Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A482:A483
Extra
PDB:
ATOM 1 O3' U A 481 25.002 177.702 77.049 1.00 61.59 O
ATOM 2 P C A 482 26.296 178.646 77.213 1.00 62.45 P
ATOM 3 OP1 C A 482 26.495 179.002 78.635 1.00 61.62 O
ATOM 4 OP2 C A 482 26.118 179.710 76.208 1.00 62.97 O
ATOM 5 O5' C A 482 27.521 177.733 76.775 1.00 62.03 O
ATOM 6 C5' C A 482 27.928 176.601 77.567 1.00 62.79 C
ATOM 7 C4' C A 482 29.092 175.912 76.907 1.00 63.72 C
ATOM 8 O4' C A 482 28.651 175.266 75.684 1.00 64.61 O
ATOM 9 C3' C A 482 30.201 176.844 76.441 1.00 64.93 C
ATOM 10 O3' C A 482 31.100 177.199 77.496 1.00 65.92 O
ATOM 11 C2' C A 482 30.898 176.001 75.387 1.00 65.26 C
ATOM 12 O2' C A 482 31.765 175.057 75.972 1.00 66.13 O
ATOM 13 C1' C A 482 29.714 175.274 74.741 1.00 65.65 C
ATOM 14 N1 C A 482 29.255 175.900 73.481 1.00 67.32 N
ATOM 15 C2 C A 482 29.619 175.303 72.264 1.00 67.80 C
ATOM 16 O2 C A 482 30.290 174.259 72.276 1.00 68.15 O
ATOM 17 N3 C A 482 29.236 175.877 71.103 1.00 68.73 N
ATOM 18 C4 C A 482 28.518 177.002 71.117 1.00 69.13 C
ATOM 19 N4 C A 482 28.179 177.547 69.940 1.00 69.23 N
ATOM 20 C5 C A 482 28.119 177.626 72.336 1.00 69.07 C
ATOM 21 C6 C A 482 28.505 177.047 73.485 1.00 68.20 C
ATOM 22 P A A 483 31.769 178.668 77.531 1.00 65.66 P
ATOM 23 OP1 A A 483 32.409 178.880 78.845 1.00 65.63 O
ATOM 24 OP2 A A 483 30.766 179.642 77.048 1.00 66.73 O
ATOM 25 O5' A A 483 32.939 178.625 76.462 1.00 64.75 O
TER
ATOM 1 O3' C B 482 31.100 177.199 77.496 1.00 65.92 O
ATOM 2 P A B 483 31.769 178.668 77.531 1.00 65.66 P
ATOM 3 OP1 A B 483 32.409 178.880 78.845 1.00 65.63 O
ATOM 4 OP2 A B 483 30.766 179.642 77.048 1.00 66.73 O
ATOM 5 O5' A B 483 32.939 178.625 76.462 1.00 64.75 O
ATOM 6 C5' A B 483 33.574 179.845 76.053 1.00 67.07 C
ATOM 7 C4' A B 483 34.681 179.548 75.086 1.00 68.71 C
ATOM 8 O4' A B 483 35.734 178.851 75.790 1.00 69.91 O
ATOM 9 C3' A B 483 34.303 178.615 73.952 1.00 70.54 C
ATOM 10 O3' A B 483 33.725 179.373 72.895 1.00 73.21 O
ATOM 11 C2' A B 483 35.652 178.017 73.564 1.00 69.94 C
ATOM 12 O2' A B 483 36.416 178.885 72.750 1.00 68.83 O
ATOM 13 C1' A B 483 36.342 177.908 74.927 1.00 69.38 C
ATOM 14 N9 A B 483 36.278 176.593 75.562 1.00 68.07 N
ATOM 15 C8 A B 483 35.508 176.176 76.629 1.00 68.53 C
ATOM 16 N7 A B 483 35.712 174.924 76.968 1.00 68.95 N
ATOM 17 C5 A B 483 36.670 174.487 76.058 1.00 67.91 C
ATOM 18 C6 A B 483 37.308 173.245 75.871 1.00 67.30 C
ATOM 19 N6 A B 483 37.053 172.157 76.603 1.00 66.24 N
ATOM 20 N1 A B 483 38.220 173.156 74.883 1.00 67.19 N
ATOM 21 C2 A B 483 38.458 174.234 74.130 1.00 67.50 C
ATOM 22 N3 A B 483 37.915 175.448 74.195 1.00 67.43 N
ATOM 23 C4 A B 483 37.024 175.508 75.192 1.00 67.48 C
