60.538 1.00 48.30 C
ATOM 40 C4' U B 33 -40.935 43.329 -61.640 1.00 48.60 C
ATOM 41 O4' U B 33 -40.501 43.966 -62.863 1.00 48.96 O
ATOM 42 C3' U B 33 -41.306 41.899 -62.026 1.00 48.83 C
ATOM 43 O3' U B 33 -42.199 41.302 -61.056 1.00 51.07 O
ATOM 44 C2' U B 33 -41.980 42.162 -63.368 1.00 47.79 C
ATOM 45 O2' U B 33 -43.301 42.677 -63.220 1.00 47.62 O
ATOM 46 C1' U B 33 -41.042 43.212 -63.987 1.00 47.39 C
ATOM 47 N1 U B 33 -39.958 42.598 -64.815 1.00 46.48 N
ATOM 48 C2 U B 33 -40.337 41.858 -65.954 1.00 46.51 C
ATOM 49 O2 U B 33 -41.484 41.809 -66.398 1.00 46.48 O
ATOM 50 N3 U B 33 -39.319 41.142 -66.584 1.00 45.70 N
ATOM 51 C4 U B 33 -37.966 41.141 -66.264 1.00 45.26 C
ATOM 52 O4 U B 33 -37.169 40.451 -66.894 1.00 45.82 O
ATOM 53 C5 U B 33 -37.639 42.033 -65.141 1.00 45.18 C
ATOM 54 C6 U B 33 -38.609 42.711 -64.493 1.00 46.28 C
ATOM 55 H5'1 U B 33 -39.513 44.365 -60.395 1.00 0.00 H
ATOM 56 H5'2 U B 33 -40.309 42.962 -59.641 1.00 0.00 H
ATOM 57 H4' U B 33 -41.808 43.862 -61.302 1.00 0.00 H
ATOM 58 H3' U B 33 -40.440 41.279 -62.164 1.00 0.00 H
ATOM 59 H1' U B 33 -41.591 43.843 -64.656 1.00 0.00 H
ATOM 60 H2' U B 33 -42.073 41.267 -63.954 1.00 0.00 H
ATOM 61 HO'2 U B 33 -43.837 42.034 -62.749 1.00 0.00 H
ATOM 62 H6 U B 33 -38.345 43.370 -63.691 1.00 0.00 H
ATOM 63 H3 U B 33 -39.593 40.563 -67.348 1.00 0.00 H
ATOM 64 H5 U B 33 -36.623 42.151 -64.830 1.00 0.00 H
ATOM 65 P C B 34 -42.626 39.754 -61.096 1.00 53.90 P
ATOM 66 OP1 C B 34 -42.676 39.203 -62.469 1.00 52.58 O
ATOM 67 OP2 C B 34 -43.938 39.584 -60.433 1.00 53.51 O
ATOM 68 O5' C B 34 -41.481 39.048 -60.224 1.00 52.09 O
TER
ATOM 2 P A A 32 -31.564 42.980 -58.131 1.00 45.23 P
ATOM 3 OP1 A A 32 -31.043 41.661 -58.552 1.00 44.59 O
ATOM 4 OP2 A A 32 -30.480 43.976 -58.280 1.00 45.08 O
ATOM 5 O5' A A 32 -32.804 43.403 -59.050 1.00 44.77 O
ATOM 6 C5' A A 32 -33.742 44.430 -58.660 1.00 45.79 C
ATOM 7 C4' A A 32 -34.706 44.744 -59.811 1.00 46.59 C
ATOM 8 O4' A A 32 -34.007 45.320 -60.938 1.00 47.02 O
ATOM 9 C3' A A 32 -35.427 43.483 -60.301 1.00 47.10 C
ATOM 10 O3' A A 32 -36.692 43.344 -59.609 1.00 48.71 O
ATOM 11 C2' A A 32 -35.603 43.792 -61.784 1.00 47.22 C
ATOM 12 O2' A A 32 -36.718 44.650 -62.016 1.00 47.80 O
ATOM 13 C1' A A 32 -34.304 44.534 -62.117 1.00 46.91 C
