ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A251:A252

Extra

PDB:
ATOM 1 O3' G A 250 115.779 53.189 -23.025 1.00 63.71 O
ATOM 2 P U A 251 114.510 53.180 -22.035 1.00 62.38 P
ATOM 3 OP1 U A 251 114.867 52.287 -20.909 1.00 57.11 O
ATOM 4 OP2 U A 251 113.263 52.924 -22.804 1.00 57.11 O
ATOM 5 O5' U A 251 114.484 54.668 -21.478 1.00 62.38 O
ATOM 6 C5' U A 251 115.580 55.144 -20.677 1.00 62.38 C
ATOM 7 C4' U A 251 115.423 56.608 -20.368 1.00 62.38 C
ATOM 8 O4' U A 251 115.660 57.394 -21.557 1.00 62.38 O
ATOM 9 C3' U A 251 114.061 57.053 -19.871 1.00 62.38 C
ATOM 10 O3' U A 251 113.912 56.826 -18.475 1.00 62.38 O
ATOM 11 C2' U A 251 114.059 58.537 -20.209 1.00 62.38 C
ATOM 12 O2' U A 251 114.712 59.310 -19.222 1.00 62.38 O
ATOM 13 C1' U A 251 114.877 58.566 -21.501 1.00 62.38 C
ATOM 14 N1 U A 251 114.058 58.655 -22.718 1.00 57.11 N
ATOM 15 C2 U A 251 113.706 59.914 -23.146 1.00 57.11 C
ATOM 16 O2 U A 251 114.058 60.926 -22.576 1.00 57.11 O
ATOM 17 N3 U A 251 112.932 59.953 -24.272 1.00 57.11 N
ATOM 18 C4 U A 251 112.490 58.889 -25.009 1.00 57.11 C
ATOM 19 O4 U A 251 111.786 59.094 -26.002 1.00 57.11 O
ATOM 20 C5 U A 251 112.903 57.613 -24.514 1.00 57.11 C
ATOM 21 C6 U A 251 113.653 57.542 -23.409 1.00 57.11 C
ATOM 22 P A A 252 112.458 56.489 -17.876 1.00 46.24 P
ATOM 23 OP1 A A 252 112.608 55.966 -16.490 1.00 52.18 O
ATOM 24 OP2 A A 252 111.760 55.688 -18.910 1.00 52.18 O
ATOM 25 O5' A A 252 111.714 57.889 -17.786 1.00 46.24 O
TER

ATOM 1 O3' U B 251 113.912 56.826 -18.475 1.00 62.38 O
ATOM 2 P A B 252 112.458 56.489 -17.876 1.00 46.24 P
ATOM 3 OP1 A B 252 112.608 55.966 -16.490 1.00 52.18 O
ATOM 4 OP2 A B 252 111.760 55.688 -18.910 1.00 52.18 O
ATOM 5 O5' A B 252 111.714 57.889 -17.786 1.00 46.24 O
ATOM 6 C5' A B 252 110.302 57.962 -17.536 1.00 46.24 C
ATOM 7 C4' A B 252 109.844 59.397 -17.621 1.00 46.24 C
ATOM 8 O4' A B 252 110.393 60.145 -16.507 1.00 46.24 O
ATOM 9 C3' A B 252 110.318 60.113 -18.872 1.00 46.24 C
ATOM 10 O3' A B 252 109.381 59.941 -19.922 1.00 46.24 O
ATOM 11 C2' A B 252 110.425 61.564 -18.426 1.00 46.24 C
ATOM 12 O2' A B 252 109.194 62.240 -18.535 1.00 46.24 O
ATOM 13 C1' A B 252 110.812 61.419 -16.947 1.00 46.24 C
ATOM 14 N9 A B 252 112.243 61.533 -16.659 1.00 52.18 N
ATOM 15 C8 A B 252 113.147 60.513 -16.508 1.00 52.18 C
ATOM 16 N7 A B 252 114.354 60.916 -16.207 1.00 52.18 N
ATOM 17 C5 A B 252 114.241 62.294 -16.169 1.00 52.18 C
ATOM 18 C6 A B 252 115.166 63.298 -15.900 1.00 52.18 C
ATOM 19 N6 A B 252 116.441 63.067 -15.605 1.00 52.18 N
ATOM 20 N1 A B 252 114.739 64.571 -15.944 1.00 52.18 N
ATOM 21 C2 A B 252 113.458 64.805 -16.247 1.00 52.18 C
ATOM 22 N3 A B 252 112.490 63.944 -16.521 1.00 52.18 N
ATOM 23 C4 A B 252 112.952 62.688 -16.461 1.00 52.18 C
ATOM 24 P A B 253 109.897 59.902 -21.435 1.00 39.12 P
ATOM 25 OP1 A B 253 108.776 59.719 -22.404 1.00 47.07 O
ATOM 26 OP2 A B 253 111.040 58.966 -21.464 1.00 47.07 O
ATOM 27 O5' A B 253 110.447 61.375 -21.630 1.00 39.12 O
TER

Atoms:
C4: (112.490,58.889,-25.009)
N3: (112.932,59.953,-24.272)
OP1: (114.867,52.287,-20.909)
OP2: (113.263,52.924,-22.804)
C2: (113.706,59.914,-23.146)
C1': (114.877,58.566,-21.501)
C3': (114.061,57.053,-19.871)
O5': (114.484,54.668,-21.478)
O4': (115.660,57.394,-21.557)
C5': (115.580,55.144,-20.677)
P: (114.510,53.180,-22.035)
C4': (115.423,56.608,-20.368)
C2': (114.059,58.537,-20.209)
O2': (114.712,59.310,-19.222)
N1: (114.058,58.655,-22.718)
O4: (111.786,59.094,-26.002)
O2: (114.058,60.926,-22.576)
C6: (113.653,57.542,-23.409)
C5: (112.903,57.613,-24.514)
O3': (113.912,56.826,-18.475)
OP1: (112.608,55.966,-16.490)
OP2: (111.760,55.688,-18.910)
C3': (110.318,60.113,-18.872)
C1': (110.812,61.419,-16.947)
C5': (110.302,57.962,-17.536)
O4': (110.393,60.145,-16.507)
C8: (113.147,60.513,-16.508)
O2': (109.194,62.240,-18.535)
C6: (115.166,63.298,-15.900)
C5: (114.241,62.294,-16.169)
C4: (112.952,62.688,-16.461)
P: (112.458,56.489,-17.876)
C4': (109.844,59.397,-17.621)
C2': (110.425,61.564,-18.426)
C2: (113.458,64.805,-16.247)
N1: (114.739,64.571,-15.944)
N3: (112.490,63.944,-16.521)
N6: (116.441,63.067,-15.605)
N7: (114.354,60.916,-16.207)
N9: (112.243,61.533,-16.659)
O5': (111.714,57.889,-17.786)
O3': (109.381,59.941,-19.922)
Image (generated by PyMOL):
PyMOL image
show in jmol