Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A16:A554
Extra
PDB:
ATOM 1 O3' C A 15 -57.103 -96.495 -1.546 1.00 0.01 O
ATOM 2 P G A 16 -56.847 -97.332 -0.203 1.00 0.01 P
ATOM 3 OP1 G A 16 -56.752 -96.389 0.912 1.00 0.01 O
ATOM 4 OP2 G A 16 -55.733 -98.231 -0.448 1.00 0.01 O
ATOM 5 O5' G A 16 -58.178 -98.147 -0.072 1.00 0.01 O
ATOM 6 C5' G A 16 -59.428 -97.504 -0.250 1.00 0.01 C
ATOM 7 C4' G A 16 -60.541 -98.500 -0.267 1.00 0.01 C
ATOM 8 O4' G A 16 -60.407 -99.337 -1.428 1.00 0.01 O
ATOM 9 C3' G A 16 -60.539 -99.454 0.883 1.00 0.01 C
ATOM 10 O3' G A 16 -61.209 -98.936 1.988 1.00 0.01 O
ATOM 11 C2' G A 16 -61.161-100.713 0.302 1.00 0.01 C
ATOM 12 O2' G A 16 -62.571-100.644 0.270 1.00 0.01 O
ATOM 13 C1' G A 16 -60.667-100.663 -1.111 1.00 0.01 C
ATOM 14 N9 G A 16 -59.441-101.391 -1.283 1.00 0.01 N
ATOM 15 C8 G A 16 -58.233-100.838 -1.392 1.00 0.01 C
ATOM 16 N7 G A 16 -57.332-101.734 -1.602 1.00 0.01 N
ATOM 17 C5 G A 16 -58.018-102.927 -1.630 1.00 0.01 C
ATOM 18 C6 G A 16 -57.589-104.245 -1.811 1.00 0.01 C
ATOM 19 O6 G A 16 -56.451-104.671 -2.005 1.00 0.01 O
ATOM 20 N1 G A 16 -58.651-105.115 -1.768 1.00 0.01 N
ATOM 21 C2 G A 16 -59.944-104.769 -1.584 1.00 0.01 C
ATOM 22 N2 G A 16 -60.856-105.729 -1.569 1.00 0.01 N
ATOM 23 N3 G A 16 -60.338-103.558 -1.430 1.00 0.01 N
ATOM 24 C4 G A 16 -59.330-102.709 -1.461 1.00 0.01 C
ATOM 25 P U A 17 -60.637 -99.183 3.436 1.00 0.01 P
ATOM 26 OP1 U A 17 -61.294 -98.232 4.301 1.00 0.01 O
ATOM 27 OP2 U A 17 -59.176 -99.165 3.363 1.00 0.01 O
ATOM 28 O5' U A 17 -61.137-100.648 3.747 1.00 0.01 O
TER
ATOM 1 O3' U B 553 -63.725-106.927 0.252 1.00 0.01 O
ATOM 2 P G B 554 -64.845-105.979 -0.341 1.00 0.01 P
ATOM 3 OP1 G B 554 -64.167-104.946 -1.134 1.00 0.01 O
ATOM 4 OP2 G B 554 -65.698-105.576 0.759 1.00 0.01 O
ATOM 5 O5' G B 554 -65.632-106.933 -1.291 1.00 0.01 O
ATOM 6 C5' G B 554 -65.221-107.124 -2.627 1.00 0.01 C
ATOM 7 C4' G B 554 -66.312-107.752 -3.444 1.00 0.01 C
ATOM 8 O4' G B 554 -66.705-109.016 -2.828 1.00 0.01 O
ATOM 9 C3' G B 554 -67.580-106.908 -3.569 1.00 0.01 C
ATOM 10 O3' G B 554 -68.058-106.927 -4.889 1.00 0.01 O
ATOM 11 C2' G B 554 -68.577-107.609 -2.690 1.00 0.01 C
ATOM 12 O2' G B 554 -69.890-107.510 -3.140 1.00 0.01 O
