Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0482:0483
Extra
PDB:
ATOM 1 O3' U A 481 25.039 177.675 76.793 1.00 59.21 O
ATOM 2 P C A 482 26.270 178.692 76.958 1.00 61.42 P
ATOM 3 OP1 C A 482 26.322 179.063 78.394 1.00 60.63 O
ATOM 4 OP2 C A 482 26.153 179.757 75.923 1.00 61.40 O
ATOM 5 O5' C A 482 27.556 177.819 76.606 1.00 61.31 O
ATOM 6 C5' C A 482 27.975 176.744 77.459 1.00 60.95 C
ATOM 7 C4' C A 482 29.103 175.980 76.817 1.00 62.08 C
ATOM 8 O4' C A 482 28.628 175.316 75.617 1.00 62.34 O
ATOM 9 C3' C A 482 30.273 176.817 76.325 1.00 62.93 C
ATOM 10 O3' C A 482 31.159 177.166 77.386 1.00 63.13 O
ATOM 11 C2' C A 482 30.924 175.893 75.301 1.00 62.79 C
ATOM 12 O2' C A 482 31.756 174.910 75.881 1.00 64.86 O
ATOM 13 C1' C A 482 29.698 175.208 74.688 1.00 62.13 C
ATOM 14 N1 C A 482 29.281 175.780 73.395 1.00 61.23 N
ATOM 15 C2 C A 482 29.597 175.083 72.225 1.00 61.51 C
ATOM 16 O2 C A 482 30.216 174.014 72.306 1.00 61.71 O
ATOM 17 N3 C A 482 29.224 175.591 71.033 1.00 62.35 N
ATOM 18 C4 C A 482 28.562 176.746 70.978 1.00 61.43 C
ATOM 19 N4 C A 482 28.217 177.205 69.772 1.00 60.78 N
ATOM 20 C5 C A 482 28.228 177.480 72.152 1.00 60.24 C
ATOM 21 C6 C A 482 28.602 176.965 73.329 1.00 60.30 C
ATOM 22 P A A 483 31.825 178.628 77.421 1.00 63.03 P
ATOM 23 OP1 A A 483 32.549 178.801 78.702 1.00 62.28 O
ATOM 24 OP2 A A 483 30.773 179.603 77.037 1.00 64.57 O
ATOM 25 O5' A A 483 32.907 178.592 76.259 1.00 60.43 O
TER
ATOM 1 O3' C B 482 31.159 177.166 77.386 1.00 63.13 O
ATOM 2 P A B 483 31.825 178.628 77.421 1.00 63.03 P
ATOM 3 OP1 A B 483 32.549 178.801 78.702 1.00 62.28 O
ATOM 4 OP2 A B 483 30.773 179.603 77.037 1.00 64.57 O
ATOM 5 O5' A B 483 32.907 178.592 76.259 1.00 60.43 O
ATOM 6 C5' A B 483 33.614 179.780 75.888 1.00 60.43 C
ATOM 7 C4' A B 483 34.725 179.436 74.938 1.00 61.06 C
ATOM 8 O4' A B 483 35.732 178.664 75.631 1.00 60.75 O
ATOM 9 C3' A B 483 34.304 178.551 73.782 1.00 62.53 C
ATOM 10 O3' A B 483 33.730 179.345 72.754 1.00 65.50 O
ATOM 11 C2' A B 483 35.612 177.880 73.378 1.00 61.58 C
ATOM 12 O2' A B 483 36.421 178.672 72.534 1.00 61.87 O
ATOM 13 C1' A B 483 36.304 177.728 74.737 1.00 61.38 C
ATOM 14 N9 A B 483 36.214 176.404 75.346 1.00 60.85 N
ATOM 15 C8 A B 483 35.418 176.007 76.388 1.00 60.87 C
ATOM 16 N7 A B 483 35.608 174.764 76.753 1.00 62.31 N
ATOM 17 C5 A B 483 36.590 174.308 75.883 1.00 60.90 C
ATOM 18 C6 A B 483 37.238 173.066 75.752 1.00 60.95 C
ATOM 19 N6 A B 483 36.996 172.013 76.541 1.00 58.66 N
ATOM 20 N1 A B 483 38.158 172.941 74.771 1.00 60.99 N
ATOM 21 C2 A B 483 38.404 173.995 73.986 1.00 61.06 C
ATOM 22 N3 A B 483 37.865 175.211 74.014 1.00 61.18 N
ATOM 23 C4 A B 483 36.957 175.303 74.999 1.00 60.99 C
