Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1L3D:A24:A13
Extra
PDB:
ATOM 1 O3' A A 23 32.675 37.426 9.150 1.00 59.66 O
ATOM 2 P A A 24 32.015 37.796 7.724 1.00 62.89 P
ATOM 3 OP1 A A 24 30.771 37.002 7.568 1.00 62.37 O
ATOM 4 OP2 A A 24 33.049 37.783 6.656 1.00 60.74 O
ATOM 5 O5' A A 24 31.533 39.294 7.886 1.00 63.56 O
ATOM 6 C5' A A 24 30.165 39.617 7.655 1.00 63.02 C
ATOM 7 C4' A A 24 29.346 39.233 8.855 1.00 60.82 C
ATOM 8 O4' A A 24 30.048 39.646 10.050 1.00 59.81 O
ATOM 9 C3' A A 24 28.016 39.952 8.904 1.00 59.95 C
ATOM 10 O3' A A 24 27.030 39.224 8.220 1.00 59.48 O
ATOM 11 C2' A A 24 27.734 40.049 10.393 1.00 59.89 C
ATOM 12 O2' A A 24 27.234 38.838 10.905 1.00 60.45 O
ATOM 13 C1' A A 24 29.139 40.246 10.952 1.00 58.87 C
ATOM 14 N9 A A 24 29.534 41.644 11.094 1.00 56.89 N
ATOM 15 C8 A A 24 30.570 42.249 10.435 1.00 57.00 C
ATOM 16 N7 A A 24 30.779 43.489 10.802 1.00 56.72 N
ATOM 17 C5 A A 24 29.800 43.723 11.752 1.00 55.80 C
ATOM 18 C6 A A 24 29.497 44.848 12.529 1.00 55.46 C
ATOM 19 N6 A A 24 30.185 45.991 12.470 1.00 54.79 N
ATOM 20 N1 A A 24 28.457 44.760 13.380 1.00 54.73 N
ATOM 21 C2 A A 24 27.780 43.614 13.440 1.00 55.46 C
ATOM 22 N3 A A 24 27.973 42.480 12.762 1.00 56.00 N
ATOM 23 C4 A A 24 29.011 42.602 11.927 1.00 55.64 C
ATOM 24 P C A 25 25.844 40.010 7.502 1.00 61.31 P
ATOM 25 OP1 C A 25 24.812 39.036 7.067 1.00 62.59 O
ATOM 26 OP2 C A 25 26.480 40.917 6.504 1.00 60.86 O
ATOM 27 O5' C A 25 25.212 40.871 8.672 1.00 58.36 O
TER
ATOM 1 O3' U B 12 24.101 51.877 18.425 0.50 51.97 O
ATOM 2 P C B 13 23.726 51.173 17.033 0.50 51.95 P
ATOM 3 OP1 C B 13 23.030 52.180 16.190 0.50 51.40 O
ATOM 4 OP2 C B 13 23.057 49.872 17.328 0.50 51.66 O
ATOM 5 O5' C B 13 25.144 50.866 16.377 0.50 48.65 O
ATOM 6 C5' C B 13 26.142 50.131 17.102 0.50 45.51 C
ATOM 7 C4' C B 13 26.716 49.057 16.223 0.50 43.62 C
ATOM 8 O4' C B 13 27.223 49.661 15.010 0.50 42.44 O
ATOM 9 C3' C B 13 27.891 48.274 16.781 0.50 42.63 C
ATOM 10 O3' C B 13 27.431 47.200 17.578 0.50 42.04 O
ATOM 11 C2' C B 13 28.562 47.764 15.514 0.50 42.09 C
ATOM 12 O2' C B 13 27.855 46.658 14.996 0.50 43.53 O
ATOM 13 C1' C B 13 28.348 48.934 14.556 0.50 39.98 C
ATOM 14 N1 C B 13 29.486 49.857 14.483 0.50 36.25 N
ATOM 15 C2 C B 13 30.677 49.410 13.912 0.50 35.35 C
ATOM 16 O2 C B 13 30.744 48.241 13.518 0.50 35.27 O
ATOM 17 N3 C B 13 31.719 50.263 13.803 0.50 33.89 N
ATOM 18 C4 C B 13 31.599 51.515 14.245 0.50 33.19 C
ATOM 19 N4 C B 13 32.638 52.329 14.109 0.50 32.31 N
ATOM 20 C5 C B 13 30.397 51.989 14.846 0.50 33.61 C
ATOM 21 C6 C B 13 29.379 51.135 14.948 0.50 34.37 C