ATOM 13 C1' G B 554 -68.104-109.060 -2.689 1.00 0.01 C
ATOM 14 N9 G B 554 -68.431-109.695 -1.434 1.00 0.01 N
ATOM 15 C8 G B 554 -68.026-109.008 -0.333 1.00 0.01 C
ATOM 16 N7 G B 554 -68.452-109.511 0.755 1.00 0.01 N
ATOM 17 C5 G B 554 -69.226-110.578 0.333 1.00 0.01 C
ATOM 18 C6 G B 554 -69.926-111.464 1.138 1.00 0.01 C
ATOM 19 O6 G B 554 -69.989-111.470 2.358 1.00 0.01 O
ATOM 20 N1 G B 554 -70.587-112.410 0.422 1.00 0.01 N
ATOM 21 C2 G B 554 -70.593-112.487 -0.919 1.00 0.01 C
ATOM 22 N2 G B 554 -71.344-113.527 -1.338 1.00 0.01 N
ATOM 23 N3 G B 554 -69.949-111.637 -1.719 1.00 0.01 N
ATOM 24 C4 G B 554 -69.277-110.702 -1.022 1.00 0.01 C
ATOM 25 P A B 555 -68.950-105.734 -5.426 1.00 0.01 P
ATOM 26 OP1 A B 555 -68.233-104.495 -5.176 1.00 0.01 O
ATOM 27 OP2 A B 555 -70.274-105.897 -4.855 1.00 0.01 O
ATOM 28 O5' A B 555 -68.989-106.016 -6.980 1.00 0.01 O
TER
ATOM 2 P G A 16 -56.847 -97.332 -0.203 1.00 0.01 P
ATOM 3 OP1 G A 16 -56.752 -96.389 0.912 1.00 0.01 O
ATOM 4 OP2 G A 16 -55.733 -98.231 -0.448 1.00 0.01 O
ATOM 5 O5' G A 16 -58.178 -98.147 -0.072 1.00 0.01 O
ATOM 6 C5' G A 16 -59.428 -97.504 -0.250 1.00 0.01 C
ATOM 7 C4' G A 16 -60.541 -98.500 -0.267 1.00 0.01 C
ATOM 8 O4' G A 16 -60.407 -99.337 -1.428 1.00 0.01 O
ATOM 9 C3' G A 16 -60.539 -99.454 0.883 1.00 0.01 C
ATOM 10 O3' G A 16 -61.209 -98.936 1.988 1.00 0.01 O
ATOM 11 C2' G A 16 -61.161-100.713 0.302 1.00 0.01 C
ATOM 12 O2' G A 16 -62.571-100.644 0.270 1.00 0.01 O
ATOM 13 C1' G A 16 -60.667-100.663 -1.111 1.00 0.01 C
ATOM 14 N9 G A 16 -59.441-101.391 -1.283 1.00 0.01 N
ATOM 15 C8 G A 16 -58.233-100.838 -1.392 1.00 0.01 C
ATOM 16 N7 G A 16 -57.332-101.734 -1.602 1.00 0.01 N
ATOM 17 C5 G A 16 -58.018-102.927 -1.630 1.00 0.01 C
ATOM 18 C6 G A 16 -57.589-104.245 -1.811 1.00 0.01 C
ATOM 19 O6 G A 16 -56.451-104.671 -2.005 1.00 0.01 O
ATOM 20 N1 G A 16 -58.651-105.115 -1.768 1.00 0.01 N
ATOM 21 C2 G A 16 -59.944-104.769 -1.584 1.00 0.01 C
ATOM 22 N2 G A 16 -60.856-105.729 -1.569 1.00 0.01 N
ATOM 23 N3 G A 16 -60.338-103.558 -1.430 1.00 0.01 N
ATOM 24 C4 G A 16 -59.330-102.709 -1.461 1.00 0.01 C
ATOM 25 P U A 17 -60.637 -99.183 3.436 1.00 0.01 P
ATOM 26 OP1 U A 17 -61.294 -98.232 4.301 1.00 0.01 O