ATOM 14 N9 A A 32 -33.126 43.701 -62.476 1.00 46.69 N
ATOM 15 C8 A A 32 -31.842 43.786 -61.979 1.00 46.80 C
ATOM 16 N7 A A 32 -30.994 43.023 -62.556 1.00 46.88 N
ATOM 17 C5 A A 32 -31.720 42.348 -63.495 1.00 46.69 C
ATOM 18 C6 A A 32 -31.405 41.378 -64.481 1.00 46.98 C
ATOM 19 N6 A A 32 -30.143 40.912 -64.696 1.00 45.85 N
ATOM 20 N1 A A 32 -32.354 40.892 -65.238 1.00 47.19 N
ATOM 21 C2 A A 32 -33.601 41.328 -65.077 1.00 47.11 C
ATOM 22 N3 A A 32 -34.038 42.243 -64.216 1.00 46.69 N
ATOM 23 C4 A A 32 -33.046 42.734 -63.438 1.00 46.65 C
ATOM 24 H5'1 A A 32 -33.180 45.316 -58.418 1.00 0.00 H
ATOM 25 H5'2 A A 32 -34.296 44.061 -57.815 1.00 0.00 H
ATOM 26 H4' A A 32 -35.424 45.480 -59.491 1.00 0.00 H
ATOM 27 H3' A A 32 -34.841 42.590 -60.171 1.00 0.00 H
ATOM 28 H1' A A 32 -34.459 45.155 -62.976 1.00 0.00 H
ATOM 29 H2' A A 32 -35.772 42.908 -62.369 1.00 0.00 H
ATOM 30 HO'2 A A 32 -37.517 44.219 -61.702 1.00 0.00 H
ATOM 31 H8 A A 32 -31.600 44.454 -61.178 1.00 0.00 H
ATOM 32 H61 A A 32 -29.388 41.254 -64.145 1.00 0.00 H
ATOM 33 H62 A A 32 -29.980 40.231 -65.404 1.00 0.00 H
ATOM 34 H2 A A 32 -34.342 40.891 -65.721 1.00 0.00 H
TER
ATOM 35 P U B 33 -37.656 42.073 -59.770 1.00 51.42 P
ATOM 36 OP1 U B 33 -38.299 41.810 -58.463 1.00 50.67 O
ATOM 37 OP2 U B 33 -36.931 40.871 -60.242 1.00 52.23 O
ATOM 38 O5' U B 33 -38.728 42.532 -60.874 1.00 49.90 O
ATOM 39 C5' U B 33 -39.867 43.359 -60.538 1.00 48.30 C
ATOM 40 C4' U B 33 -40.935 43.329 -61.640 1.00 48.60 C
ATOM 41 O4' U B 33 -40.501 43.966 -62.863 1.00 48.96 O
ATOM 42 C3' U B 33 -41.306 41.899 -62.026 1.00 48.83 C
ATOM 43 O3' U B 33 -42.199 41.302 -61.056 1.00 51.07 O
ATOM 44 C2' U B 33 -41.980 42.162 -63.368 1.00 47.79 C
ATOM 45 O2' U B 33 -43.301 42.677 -63.220 1.00 47.62 O
ATOM 46 C1' U B 33 -41.042 43.212 -63.987 1.00 47.39 C
ATOM 47 N1 U B 33 -39.958 42.598 -64.815 1.00 46.48 N
ATOM 48 C2 U B 33 -40.337 41.858 -65.954 1.00 46.51 C
ATOM 49 O2 U B 33 -41.484 41.809 -66.398 1.00 46.48 O
ATOM 50 N3 U B 33 -39.319 41.142 -66.584 1.00 45.70 N
ATOM 51 C4 U B 33 -37.966 41.141 -66.264 1.00 45.26 C
ATOM 52 O4 U B 33 -37.169 40.451 -66.894 1.00 45.82 O
ATOM 53 C5 U B 33 -37.639 42.033 -65.141 1.00 45.18 C
ATOM 54 C6 U B 33 -38.609 42.711 -64.493 1.00 46.28 C
ATOM 55 H5'1 U B 33 -39.513 44.365 -60.395 1.00 0.00 H
