Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01190:02339
Extra
PDB:
ATOM 1 O3' A A1189 51.887 108.245 135.278 1.00 38.66 O
ATOM 2 P A A1190 52.330 109.760 135.576 1.00 40.96 P
ATOM 3 OP1 A A1190 52.768 109.877 136.984 1.00 41.06 O
ATOM 4 OP2 A A1190 51.252 110.648 135.076 1.00 40.64 O
ATOM 5 O5' A A1190 53.635 109.948 134.678 1.00 40.74 O
ATOM 6 C5' A A1190 53.542 110.229 133.265 1.00 39.11 C
ATOM 7 C4' A A1190 54.547 111.288 132.885 1.00 38.10 C
ATOM 8 O4' A A1190 55.881 110.742 132.999 1.00 39.33 O
ATOM 9 C3' A A1190 54.526 111.757 131.445 1.00 37.73 C
ATOM 10 O3' A A1190 53.478 112.693 131.242 1.00 37.74 O
ATOM 11 C2' A A1190 55.896 112.414 131.314 1.00 38.19 C
ATOM 12 O2' A A1190 55.934 113.703 131.890 1.00 37.77 O
ATOM 13 C1' A A1190 56.757 111.489 132.177 1.00 39.22 C
ATOM 14 N9 A A1190 57.608 110.560 131.438 1.00 40.45 N
ATOM 15 C8 A A1190 57.329 109.869 130.286 1.00 41.72 C
ATOM 16 N7 A A1190 58.317 109.115 129.870 1.00 42.13 N
ATOM 17 C5 A A1190 59.313 109.323 130.812 1.00 42.80 C
ATOM 18 C6 A A1190 60.617 108.813 130.941 1.00 43.23 C
ATOM 19 N6 A A1190 61.164 107.946 130.088 1.00 42.14 N
ATOM 20 N1 A A1190 61.351 109.228 131.997 1.00 44.54 N
ATOM 21 C2 A A1190 60.802 110.089 132.860 1.00 43.26 C
ATOM 22 N3 A A1190 59.588 110.635 132.848 1.00 43.03 N
ATOM 23 C4 A A1190 58.887 110.208 131.785 1.00 42.02 C
ATOM 24 P A A1191 52.715 112.747 129.828 1.00 37.99 P
ATOM 25 OP1 A A1191 51.415 113.423 130.072 1.00 37.80 O
ATOM 26 OP2 A A1191 52.739 111.389 129.226 1.00 37.48 O
ATOM 27 O5' A A1191 53.617 113.702 128.934 1.00 34.70 O
TER
ATOM 1 O3' A B2338 69.903 109.990 129.287 1.00 49.81 O
ATOM 2 P C B2339 70.209 109.181 130.644 1.00 51.53 P
ATOM 3 OP1 C B2339 70.946 110.120 131.531 1.00 51.52 O
ATOM 4 OP2 C B2339 70.809 107.862 130.309 1.00 49.66 O
ATOM 5 O5' C B2339 68.764 108.932 131.269 1.00 50.19 O
ATOM 6 C5' C B2339 67.948 110.044 131.675 1.00 49.90 C
ATOM 7 C4' C B2339 66.522 109.604 131.909 1.00 50.36 C
ATOM 8 O4' C B2339 65.931 109.147 130.663 1.00 50.47 O
ATOM 9 C3' C B2339 66.298 108.427 132.844 1.00 50.01 C
ATOM 10 O3' C B2339 66.394 108.770 134.216 1.00 51.84 O
ATOM 11 C2' C B2339 64.890 108.006 132.457 1.00 48.36 C
ATOM 12 O2' C B2339 63.911 108.896 132.953 1.00 48.06 O
ATOM 13 C1' C B2339 64.965 108.142 130.938 1.00 46.92 C
ATOM 14 N1 C B2339 65.411 106.877 130.338 1.00 43.76 N
ATOM 15 C2 C B2339 64.462 105.883 130.102 1.00 43.43 C
ATOM 16 O2 C B2339 63.272 106.117 130.358 1.00 43.00 O
ATOM 17 N3 C B2339 64.862 104.695 129.601 1.00 42.50 N
ATOM 18 C4 C B2339 66.149 104.488 129.324 1.00 41.95 C
ATOM 19 N4 C B2339 66.498 103.294 128.844 1.00 43.34 N
ATOM 20 C5 C B2339 67.136 105.493 129.531 1.00 41.36 C
ATOM 21 C6 C B2339 66.727 106.661 130.034 1.00 42.41 C
