Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A225:A417
Extra
PDB:
ATOM 1 O3' C A 224 -85.795 -54.588 79.415 1.00 0.01 O
ATOM 2 P A A 225 -87.373 -54.498 79.489 1.00 0.01 P
ATOM 3 OP1 A A 225 -87.902 -55.306 78.374 1.00 0.01 O
ATOM 4 OP2 A A 225 -87.726 -53.060 79.571 1.00 0.01 O
ATOM 5 O5' A A 225 -87.701 -55.221 80.854 1.00 0.01 O
ATOM 6 C5' A A 225 -87.429 -56.598 81.007 1.00 0.01 C
ATOM 7 C4' A A 225 -87.861 -57.090 82.350 1.00 0.01 C
ATOM 8 O4' A A 225 -87.162 -56.367 83.387 1.00 0.01 O
ATOM 9 C3' A A 225 -89.335 -56.924 82.664 1.00 0.01 C
ATOM 10 O3' A A 225 -90.091 -58.018 82.164 1.00 0.01 O
ATOM 11 C2' A A 225 -89.351 -56.830 84.177 1.00 0.01 C
ATOM 12 O2' A A 225 -89.325 -58.132 84.736 1.00 0.01 O
ATOM 13 C1' A A 225 -88.011 -56.145 84.480 1.00 0.01 C
ATOM 14 N9 A A 225 -88.123 -54.687 84.666 1.00 0.01 N
ATOM 15 C8 A A 225 -87.879 -53.793 83.658 1.00 0.01 C
ATOM 16 N7 A A 225 -87.955 -52.529 83.991 1.00 0.01 N
ATOM 17 C5 A A 225 -88.240 -52.594 85.326 1.00 0.01 C
ATOM 18 C6 A A 225 -88.440 -51.547 86.221 1.00 0.01 C
ATOM 19 N6 A A 225 -88.359 -50.278 85.790 1.00 0.01 N
ATOM 20 N1 A A 225 -88.698 -51.866 87.510 1.00 0.01 N
ATOM 21 C2 A A 225 -88.746 -53.163 87.810 1.00 0.01 C
ATOM 22 N3 A A 225 -88.583 -54.250 87.043 1.00 0.01 N
ATOM 23 C4 A A 225 -88.324 -53.901 85.780 1.00 0.01 C
ATOM 24 P A A 226 -91.691 -58.001 82.184 1.00 0.01 P
ATOM 25 OP1 A A 226 -92.149 -59.397 81.987 1.00 0.01 O
ATOM 26 OP2 A A 226 -92.143 -56.951 81.241 1.00 0.01 O
ATOM 27 O5' A A 226 -91.988 -57.547 83.643 1.00 0.01 O
TER
ATOM 1 O3' C B 416 -93.717 -46.510 94.385 1.00 4.92 O
ATOM 2 P C B 417 -92.245 -47.116 94.575 1.00 0.01 P
ATOM 3 OP1 C B 417 -92.310 -48.030 95.730 1.00 0.01 O
ATOM 4 OP2 C B 417 -91.304 -45.979 94.609 1.00 0.01 O
ATOM 5 O5' C B 417 -92.013 -47.957 93.261 1.00 0.01 O
ATOM 6 C5' C B 417 -91.997 -49.367 93.313 1.00 0.01 C
ATOM 7 C4' C B 417 -91.250 -49.950 92.142 1.00 0.01 C
ATOM 8 O4' C B 417 -91.647 -49.274 90.919 1.00 0.01 O
ATOM 9 C3' C B 417 -89.746 -49.790 92.171 1.00 0.01 C
ATOM 10 O3' C B 417 -89.114 -50.769 92.951 1.00 0.01 O
ATOM 11 C2' C B 417 -89.388 -49.902 90.719 1.00 0.01 C
ATOM 12 O2' C B 417 -89.455 -51.258 90.329 1.00 0.01 O
ATOM 13 C1' C B 417 -90.540 -49.162 90.064 1.00 0.01 C
ATOM 14 N1 C B 417 -90.249 -47.735 89.856 1.00 0.01 N
ATOM 15 C2 C B 417 -89.374 -47.381 88.840 1.00 0.01 C
ATOM 16 O2 C B 417 -88.839 -48.296 88.194 1.00 0.01 O
ATOM 17 N3 C B 417 -89.109 -46.068 88.614 1.00 0.01 N
ATOM 18 C4 C B 417 -89.703 -45.127 89.340 1.00 0.01 C
ATOM 19 N4 C B 417 -89.427 -43.848 89.080 1.00 0.01 N
ATOM 20 C5 C B 417 -90.614 -45.470 90.367 1.00 0.01 C
ATOM 21 C6 C B 417 -90.854 -46.764 90.589 1.00 0.01 C
ATOM 22 P U B 418 -87.575 -50.577 93.354 1.00 0.01 P