ATOM 24 P G B 484 32.363 178.882 72.051 1.00 67.37 P
ATOM 25 OP1 G B 484 31.758 180.083 71.420 1.00 68.19 O
ATOM 26 OP2 G B 484 31.574 178.096 73.037 1.00 66.76 O
ATOM 27 O5' G B 484 32.858 177.906 70.895 1.00 67.69 O
TER
ATOM 2 P C A 482 26.270 178.692 76.958 1.00 61.42 P
ATOM 3 OP1 C A 482 26.322 179.063 78.394 1.00 60.63 O
ATOM 4 OP2 C A 482 26.153 179.757 75.923 1.00 61.40 O
ATOM 5 O5' C A 482 27.556 177.819 76.606 1.00 61.31 O
ATOM 6 C5' C A 482 27.975 176.744 77.459 1.00 60.95 C
ATOM 7 C4' C A 482 29.103 175.980 76.817 1.00 62.08 C
ATOM 8 O4' C A 482 28.628 175.316 75.617 1.00 62.34 O
ATOM 9 C3' C A 482 30.273 176.817 76.325 1.00 62.93 C
ATOM 10 O3' C A 482 31.159 177.166 77.386 1.00 63.13 O
ATOM 11 C2' C A 482 30.924 175.893 75.301 1.00 62.79 C
ATOM 12 O2' C A 482 31.756 174.910 75.881 1.00 64.86 O
ATOM 13 C1' C A 482 29.698 175.208 74.688 1.00 62.13 C
ATOM 14 N1 C A 482 29.281 175.780 73.395 1.00 61.23 N
ATOM 15 C2 C A 482 29.597 175.083 72.225 1.00 61.51 C
ATOM 16 O2 C A 482 30.216 174.014 72.306 1.00 61.71 O
ATOM 17 N3 C A 482 29.224 175.591 71.033 1.00 62.35 N
ATOM 18 C4 C A 482 28.562 176.746 70.978 1.00 61.43 C
ATOM 19 N4 C A 482 28.217 177.205 69.772 1.00 60.78 N
ATOM 20 C5 C A 482 28.228 177.480 72.152 1.00 60.24 C
ATOM 21 C6 C A 482 28.602 176.965 73.329 1.00 60.30 C
ATOM 22 P A A 483 31.825 178.628 77.421 1.00 63.03 P
ATOM 23 OP1 A A 483 32.549 178.801 78.702 1.00 62.28 O
ATOM 24 OP2 A A 483 30.773 179.603 77.037 1.00 64.57 O
ATOM 25 O5' A A 483 32.907 178.592 76.259 1.00 60.43 O
TER
ATOM 1 O3' C B 482 31.159 177.166 77.386 1.00 63.13 O
ATOM 2 P A B 483 31.825 178.628 77.421 1.00 63.03 P
ATOM 3 OP1 A B 483 32.549 178.801 78.702 1.00 62.28 O
ATOM 4 OP2 A B 483 30.773 179.603 77.037 1.00 64.57 O
ATOM 5 O5' A B 483 32.907 178.592 76.259 1.00 60.43 O
ATOM 6 C5' A B 483 33.614 179.780 75.888 1.00 60.43 C
ATOM 7 C4' A B 483 34.725 179.436 74.938 1.00 61.06 C
ATOM 8 O4' A B 483 35.732 178.664 75.631 1.00 60.75 O
ATOM 9 C3' A B 483 34.304 178.551 73.782 1.00 62.53 C
ATOM 10 O3' A B 483 33.730 179.345 72.754 1.00 65.50 O
ATOM 11 C2' A B 483 35.612 177.880 73.378 1.00 61.58 C
ATOM 12 O2' A B 483 36.421 178.672 72.534 1.00 61.87 O
ATOM 13 C1' A B 483 36.304 177.728 74.737 1.00 61.38 C
ATOM 14 N9 A B 483 36.214 176.404 75.346 1.00 60.85 N
ATOM 15 C8 A B 483 35.418 176.007 76.388 1.00 60.87 C
ATOM 16 N7 A B 483 35.608 174.764 76.753 1.00 62.31 N
ATOM 17 C5 A B 483 36.590 174.308 75.883 1.00 60.90 C
ATOM 18 C6 A B 483 37.238 173.066 75.752 1.00 60.95 C
ATOM 19 N6 A B 483 36.996 172.013 76.541 1.00 58.66 N
ATOM 20 N1 A B 483 38.158 172.941 74.771 1.00 60.99 N
ATOM 21 C2 A B 483 38.404 173.995 73.986 1.00 61.06 C