ATOM 27 OP2 U A 17 -59.176 -99.165 3.363 1.00 0.01 O
ATOM 28 O5' U A 17 -61.137-100.648 3.747 1.00 0.01 O
TER
ATOM 1 O3' U B 553 -63.725-106.927 0.252 1.00 0.01 O
ATOM 2 P G B 554 -64.845-105.979 -0.341 1.00 0.01 P
ATOM 3 OP1 G B 554 -64.167-104.946 -1.134 1.00 0.01 O
ATOM 4 OP2 G B 554 -65.698-105.576 0.759 1.00 0.01 O
ATOM 5 O5' G B 554 -65.632-106.933 -1.291 1.00 0.01 O
ATOM 6 C5' G B 554 -65.221-107.124 -2.627 1.00 0.01 C
ATOM 7 C4' G B 554 -66.312-107.752 -3.444 1.00 0.01 C
ATOM 8 O4' G B 554 -66.705-109.016 -2.828 1.00 0.01 O
ATOM 9 C3' G B 554 -67.580-106.908 -3.569 1.00 0.01 C
ATOM 10 O3' G B 554 -68.058-106.927 -4.889 1.00 0.01 O
ATOM 11 C2' G B 554 -68.577-107.609 -2.690 1.00 0.01 C
ATOM 12 O2' G B 554 -69.890-107.510 -3.140 1.00 0.01 O
ATOM 13 C1' G B 554 -68.104-109.060 -2.689 1.00 0.01 C
ATOM 14 N9 G B 554 -68.431-109.695 -1.434 1.00 0.01 N
ATOM 15 C8 G B 554 -68.026-109.008 -0.333 1.00 0.01 C
ATOM 16 N7 G B 554 -68.452-109.511 0.755 1.00 0.01 N
ATOM 17 C5 G B 554 -69.226-110.578 0.333 1.00 0.01 C
ATOM 18 C6 G B 554 -69.926-111.464 1.138 1.00 0.01 C
ATOM 19 O6 G B 554 -69.989-111.470 2.358 1.00 0.01 O
ATOM 20 N1 G B 554 -70.587-112.410 0.422 1.00 0.01 N
ATOM 21 C2 G B 554 -70.593-112.487 -0.919 1.00 0.01 C
ATOM 22 N2 G B 554 -71.344-113.527 -1.338 1.00 0.01 N
ATOM 23 N3 G B 554 -69.949-111.637 -1.719 1.00 0.01 N
ATOM 24 C4 G B 554 -69.277-110.702 -1.022 1.00 0.01 C
ATOM 25 P A B 555 -68.950-105.734 -5.426 1.00 0.01 P
ATOM 26 OP1 A B 555 -68.233-104.495 -5.176 1.00 0.01 O
ATOM 27 OP2 A B 555 -70.274-105.897 -4.855 1.00 0.01 O
ATOM 28 O5' A B 555 -68.989-106.016 -6.980 1.00 0.01 O
TER
Atoms:
OP1: (-56.752,-96.389,0.912)
OP2: (-55.733,-98.231,-0.448)
C3': (-60.539,-99.454,0.883)
C1': (-60.667,-100.663,-1.111)
C5': (-59.428,-97.504,-0.250)
O6: (-56.451,-104.671,-2.005)
O4': (-60.407,-99.337,-1.428)
C8: (-58.233,-100.838,-1.392)
C2: (-59.944,-104.769,-1.584)
C6: (-57.589,-104.245,-1.811)
C5: (-58.018,-102.927,-1.630)
C4: (-59.330,-102.709,-1.461)
P: (-56.847,-97.332,-0.203)
C4': (-60.541,-98.500,-0.267)
C2': (-61.161,-100.713,0.302)
O2': (-62.571,-100.644,0.270)
N1: (-58.651,-105.115,-1.768)
N2: (-60.856,-105.729,-1.569)