ATOM 23 OP1 U B 418 -87.117 -51.854 93.934 1.00 0.01 O
ATOM 24 OP2 U B 418 -87.490 -49.350 94.170 1.00 0.01 O
ATOM 25 O5' U B 418 -86.861 -50.334 91.965 1.00 0.01 O
TER
ATOM 2 P A A 225 -87.373 -54.498 79.489 1.00 0.01 P
ATOM 3 OP1 A A 225 -87.902 -55.306 78.374 1.00 0.01 O
ATOM 4 OP2 A A 225 -87.726 -53.060 79.571 1.00 0.01 O
ATOM 5 O5' A A 225 -87.701 -55.221 80.854 1.00 0.01 O
ATOM 6 C5' A A 225 -87.429 -56.598 81.007 1.00 0.01 C
ATOM 7 C4' A A 225 -87.861 -57.090 82.350 1.00 0.01 C
ATOM 8 O4' A A 225 -87.162 -56.367 83.387 1.00 0.01 O
ATOM 9 C3' A A 225 -89.335 -56.924 82.664 1.00 0.01 C
ATOM 10 O3' A A 225 -90.091 -58.018 82.164 1.00 0.01 O
ATOM 11 C2' A A 225 -89.351 -56.830 84.177 1.00 0.01 C
ATOM 12 O2' A A 225 -89.325 -58.132 84.736 1.00 0.01 O
ATOM 13 C1' A A 225 -88.011 -56.145 84.480 1.00 0.01 C
ATOM 14 N9 A A 225 -88.123 -54.687 84.666 1.00 0.01 N
ATOM 15 C8 A A 225 -87.879 -53.793 83.658 1.00 0.01 C
ATOM 16 N7 A A 225 -87.955 -52.529 83.991 1.00 0.01 N
ATOM 17 C5 A A 225 -88.240 -52.594 85.326 1.00 0.01 C
ATOM 18 C6 A A 225 -88.440 -51.547 86.221 1.00 0.01 C
ATOM 19 N6 A A 225 -88.359 -50.278 85.790 1.00 0.01 N
ATOM 20 N1 A A 225 -88.698 -51.866 87.510 1.00 0.01 N
ATOM 21 C2 A A 225 -88.746 -53.163 87.810 1.00 0.01 C
ATOM 22 N3 A A 225 -88.583 -54.250 87.043 1.00 0.01 N
ATOM 23 C4 A A 225 -88.324 -53.901 85.780 1.00 0.01 C
ATOM 24 P A A 226 -91.691 -58.001 82.184 1.00 0.01 P
ATOM 25 OP1 A A 226 -92.149 -59.397 81.987 1.00 0.01 O
ATOM 26 OP2 A A 226 -92.143 -56.951 81.241 1.00 0.01 O
ATOM 27 O5' A A 226 -91.988 -57.547 83.643 1.00 0.01 O
TER
ATOM 1 O3' C B 416 -93.717 -46.510 94.385 1.00 4.92 O
ATOM 2 P C B 417 -92.245 -47.116 94.575 1.00 0.01 P
ATOM 3 OP1 C B 417 -92.310 -48.030 95.730 1.00 0.01 O
ATOM 4 OP2 C B 417 -91.304 -45.979 94.609 1.00 0.01 O
ATOM 5 O5' C B 417 -92.013 -47.957 93.261 1.00 0.01 O
ATOM 6 C5' C B 417 -91.997 -49.367 93.313 1.00 0.01 C
ATOM 7 C4' C B 417 -91.250 -49.950 92.142 1.00 0.01 C
ATOM 8 O4' C B 417 -91.647 -49.274 90.919 1.00 0.01 O
ATOM 9 C3' C B 417 -89.746 -49.790 92.171 1.00 0.01 C
ATOM 10 O3' C B 417 -89.114 -50.769 92.951 1.00 0.01 O
ATOM 11 C2' C B 417 -89.388 -49.902 90.719 1.00 0.01 C
ATOM 12 O2' C B 417 -89.455 -51.258 90.329 1.00 0.01 O
ATOM 13 C1' C B 417 -90.540 -49.162 90.064 1.00 0.01 C
ATOM 14 N1 C B 417 -90.249 -47.735 89.856 1.00 0.01 N
ATOM 15 C2 C B 417 -89.374 -47.381 88.840 1.00 0.01 C
ATOM 16 O2 C B 417 -88.839 -48.296 88.194 1.00 0.01 O
ATOM 17 N3 C B 417 -89.109 -46.068 88.614 1.00 0.01 N
ATOM 18 C4 C B 417 -89.703 -45.127 89.340 1.00 0.01 C
ATOM 19 N4 C B 417 -89.427 -43.848 89.080 1.00 0.01 N
ATOM 20 C5 C B 417 -90.614 -45.470 90.367 1.00 0.01 C