ATOM 24 P G B 484 32.372 178.876 72.178 1.00 74.90 P
ATOM 25 OP1 G B 484 31.814 180.088 71.527 1.00 75.40 O
ATOM 26 OP2 G B 484 31.537 178.120 73.149 1.00 74.33 O
ATOM 27 O5' G B 484 32.888 177.890 71.039 1.00 74.53 O
TER
ATOM 2 P C A 482 26.296 178.646 77.213 1.00 62.45 P
ATOM 3 OP1 C A 482 26.495 179.002 78.635 1.00 61.62 O
ATOM 4 OP2 C A 482 26.118 179.710 76.208 1.00 62.97 O
ATOM 5 O5' C A 482 27.521 177.733 76.775 1.00 62.03 O
ATOM 6 C5' C A 482 27.928 176.601 77.567 1.00 62.79 C
ATOM 7 C4' C A 482 29.092 175.912 76.907 1.00 63.72 C
ATOM 8 O4' C A 482 28.651 175.266 75.684 1.00 64.61 O
ATOM 9 C3' C A 482 30.201 176.844 76.441 1.00 64.93 C
ATOM 10 O3' C A 482 31.100 177.199 77.496 1.00 65.92 O
ATOM 11 C2' C A 482 30.898 176.001 75.387 1.00 65.26 C
ATOM 12 O2' C A 482 31.765 175.057 75.972 1.00 66.13 O
ATOM 13 C1' C A 482 29.714 175.274 74.741 1.00 65.65 C
ATOM 14 N1 C A 482 29.255 175.900 73.481 1.00 67.32 N
ATOM 15 C2 C A 482 29.619 175.303 72.264 1.00 67.80 C
ATOM 16 O2 C A 482 30.290 174.259 72.276 1.00 68.15 O
ATOM 17 N3 C A 482 29.236 175.877 71.103 1.00 68.73 N
ATOM 18 C4 C A 482 28.518 177.002 71.117 1.00 69.13 C
ATOM 19 N4 C A 482 28.179 177.547 69.940 1.00 69.23 N
ATOM 20 C5 C A 482 28.119 177.626 72.336 1.00 69.07 C
ATOM 21 C6 C A 482 28.505 177.047 73.485 1.00 68.20 C
ATOM 22 P A A 483 31.769 178.668 77.531 1.00 65.66 P
ATOM 23 OP1 A A 483 32.409 178.880 78.845 1.00 65.63 O
ATOM 24 OP2 A A 483 30.766 179.642 77.048 1.00 66.73 O
ATOM 25 O5' A A 483 32.939 178.625 76.462 1.00 64.75 O
TER
ATOM 1 O3' C B 482 31.100 177.199 77.496 1.00 65.92 O
ATOM 2 P A B 483 31.769 178.668 77.531 1.00 65.66 P
ATOM 3 OP1 A B 483 32.409 178.880 78.845 1.00 65.63 O
ATOM 4 OP2 A B 483 30.766 179.642 77.048 1.00 66.73 O
ATOM 5 O5' A B 483 32.939 178.625 76.462 1.00 64.75 O
ATOM 6 C5' A B 483 33.574 179.845 76.053 1.00 67.07 C
ATOM 7 C4' A B 483 34.681 179.548 75.086 1.00 68.71 C
ATOM 8 O4' A B 483 35.734 178.851 75.790 1.00 69.91 O
ATOM 9 C3' A B 483 34.303 178.615 73.952 1.00 70.54 C
ATOM 10 O3' A B 483 33.725 179.373 72.895 1.00 73.21 O
ATOM 11 C2' A B 483 35.652 178.017 73.564 1.00 69.94 C
ATOM 12 O2' A B 483 36.416 178.885 72.750 1.00 68.83 O
ATOM 13 C1' A B 483 36.342 177.908 74.927 1.00 69.38 C
ATOM 14 N9 A B 483 36.278 176.593 75.562 1.00 68.07 N
ATOM 15 C8 A B 483 35.508 176.176 76.629 1.00 68.53 C
ATOM 16 N7 A B 483 35.712 174.924 76.968 1.00 68.95 N
ATOM 17 C5 A B 483 36.670 174.487 76.058 1.00 67.91 C
ATOM 18 C6 A B 483 37.308 173.245 75.871 1.00 67.30 C
ATOM 19 N6 A B 483 37.053 172.157 76.603 1.00 66.24 N
ATOM 20 N1 A B 483 38.220 173.156 74.883 1.00 67.19 N
ATOM 21 C2 A B 483 38.458 174.234 74.130 1.00 67.50 C