N3: (-60.338,-103.558,-1.430)
N7: (-57.332,-101.734,-1.602)
N9: (-59.441,-101.391,-1.283)
O5': (-58.178,-98.147,-0.072)
O3': (-61.209,-98.936,1.988)
OP2: (-55.733,-98.231,-0.448)
C3': (-60.539,-99.454,0.883)
C1': (-60.667,-100.663,-1.111)
C5': (-59.428,-97.504,-0.250)
O6: (-56.451,-104.671,-2.005)
O4': (-60.407,-99.337,-1.428)
C8: (-58.233,-100.838,-1.392)
C2: (-59.944,-104.769,-1.584)
C6: (-57.589,-104.245,-1.811)
C5: (-58.018,-102.927,-1.630)
C4: (-59.330,-102.709,-1.461)
P: (-56.847,-97.332,-0.203)
C4': (-60.541,-98.500,-0.267)
C2': (-61.161,-100.713,0.302)
O2': (-62.571,-100.644,0.270)
N1: (-58.651,-105.115,-1.768)
N2: (-60.856,-105.729,-1.569)
N3: (-60.338,-103.558,-1.430)
N7: (-57.332,-101.734,-1.602)
N9: (-59.441,-101.391,-1.283)
O5': (-58.178,-98.147,-0.072)
O3': (-61.209,-98.936,1.988)
OP1: (-64.167,-104.946,-1.134)
OP2: (-65.698,-105.576,0.759)
C3': (-67.580,-106.908,-3.569)
C1': (-68.104,-109.060,-2.689)
C5': (-65.221,-107.124,-2.627)
O6: (-69.989,-111.470,2.358)
O4': (-66.705,-109.016,-2.828)
C8: (-68.026,-109.008,-0.333)
C2: (-70.593,-112.487,-0.919)
C6: (-69.926,-111.464,1.138)
C5: (-69.226,-110.578,0.333)
C4: (-69.277,-110.702,-1.022)
P: (-64.845,-105.979,-0.341)
C4': (-66.312,-107.752,-3.444)
C2': (-68.577,-107.609,-2.690)
O2': (-69.890,-107.510,-3.140)
N1: (-70.587,-112.410,0.422)
N2: (-71.344,-113.527,-1.338)
N3: (-69.949,-111.637,-1.719)
N7: (-68.452,-109.511,0.755)
N9: (-68.431,-109.695,-1.434)
O5': (-65.632,-106.933,-1.291)
O3': (-68.058,-106.927,-4.889)
OP2: (-65.698,-105.576,0.759)
C3': (-67.580,-106.908,-3.569)
C1': (-68.104,-109.060,-2.689)
C5': (-65.221,-107.124,-2.627)
O6: (-69.989,-111.470,2.358)
O4': (-66.705,-109.016,-2.828)
C8: (-68.026,-109.008,-0.333)
C2: (-70.593,-112.487,-0.919)
C6: (-69.926,-111.464,1.138)
C5: (-69.226,-110.578,0.333)
C4: (-69.277,-110.702,-1.022)
P: (-64.845,-105.979,-0.341)
C4': (-66.312,-107.752,-3.444)
C2': (-68.577,-107.609,-2.690)
O2': (-69.890,-107.510,-3.140)
N1: (-70.587,-112.410,0.422)
N2: (-71.344,-113.527,-1.338)
N3: (-69.949,-111.637,-1.719)
N7: (-68.452,-109.511,0.755)
N9: (-68.431,-109.695,-1.434)
O5': (-65.632,-106.933,-1.291)
O3': (-68.058,-106.927,-4.889)
Image (generated by PyMOL):