ATOM 21 C6 C B 417 -90.854 -46.764 90.589 1.00 0.01 C
ATOM 22 P U B 418 -87.575 -50.577 93.354 1.00 0.01 P
ATOM 23 OP1 U B 418 -87.117 -51.854 93.934 1.00 0.01 O
ATOM 24 OP2 U B 418 -87.490 -49.350 94.170 1.00 0.01 O
ATOM 25 O5' U B 418 -86.861 -50.334 91.965 1.00 0.01 O
TER
Atoms:
OP1: (-87.902,-55.306,78.374)
OP2: (-87.726,-53.060,79.571)
C3': (-89.335,-56.924,82.664)
C1': (-88.011,-56.145,84.480)
C5': (-87.429,-56.598,81.007)
O4': (-87.162,-56.367,83.387)
C8: (-87.879,-53.793,83.658)
O2': (-89.325,-58.132,84.736)
C6: (-88.440,-51.547,86.221)
C5: (-88.240,-52.594,85.326)
C4: (-88.324,-53.901,85.780)
P: (-87.373,-54.498,79.489)
C4': (-87.861,-57.090,82.350)
C2': (-89.351,-56.830,84.177)
C2: (-88.746,-53.163,87.810)
N1: (-88.698,-51.866,87.510)
N3: (-88.583,-54.250,87.043)
N6: (-88.359,-50.278,85.790)
N7: (-87.955,-52.529,83.991)
N9: (-88.123,-54.687,84.666)
O5': (-87.701,-55.221,80.854)
O3': (-90.091,-58.018,82.164)
OP2: (-87.726,-53.060,79.571)
C3': (-89.335,-56.924,82.664)
C1': (-88.011,-56.145,84.480)
C5': (-87.429,-56.598,81.007)
O4': (-87.162,-56.367,83.387)
C8: (-87.879,-53.793,83.658)
O2': (-89.325,-58.132,84.736)
C6: (-88.440,-51.547,86.221)
C5: (-88.240,-52.594,85.326)
C4: (-88.324,-53.901,85.780)
P: (-87.373,-54.498,79.489)
C4': (-87.861,-57.090,82.350)
C2': (-89.351,-56.830,84.177)
C2: (-88.746,-53.163,87.810)
N1: (-88.698,-51.866,87.510)
N3: (-88.583,-54.250,87.043)
N6: (-88.359,-50.278,85.790)
N7: (-87.955,-52.529,83.991)
N9: (-88.123,-54.687,84.666)
O5': (-87.701,-55.221,80.854)
O3': (-90.091,-58.018,82.164)
C2: (-89.374,-47.381,88.840)
OP1: (-92.310,-48.030,95.730)
OP2: (-91.304,-45.979,94.609)
C4: (-89.703,-45.127,89.340)
O5': (-92.013,-47.957,93.261)
C3': (-89.746,-49.790,92.171)
C1': (-90.540,-49.162,90.064)
O4': (-91.647,-49.274,90.919)
C5': (-91.997,-49.367,93.313)
P: (-92.245,-47.116,94.575)
O2: (-88.839,-48.296,88.194)
C4': (-91.250,-49.950,92.142)
C2': (-89.388,-49.902,90.719)
O2': (-89.455,-51.258,90.329)
N1: (-90.249,-47.735,89.856)
N3: (-89.109,-46.068,88.614)
N4: (-89.427,-43.848,89.080)
C6: (-90.854,-46.764,90.589)
C5: (-90.614,-45.470,90.367)
O3': (-89.114,-50.769,92.951)
OP1: (-92.310,-48.030,95.730)
OP2: (-91.304,-45.979,94.609)
C4: (-89.703,-45.127,89.340)
O5': (-92.013,-47.957,93.261)
C3': (-89.746,-49.790,92.171)
C1': (-90.540,-49.162,90.064)
O4': (-91.647,-49.274,90.919)
C5': (-91.997,-49.367,93.313)
P: (-92.245,-47.116,94.575)
O2: (-88.839,-48.296,88.194)
C4': (-91.250,-49.950,92.142)
C2': (-89.388,-49.902,90.719)
O2': (-89.455,-51.258,90.329)
N1: (-90.249,-47.735,89.856)
N3: (-89.109,-46.068,88.614)
N4: (-89.427,-43.848,89.080)
C6: (-90.854,-46.764,90.589)
C5: (-90.614,-45.470,90.367)
O3': (-89.114,-50.769,92.951)
Image (generated by PyMOL):