ATOM 56 H5'2 U B 33 -40.309 42.962 -59.641 1.00 0.00 H
ATOM 57 H4' U B 33 -41.808 43.862 -61.302 1.00 0.00 H
ATOM 58 H3' U B 33 -40.440 41.279 -62.164 1.00 0.00 H
ATOM 59 H1' U B 33 -41.591 43.843 -64.656 1.00 0.00 H
ATOM 60 H2' U B 33 -42.073 41.267 -63.954 1.00 0.00 H
ATOM 61 HO'2 U B 33 -43.837 42.034 -62.749 1.00 0.00 H
ATOM 62 H6 U B 33 -38.345 43.370 -63.691 1.00 0.00 H
ATOM 63 H3 U B 33 -39.593 40.563 -67.348 1.00 0.00 H
ATOM 64 H5 U B 33 -36.623 42.151 -64.830 1.00 0.00 H
ATOM 65 P C B 34 -42.626 39.754 -61.096 1.00 53.90 P
ATOM 66 OP1 C B 34 -42.676 39.203 -62.469 1.00 52.58 O
ATOM 67 OP2 C B 34 -43.938 39.584 -60.433 1.00 53.51 O
ATOM 68 O5' C B 34 -41.481 39.048 -60.224 1.00 52.09 O
TER
Atoms:
OP1: (-31.043,41.661,-58.552)
OP2: (-30.480,43.976,-58.280)
OP3: (-31.943,42.928,-56.701)
C3': (-35.427,43.483,-60.301)
C1': (-34.304,44.534,-62.117)
C5': (-33.742,44.430,-58.660)
H2': (-35.772,42.908,-62.369)
H3': (-34.841,42.590,-60.171)
O4': (-34.007,45.320,-60.938)
C8: (-31.842,43.786,-61.979)
O2': (-36.718,44.650,-62.016)
N7: (-30.994,43.023,-62.556)
C6: (-31.405,41.378,-64.481)
C5: (-31.720,42.348,-63.495)
C4: (-33.046,42.734,-63.438)
HO'2: (-37.517,44.219,-61.702)
P: (-31.564,42.980,-58.131)
C4': (-34.706,44.744,-59.811)
C2': (-35.603,43.792,-61.784)
H5'2: (-34.296,44.061,-57.815)
C2: (-33.601,41.328,-65.077)
N1: (-32.354,40.892,-65.238)
N3: (-34.038,42.243,-64.216)
N6: (-30.143,40.912,-64.696)
H1': (-34.459,45.155,-62.976)
H4': (-35.424,45.480,-59.491)
H8: (-31.600,44.454,-61.178)
N9: (-33.126,43.701,-62.476)
H2: (-34.342,40.891,-65.721)
O5': (-32.804,43.403,-59.050)
H61: (-29.388,41.254,-64.145)
H62: (-29.980,40.231,-65.404)
O3': (-36.692,43.344,-59.609)
H5'1: (-33.180,45.316,-58.418)
OP2: (-30.480,43.976,-58.280)
OP3: (-31.943,42.928,-56.701)
C3': (-35.427,43.483,-60.301)
C1': (-34.304,44.534,-62.117)
C5': (-33.742,44.430,-58.660)
H2': (-35.772,42.908,-62.369)
H3': (-34.841,42.590,-60.171)
O4': (-34.007,45.320,-60.938)
C8: (-31.842,43.786,-61.979)
O2': (-36.718,44.650,-62.016)
N7: (-30.994,43.023,-62.556)
C6: (-31.405,41.378,-64.481)
C5: (-31.720,42.348,-63.495)
C4: (-33.046,42.734,-63.438)
HO'2: (-37.517,44.219,-61.702)
P: (-31.564,42.980,-58.131)
C4': (-34.706,44.744,-59.811)