ATOM 22 P C B 14 28.317 46.685 18.813 1.00 42.95 P
ATOM 23 OP1 C B 14 27.562 45.568 19.423 1.00 43.64 O
ATOM 24 OP2 C B 14 28.708 47.845 19.636 1.00 43.09 O
ATOM 25 O5' C B 14 29.619 46.097 18.137 1.00 39.23 O
TER
ATOM 2 P A A 24 32.015 37.796 7.724 1.00 62.89 P
ATOM 3 OP1 A A 24 30.771 37.002 7.568 1.00 62.37 O
ATOM 4 OP2 A A 24 33.049 37.783 6.656 1.00 60.74 O
ATOM 5 O5' A A 24 31.533 39.294 7.886 1.00 63.56 O
ATOM 6 C5' A A 24 30.165 39.617 7.655 1.00 63.02 C
ATOM 7 C4' A A 24 29.346 39.233 8.855 1.00 60.82 C
ATOM 8 O4' A A 24 30.048 39.646 10.050 1.00 59.81 O
ATOM 9 C3' A A 24 28.016 39.952 8.904 1.00 59.95 C
ATOM 10 O3' A A 24 27.030 39.224 8.220 1.00 59.48 O
ATOM 11 C2' A A 24 27.734 40.049 10.393 1.00 59.89 C
ATOM 12 O2' A A 24 27.234 38.838 10.905 1.00 60.45 O
ATOM 13 C1' A A 24 29.139 40.246 10.952 1.00 58.87 C
ATOM 14 N9 A A 24 29.534 41.644 11.094 1.00 56.89 N
ATOM 15 C8 A A 24 30.570 42.249 10.435 1.00 57.00 C
ATOM 16 N7 A A 24 30.779 43.489 10.802 1.00 56.72 N
ATOM 17 C5 A A 24 29.800 43.723 11.752 1.00 55.80 C
ATOM 18 C6 A A 24 29.497 44.848 12.529 1.00 55.46 C
ATOM 19 N6 A A 24 30.185 45.991 12.470 1.00 54.79 N
ATOM 20 N1 A A 24 28.457 44.760 13.380 1.00 54.73 N
ATOM 21 C2 A A 24 27.780 43.614 13.440 1.00 55.46 C
ATOM 22 N3 A A 24 27.973 42.480 12.762 1.00 56.00 N
ATOM 23 C4 A A 24 29.011 42.602 11.927 1.00 55.64 C
ATOM 24 P C A 25 25.844 40.010 7.502 1.00 61.31 P
ATOM 25 OP1 C A 25 24.812 39.036 7.067 1.00 62.59 O
ATOM 26 OP2 C A 25 26.480 40.917 6.504 1.00 60.86 O
ATOM 27 O5' C A 25 25.212 40.871 8.672 1.00 58.36 O
TER
ATOM 1 O3' U B 12 24.101 51.877 18.425 0.50 51.97 O
ATOM 2 P C B 13 23.726 51.173 17.033 0.50 51.95 P
ATOM 3 OP1 C B 13 23.030 52.180 16.190 0.50 51.40 O
ATOM 4 OP2 C B 13 23.057 49.872 17.328 0.50 51.66 O
ATOM 5 O5' C B 13 25.144 50.866 16.377 0.50 48.65 O
ATOM 6 C5' C B 13 26.142 50.131 17.102 0.50 45.51 C
ATOM 7 C4' C B 13 26.716 49.057 16.223 0.50 43.62 C
ATOM 8 O4' C B 13 27.223 49.661 15.010 0.50 42.44 O
ATOM 9 C3' C B 13 27.891 48.274 16.781 0.50 42.63 C
ATOM 10 O3' C B 13 27.431 47.200 17.578 0.50 42.04 O
ATOM 11 C2' C B 13 28.562 47.764 15.514 0.50 42.09 C
ATOM 12 O2' C B 13 27.855 46.658 14.996 0.50 43.53 O
ATOM 13 C1' C B 13 28.348 48.934 14.556 0.50 39.98 C
ATOM 14 N1 C B 13 29.486 49.857 14.483 0.50 36.25 N
ATOM 15 C2 C B 13 30.677 49.410 13.912 0.50 35.35 C
ATOM 16 O2 C B 13 30.744 48.241 13.518 0.50 35.27 O
ATOM 17 N3 C B 13 31.719 50.263 13.803 0.50 33.89 N
ATOM 18 C4 C B 13 31.599 51.515 14.245 0.50 33.19 C
ATOM 19 N4 C B 13 32.638 52.329 14.109 0.50 32.31 N