ATOM 22 N3 A B 483 37.865 175.211 74.014 1.00 61.18 N
ATOM 23 C4 A B 483 36.957 175.303 74.999 1.00 60.99 C
ATOM 24 P G B 484 32.363 178.882 72.051 1.00 67.37 P
ATOM 25 OP1 G B 484 31.758 180.083 71.420 1.00 68.19 O
ATOM 26 OP2 G B 484 31.574 178.096 73.037 1.00 66.76 O
ATOM 27 O5' G B 484 32.858 177.906 70.895 1.00 67.69 O
TER
Atoms:
C2: (29.597,175.083,72.225)
OP1: (26.322,179.063,78.394)
OP2: (26.153,179.757,75.923)
C4: (28.562,176.746,70.978)
O5': (27.556,177.819,76.606)
C3': (30.273,176.817,76.325)
C1': (29.698,175.208,74.688)
O4': (28.628,175.316,75.617)
C5': (27.975,176.744,77.459)
P: (26.270,178.692,76.958)
O2: (30.216,174.014,72.306)
C4': (29.103,175.980,76.817)
C2': (30.924,175.893,75.301)
O2': (31.756,174.910,75.881)
N1: (29.281,175.780,73.395)
N3: (29.224,175.591,71.033)
N4: (28.217,177.205,69.772)
C6: (28.602,176.965,73.329)
C5: (28.228,177.480,72.152)
O3': (31.159,177.166,77.386)
OP1: (26.322,179.063,78.394)
OP2: (26.153,179.757,75.923)
C4: (28.562,176.746,70.978)
O5': (27.556,177.819,76.606)
C3': (30.273,176.817,76.325)
C1': (29.698,175.208,74.688)
O4': (28.628,175.316,75.617)
C5': (27.975,176.744,77.459)
P: (26.270,178.692,76.958)
O2: (30.216,174.014,72.306)
C4': (29.103,175.980,76.817)
C2': (30.924,175.893,75.301)
O2': (31.756,174.910,75.881)
N1: (29.281,175.780,73.395)
N3: (29.224,175.591,71.033)
N4: (28.217,177.205,69.772)
C6: (28.602,176.965,73.329)
C5: (28.228,177.480,72.152)
O3': (31.159,177.166,77.386)
OP1: (32.549,178.801,78.702)
OP2: (30.773,179.603,77.037)
C3': (34.304,178.551,73.782)
C1': (36.304,177.728,74.737)
C5': (33.614,179.780,75.888)
O4': (35.732,178.664,75.631)
C8: (35.418,176.007,76.388)
O2': (36.421,178.672,72.534)
C6: (37.238,173.066,75.752)
C5: (36.590,174.308,75.883)
C4: (36.957,175.303,74.999)
P: (31.825,178.628,77.421)
C4': (34.725,179.436,74.938)
C2': (35.612,177.880,73.378)
C2: (38.404,173.995,73.986)
N1: (38.158,172.941,74.771)
N3: (37.865,175.211,74.014)
N6: (36.996,172.013,76.541)
N7: (35.608,174.764,76.753)
N9: (36.214,176.404,75.346)
O5': (32.907,178.592,76.259)
O3': (33.730,179.345,72.754)
OP2: (30.773,179.603,77.037)
C3': (34.304,178.551,73.782)
C1': (36.304,177.728,74.737)
C5': (33.614,179.780,75.888)
O4': (35.732,178.664,75.631)
C8: (35.418,176.007,76.388)
O2': (36.421,178.672,72.534)
C6: (37.238,173.066,75.752)
C5: (36.590,174.308,75.883)
C4: (36.957,175.303,74.999)
P: (31.825,178.628,77.421)
C4': (34.725,179.436,74.938)
C2': (35.612,177.880,73.378)
C2: (38.404,173.995,73.986)
N1: (38.158,172.941,74.771)
N3: (37.865,175.211,74.014)
N6: (36.996,172.013,76.541)
N7: (35.608,174.764,76.753)
N9: (36.214,176.404,75.346)
O5': (32.907,178.592,76.259)
O3': (33.730,179.345,72.754)
Image (generated by PyMOL):