ATOM 22 N3 A B 483 37.915 175.448 74.195 1.00 67.43 N
ATOM 23 C4 A B 483 37.024 175.508 75.192 1.00 67.48 C
ATOM 24 P G B 484 32.372 178.876 72.178 1.00 74.90 P
ATOM 25 OP1 G B 484 31.814 180.088 71.527 1.00 75.40 O
ATOM 26 OP2 G B 484 31.537 178.120 73.149 1.00 74.33 O
ATOM 27 O5' G B 484 32.888 177.890 71.039 1.00 74.53 O
TER
Atoms:
C2: (29.619,175.303,72.264)
OP1: (26.495,179.002,78.635)
OP2: (26.118,179.710,76.208)
C4: (28.518,177.002,71.117)
O5': (27.521,177.733,76.775)
C3': (30.201,176.844,76.441)
C1': (29.714,175.274,74.741)
O4': (28.651,175.266,75.684)
C5': (27.928,176.601,77.567)
P: (26.296,178.646,77.213)
O2: (30.290,174.259,72.276)
C4': (29.092,175.912,76.907)
C2': (30.898,176.001,75.387)
O2': (31.765,175.057,75.972)
N1: (29.255,175.900,73.481)
N3: (29.236,175.877,71.103)
N4: (28.179,177.547,69.940)
C6: (28.505,177.047,73.485)
C5: (28.119,177.626,72.336)
O3': (31.100,177.199,77.496)
OP1: (26.495,179.002,78.635)
OP2: (26.118,179.710,76.208)
C4: (28.518,177.002,71.117)
O5': (27.521,177.733,76.775)
C3': (30.201,176.844,76.441)
C1': (29.714,175.274,74.741)
O4': (28.651,175.266,75.684)
C5': (27.928,176.601,77.567)
P: (26.296,178.646,77.213)
O2: (30.290,174.259,72.276)
C4': (29.092,175.912,76.907)
C2': (30.898,176.001,75.387)
O2': (31.765,175.057,75.972)
N1: (29.255,175.900,73.481)
N3: (29.236,175.877,71.103)
N4: (28.179,177.547,69.940)
C6: (28.505,177.047,73.485)
C5: (28.119,177.626,72.336)
O3': (31.100,177.199,77.496)
OP1: (32.409,178.880,78.845)
OP2: (30.766,179.642,77.048)
C3': (34.303,178.615,73.952)
C1': (36.342,177.908,74.927)
C5': (33.574,179.845,76.053)
O4': (35.734,178.851,75.790)
C8: (35.508,176.176,76.629)
O2': (36.416,178.885,72.750)
C6: (37.308,173.245,75.871)
C5: (36.670,174.487,76.058)
C4: (37.024,175.508,75.192)
P: (31.769,178.668,77.531)
C4': (34.681,179.548,75.086)
C2': (35.652,178.017,73.564)
C2: (38.458,174.234,74.130)
N1: (38.220,173.156,74.883)
N3: (37.915,175.448,74.195)
N6: (37.053,172.157,76.603)
N7: (35.712,174.924,76.968)
N9: (36.278,176.593,75.562)
O5': (32.939,178.625,76.462)
O3': (33.725,179.373,72.895)
OP2: (30.766,179.642,77.048)
C3': (34.303,178.615,73.952)
C1': (36.342,177.908,74.927)
C5': (33.574,179.845,76.053)
O4': (35.734,178.851,75.790)
C8: (35.508,176.176,76.629)
O2': (36.416,178.885,72.750)
C6: (37.308,173.245,75.871)
C5: (36.670,174.487,76.058)
C4: (37.024,175.508,75.192)
P: (31.769,178.668,77.531)
C4': (34.681,179.548,75.086)
C2': (35.652,178.017,73.564)
C2: (38.458,174.234,74.130)
N1: (38.220,173.156,74.883)
N3: (37.915,175.448,74.195)
N6: (37.053,172.157,76.603)
N7: (35.712,174.924,76.968)
N9: (36.278,176.593,75.562)
O5': (32.939,178.625,76.462)
O3': (33.725,179.373,72.895)
Image (generated by PyMOL):