ATOM 20 C5 C B 13 30.397 51.989 14.846 0.50 33.61 C
ATOM 21 C6 C B 13 29.379 51.135 14.948 0.50 34.37 C
ATOM 22 P C B 14 28.317 46.685 18.813 1.00 42.95 P
ATOM 23 OP1 C B 14 27.562 45.568 19.423 1.00 43.64 O
ATOM 24 OP2 C B 14 28.708 47.845 19.636 1.00 43.09 O
ATOM 25 O5' C B 14 29.619 46.097 18.137 1.00 39.23 O
TER
Atoms:
OP1: (30.771,37.002,7.568)
OP2: (33.049,37.783,6.656)
C3': (28.016,39.952,8.904)
C1': (29.139,40.246,10.952)
C5': (30.165,39.617,7.655)
O4': (30.048,39.646,10.050)
C8: (30.570,42.249,10.435)
O2': (27.234,38.838,10.905)
C6: (29.497,44.848,12.529)
C5: (29.800,43.723,11.752)
C4: (29.011,42.602,11.927)
P: (32.015,37.796,7.724)
C4': (29.346,39.233,8.855)
C2': (27.734,40.049,10.393)
C2: (27.780,43.614,13.440)
N1: (28.457,44.760,13.380)
N3: (27.973,42.480,12.762)
N6: (30.185,45.991,12.470)
N7: (30.779,43.489,10.802)
N9: (29.534,41.644,11.094)
O5': (31.533,39.294,7.886)
O3': (27.030,39.224,8.220)
OP2: (33.049,37.783,6.656)
C3': (28.016,39.952,8.904)
C1': (29.139,40.246,10.952)
C5': (30.165,39.617,7.655)
O4': (30.048,39.646,10.050)
C8: (30.570,42.249,10.435)
O2': (27.234,38.838,10.905)
C6: (29.497,44.848,12.529)
C5: (29.800,43.723,11.752)
C4: (29.011,42.602,11.927)
P: (32.015,37.796,7.724)
C4': (29.346,39.233,8.855)
C2': (27.734,40.049,10.393)
C2: (27.780,43.614,13.440)
N1: (28.457,44.760,13.380)
N3: (27.973,42.480,12.762)
N6: (30.185,45.991,12.470)
N7: (30.779,43.489,10.802)
N9: (29.534,41.644,11.094)
O5': (31.533,39.294,7.886)
O3': (27.030,39.224,8.220)
C2: (30.677,49.410,13.912)
OP1: (23.030,52.180,16.190)
OP2: (23.057,49.872,17.328)
C4: (31.599,51.515,14.245)
O5': (25.144,50.866,16.377)
C3': (27.891,48.274,16.781)
C1': (28.348,48.934,14.556)
O4': (27.223,49.661,15.010)
C5': (26.142,50.131,17.102)
P: (23.726,51.173,17.033)
O2: (30.744,48.241,13.518)
C4': (26.716,49.057,16.223)
C2': (28.562,47.764,15.514)
O2': (27.855,46.658,14.996)
N1: (29.486,49.857,14.483)
N3: (31.719,50.263,13.803)
N4: (32.638,52.329,14.109)
C6: (29.379,51.135,14.948)
C5: (30.397,51.989,14.846)
O3': (27.431,47.200,17.578)
OP1: (23.030,52.180,16.190)
OP2: (23.057,49.872,17.328)
C4: (31.599,51.515,14.245)
O5': (25.144,50.866,16.377)
C3': (27.891,48.274,16.781)
C1': (28.348,48.934,14.556)
O4': (27.223,49.661,15.010)
C5': (26.142,50.131,17.102)
P: (23.726,51.173,17.033)
O2: (30.744,48.241,13.518)
C4': (26.716,49.057,16.223)
C2': (28.562,47.764,15.514)
O2': (27.855,46.658,14.996)
N1: (29.486,49.857,14.483)
N3: (31.719,50.263,13.803)
N4: (32.638,52.329,14.109)
C6: (29.379,51.135,14.948)
C5: (30.397,51.989,14.846)
O3': (27.431,47.200,17.578)
Image (generated by PyMOL):