ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01083:01042

Extra

PDB:
ATOM 1 O3' A A1082 35.970 99.079 120.885 1.00 57.28 O
ATOM 2 P A A1083 34.721 98.486 120.054 1.00 58.96 P
ATOM 3 OP1 A A1083 34.986 98.881 118.646 1.00 59.34 O
ATOM 4 OP2 A A1083 33.428 98.864 120.695 1.00 60.13 O
ATOM 5 O5' A A1083 34.882 96.910 120.187 1.00 54.91 O
ATOM 6 C5' A A1083 36.134 96.300 119.905 1.00 48.84 C
ATOM 7 C4' A A1083 35.940 94.893 119.420 1.00 46.54 C
ATOM 8 O4' A A1083 34.725 94.774 118.636 1.00 44.27 O
ATOM 9 C3' A A1083 37.051 94.504 118.471 1.00 45.88 C
ATOM 10 O3' A A1083 38.201 94.103 119.184 1.00 45.65 O
ATOM 11 C2' A A1083 36.401 93.436 117.610 1.00 44.14 C
ATOM 12 O2' A A1083 36.334 92.183 118.251 1.00 44.45 O
ATOM 13 C1' A A1083 34.988 94.008 117.466 1.00 42.99 C
ATOM 14 N9 A A1083 34.826 94.894 116.309 1.00 40.95 N
ATOM 15 C8 A A1083 34.433 96.214 116.330 1.00 38.20 C
ATOM 16 N7 A A1083 34.344 96.757 115.144 1.00 37.42 N
ATOM 17 C5 A A1083 34.703 95.733 114.280 1.00 34.69 C
ATOM 18 C6 A A1083 34.790 95.674 112.884 1.00 32.56 C
ATOM 19 N6 A A1083 34.496 96.696 112.088 1.00 32.30 N
ATOM 20 N1 A A1083 35.187 94.512 112.326 1.00 33.09 N
ATOM 21 C2 A A1083 35.464 93.475 113.136 1.00 36.42 C
ATOM 22 N3 A A1083 35.405 93.405 114.468 1.00 36.25 N
ATOM 23 C4 A A1083 35.013 94.583 114.983 1.00 35.92 C
ATOM 24 P U A1084 39.564 94.918 118.986 1.00 46.07 P
ATOM 25 OP1 U A1084 40.589 94.318 119.882 1.00 45.78 O
ATOM 26 OP2 U A1084 39.242 96.358 119.102 1.00 43.20 O
ATOM 27 O5' U A1084 39.952 94.605 117.470 1.00 45.66 O
TER

ATOM 1 O3' A B1041 38.044 94.870 103.143 1.00 46.34 O
ATOM 2 P C B1042 38.869 93.940 104.168 1.00 46.40 P
ATOM 3 OP1 C B1042 40.305 94.328 104.133 1.00 47.69 O
ATOM 4 OP2 C B1042 38.489 92.542 103.873 1.00 49.09 O
ATOM 5 O5' C B1042 38.291 94.302 105.607 1.00 44.37 O
ATOM 6 C5' C B1042 38.770 93.597 106.773 1.00 42.59 C
ATOM 7 C4' C B1042 37.807 93.752 107.923 1.00 40.04 C
ATOM 8 O4' C B1042 37.839 95.110 108.434 1.00 36.50 O
ATOM 9 C3' C B1042 36.345 93.499 107.606 1.00 38.55 C
ATOM 10 O3' C B1042 36.075 92.104 107.593 1.00 42.01 O
ATOM 11 C2' C B1042 35.662 94.237 108.748 1.00 39.15 C
ATOM 12 O2' C B1042 35.747 93.524 109.970 1.00 36.66 O
ATOM 13 C1' C B1042 36.539 95.490 108.851 1.00 37.06 C
ATOM 14 N1 C B1042 36.071 96.590 107.977 1.00 36.77 N
ATOM 15 C2 C B1042 34.892 97.267 108.317 1.00 35.47 C
ATOM 16 O2 C B1042 34.277 96.928 109.344 1.00 37.80 O
ATOM 17 N3 C B1042 34.450 98.266 107.518 1.00 32.50 N
ATOM 18 C4 C B1042 35.130 98.593 106.412 1.00 34.39 C
ATOM 19 N4 C B1042 34.649 99.584 105.645 1.00 32.19 N
ATOM 20 C5 C B1042 36.328 97.923 106.042 1.00 33.96 C
ATOM 21 C6 C B1042 36.763 96.940 106.847 1.00 35.74 C
ATOM 22 P C B1043 34.807 91.536 106.784 1.00 43.20 P
ATOM 23 OP1 C B1043 34.847 90.065 106.918 1.00 44.04 O
ATOM 24 OP2 C B1043 34.759 92.145 105.427 1.00 45.82 O
ATOM 25 O5' C B1043 33.558 92.074 107.604 1.00 41.18 O
TER

Atoms:
OP1: (34.986,98.881,118.646)
OP2: (33.428,98.864,120.695)
C3': (37.051,94.504,118.471)
C1': (34.988,94.008,117.466)
C5': (36.134,96.300,119.905)
O4': (34.725,94.774,118.636)
C8: (34.433,96.214,116.330)
O2': (36.334,92.183,118.251)
C6: (34.790,95.674,112.884)
C5: (34.703,95.733,114.280)
C4: (35.013,94.583,114.983)
P: (34.721,98.486,120.054)
C4': (35.940,94.893,119.420)
C2': (36.401,93.436,117.610)
C2: (35.464,93.475,113.136)
N1: (35.187,94.512,112.326)
N3: (35.405,93.405,114.468)
N6: (34.496,96.696,112.088)
N7: (34.344,96.757,115.144)
N9: (34.826,94.894,116.309)
O5': (34.882,96.910,120.187)
O3': (38.201,94.103,119.184)
C2: (34.892,97.267,108.317)
OP1: (40.305,94.328,104.133)
OP2: (38.489,92.542,103.873)
C4: (35.130,98.593,106.412)
O5': (38.291,94.302,105.607)
C3': (36.345,93.499,107.606)
C1': (36.539,95.490,108.851)
O4': (37.839,95.110,108.434)
C5': (38.770,93.597,106.773)
P: (38.869,93.940,104.168)
O2: (34.277,96.928,109.344)
C4': (37.807,93.752,107.923)
C2': (35.662,94.237,108.748)
O2': (35.747,93.524,109.970)
N1: (36.071,96.590,107.977)
N3: (34.450,98.266,107.518)
N4: (34.649,99.584,105.645)
C6: (36.763,96.940,106.847)
C5: (36.328,97.923,106.042)
O3': (36.075,92.104,107.593)
Image (generated by PyMOL):
PyMOL image
show in jmol