ATOM 22 P U B2340 66.716 107.624 135.299 1.00 53.22 P
ATOM 23 OP1 U B2340 66.988 108.335 136.572 1.00 55.70 O
ATOM 24 OP2 U B2340 67.726 106.676 134.751 1.00 51.65 O
ATOM 25 O5' U B2340 65.348 106.820 135.448 1.00 52.37 O
TER
ATOM 2 P A A1190 52.330 109.760 135.576 1.00 40.96 P
ATOM 3 OP1 A A1190 52.768 109.877 136.984 1.00 41.06 O
ATOM 4 OP2 A A1190 51.252 110.648 135.076 1.00 40.64 O
ATOM 5 O5' A A1190 53.635 109.948 134.678 1.00 40.74 O
ATOM 6 C5' A A1190 53.542 110.229 133.265 1.00 39.11 C
ATOM 7 C4' A A1190 54.547 111.288 132.885 1.00 38.10 C
ATOM 8 O4' A A1190 55.881 110.742 132.999 1.00 39.33 O
ATOM 9 C3' A A1190 54.526 111.757 131.445 1.00 37.73 C
ATOM 10 O3' A A1190 53.478 112.693 131.242 1.00 37.74 O
ATOM 11 C2' A A1190 55.896 112.414 131.314 1.00 38.19 C
ATOM 12 O2' A A1190 55.934 113.703 131.890 1.00 37.77 O
ATOM 13 C1' A A1190 56.757 111.489 132.177 1.00 39.22 C
ATOM 14 N9 A A1190 57.608 110.560 131.438 1.00 40.45 N
ATOM 15 C8 A A1190 57.329 109.869 130.286 1.00 41.72 C
ATOM 16 N7 A A1190 58.317 109.115 129.870 1.00 42.13 N
ATOM 17 C5 A A1190 59.313 109.323 130.812 1.00 42.80 C
ATOM 18 C6 A A1190 60.617 108.813 130.941 1.00 43.23 C
ATOM 19 N6 A A1190 61.164 107.946 130.088 1.00 42.14 N
ATOM 20 N1 A A1190 61.351 109.228 131.997 1.00 44.54 N
ATOM 21 C2 A A1190 60.802 110.089 132.860 1.00 43.26 C
ATOM 22 N3 A A1190 59.588 110.635 132.848 1.00 43.03 N
ATOM 23 C4 A A1190 58.887 110.208 131.785 1.00 42.02 C
ATOM 24 P A A1191 52.715 112.747 129.828 1.00 37.99 P
ATOM 25 OP1 A A1191 51.415 113.423 130.072 1.00 37.80 O
ATOM 26 OP2 A A1191 52.739 111.389 129.226 1.00 37.48 O
ATOM 27 O5' A A1191 53.617 113.702 128.934 1.00 34.70 O
TER
ATOM 1 O3' A B2338 69.903 109.990 129.287 1.00 49.81 O
ATOM 2 P C B2339 70.209 109.181 130.644 1.00 51.53 P
ATOM 3 OP1 C B2339 70.946 110.120 131.531 1.00 51.52 O
ATOM 4 OP2 C B2339 70.809 107.862 130.309 1.00 49.66 O
ATOM 5 O5' C B2339 68.764 108.932 131.269 1.00 50.19 O
ATOM 6 C5' C B2339 67.948 110.044 131.675 1.00 49.90 C
ATOM 7 C4' C B2339 66.522 109.604 131.909 1.00 50.36 C
ATOM 8 O4' C B2339 65.931 109.147 130.663 1.00 50.47 O
ATOM 9 C3' C B2339 66.298 108.427 132.844 1.00 50.01 C
ATOM 10 O3' C B2339 66.394 108.770 134.216 1.00 51.84 O
ATOM 11 C2' C B2339 64.890 108.006 132.457 1.00 48.36 C
ATOM 12 O2' C B2339 63.911 108.896 132.953 1.00 48.06 O
ATOM 13 C1' C B2339 64.965 108.142 130.938 1.00 46.92 C
ATOM 14 N1 C B2339 65.411 106.877 130.338 1.00 43.76 N
ATOM 15 C2 C B2339 64.462 105.883 130.102 1.00 43.43 C
ATOM 16 O2 C B2339 63.272 106.117 130.358 1.00 43.00 O
ATOM 17 N3 C B2339 64.862 104.695 129.601 1.00 42.50 N
ATOM 18 C4 C B2339 66.149 104.488 129.324 1.00 41.95 C
ATOM 19 N4 C B2339 66.498 103.294 128.844 1.00 43.34 N
ATOM 20 C5 C B2339 67.136 105.493 129.531 1.00 41.36 C