C2': (-35.603,43.792,-61.784)
H5'2: (-34.296,44.061,-57.815)
C2: (-33.601,41.328,-65.077)
N1: (-32.354,40.892,-65.238)
N3: (-34.038,42.243,-64.216)
N6: (-30.143,40.912,-64.696)
H1': (-34.459,45.155,-62.976)
H4': (-35.424,45.480,-59.491)
H8: (-31.600,44.454,-61.178)
N9: (-33.126,43.701,-62.476)
H2: (-34.342,40.891,-65.721)
O5': (-32.804,43.403,-59.050)
H61: (-29.388,41.254,-64.145)
H62: (-29.980,40.231,-65.404)
O3': (-36.692,43.344,-59.609)
H5'1: (-33.180,45.316,-58.418)
OP1: (-38.299,41.810,-58.463)
OP2: (-36.931,40.871,-60.242)
O5': (-38.728,42.532,-60.874)
C3': (-41.306,41.899,-62.026)
C1': (-41.042,43.212,-63.987)
C5': (-39.867,43.359,-60.538)
H2': (-42.073,41.267,-63.954)
O4: (-37.169,40.451,-66.894)
O2: (-41.484,41.809,-66.398)
H3': (-40.440,41.279,-62.164)
O4': (-40.501,43.966,-62.863)
C2: (-40.337,41.858,-65.954)
C6: (-38.609,42.711,-64.493)
C5: (-37.639,42.033,-65.141)
C4: (-37.966,41.141,-66.264)
HO'2: (-43.837,42.034,-62.749)
P: (-37.656,42.073,-59.770)
C4': (-40.935,43.329,-61.640)
H5'1: (-39.513,44.365,-60.395)
H5'2: (-40.309,42.962,-59.641)
O2': (-43.301,42.677,-63.220)
N1: (-39.958,42.598,-64.815)
N3: (-39.319,41.142,-66.584)
H1': (-41.591,43.843,-64.656)
H4': (-41.808,43.862,-61.302)
H3: (-39.593,40.563,-67.348)
H6: (-38.345,43.370,-63.691)
H5: (-36.623,42.151,-64.830)
O3': (-42.199,41.302,-61.056)
C2': (-41.980,42.162,-63.368)
OP2: (-36.931,40.871,-60.242)
O5': (-38.728,42.532,-60.874)
C3': (-41.306,41.899,-62.026)
C1': (-41.042,43.212,-63.987)
C5': (-39.867,43.359,-60.538)
H2': (-42.073,41.267,-63.954)
O4: (-37.169,40.451,-66.894)
O2: (-41.484,41.809,-66.398)
H3': (-40.440,41.279,-62.164)
O4': (-40.501,43.966,-62.863)
C2: (-40.337,41.858,-65.954)
C6: (-38.609,42.711,-64.493)
C5: (-37.639,42.033,-65.141)
C4: (-37.966,41.141,-66.264)
HO'2: (-43.837,42.034,-62.749)
P: (-37.656,42.073,-59.770)
C4': (-40.935,43.329,-61.640)
H5'1: (-39.513,44.365,-60.395)
H5'2: (-40.309,42.962,-59.641)
O2': (-43.301,42.677,-63.220)
N1: (-39.958,42.598,-64.815)
N3: (-39.319,41.142,-66.584)
H1': (-41.591,43.843,-64.656)
H4': (-41.808,43.862,-61.302)
H3: (-39.593,40.563,-67.348)
H6: (-38.345,43.370,-63.691)
H5: (-36.623,42.151,-64.830)
O3': (-42.199,41.302,-61.056)
C2': (-41.980,42.162,-63.368)
Image (generated by PyMOL):