ATOM 21 C6 C B2339 66.727 106.661 130.034 1.00 42.41 C
ATOM 22 P U B2340 66.716 107.624 135.299 1.00 53.22 P
ATOM 23 OP1 U B2340 66.988 108.335 136.572 1.00 55.70 O
ATOM 24 OP2 U B2340 67.726 106.676 134.751 1.00 51.65 O
ATOM 25 O5' U B2340 65.348 106.820 135.448 1.00 52.37 O
TER
Atoms:
OP1: (52.768,109.877,136.984)
OP2: (51.252,110.648,135.076)
C3': (54.526,111.757,131.445)
C1': (56.757,111.489,132.177)
C5': (53.542,110.229,133.265)
O4': (55.881,110.742,132.999)
C8: (57.329,109.869,130.286)
O2': (55.934,113.703,131.890)
C6: (60.617,108.813,130.941)
C5: (59.313,109.323,130.812)
C4: (58.887,110.208,131.785)
P: (52.330,109.760,135.576)
C4': (54.547,111.288,132.885)
C2': (55.896,112.414,131.314)
C2: (60.802,110.089,132.860)
N1: (61.351,109.228,131.997)
N3: (59.588,110.635,132.848)
N6: (61.164,107.946,130.088)
N7: (58.317,109.115,129.870)
N9: (57.608,110.560,131.438)
O5': (53.635,109.948,134.678)
O3': (53.478,112.693,131.242)
OP2: (51.252,110.648,135.076)
C3': (54.526,111.757,131.445)
C1': (56.757,111.489,132.177)
C5': (53.542,110.229,133.265)
O4': (55.881,110.742,132.999)
C8: (57.329,109.869,130.286)
O2': (55.934,113.703,131.890)
C6: (60.617,108.813,130.941)
C5: (59.313,109.323,130.812)
C4: (58.887,110.208,131.785)
P: (52.330,109.760,135.576)
C4': (54.547,111.288,132.885)
C2': (55.896,112.414,131.314)
C2: (60.802,110.089,132.860)
N1: (61.351,109.228,131.997)
N3: (59.588,110.635,132.848)
N6: (61.164,107.946,130.088)
N7: (58.317,109.115,129.870)
N9: (57.608,110.560,131.438)
O5': (53.635,109.948,134.678)
O3': (53.478,112.693,131.242)
C2: (64.462,105.883,130.102)
OP1: (70.946,110.120,131.531)
OP2: (70.809,107.862,130.309)
C4: (66.149,104.488,129.324)
O5': (68.764,108.932,131.269)
C3': (66.298,108.427,132.844)
C1': (64.965,108.142,130.938)
O4': (65.931,109.147,130.663)
C5': (67.948,110.044,131.675)
P: (70.209,109.181,130.644)
O2: (63.272,106.117,130.358)
C4': (66.522,109.604,131.909)
C2': (64.890,108.006,132.457)
O2': (63.911,108.896,132.953)
N1: (65.411,106.877,130.338)
N3: (64.862,104.695,129.601)
N4: (66.498,103.294,128.844)
C6: (66.727,106.661,130.034)
C5: (67.136,105.493,129.531)
O3': (66.394,108.770,134.216)
OP1: (70.946,110.120,131.531)
OP2: (70.809,107.862,130.309)
C4: (66.149,104.488,129.324)
O5': (68.764,108.932,131.269)
C3': (66.298,108.427,132.844)
C1': (64.965,108.142,130.938)
O4': (65.931,109.147,130.663)
C5': (67.948,110.044,131.675)
P: (70.209,109.181,130.644)
O2: (63.272,106.117,130.358)
C4': (66.522,109.604,131.909)
C2': (64.890,108.006,132.457)
O2': (63.911,108.896,132.953)
N1: (65.411,106.877,130.338)
N3: (64.862,104.695,129.601)
N4: (66.498,103.294,128.844)
C6: (66.727,106.661,130.034)
C5: (67.136,105.493,129.531)
O3': (66.394,108.770,134.216)
Image (generated by PyMOL):