Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0482:0483
Extra
PDB:
ATOM 1 O3' U A 481 24.951 177.750 76.774 1.00 53.92 O
ATOM 2 P C A 482 26.157 178.794 76.948 1.00 56.23 P
ATOM 3 OP1 C A 482 26.190 179.169 78.385 1.00 55.54 O
ATOM 4 OP2 C A 482 26.021 179.850 75.910 1.00 56.61 O
ATOM 5 O5' C A 482 27.464 177.949 76.608 1.00 56.33 O
ATOM 6 C5' C A 482 27.862 176.843 77.432 1.00 55.37 C
ATOM 7 C4' C A 482 28.983 176.082 76.775 1.00 55.89 C
ATOM 8 O4' C A 482 28.509 175.437 75.565 1.00 55.35 O
ATOM 9 C3' C A 482 30.159 176.918 76.299 1.00 56.89 C
ATOM 10 O3' C A 482 31.028 177.252 77.380 1.00 57.85 O
ATOM 11 C2' C A 482 30.812 175.993 75.273 1.00 56.88 C
ATOM 12 O2' C A 482 31.637 174.997 75.844 1.00 58.92 O
ATOM 13 C1' C A 482 29.586 175.319 74.647 1.00 55.22 C
ATOM 14 N1 C A 482 29.186 175.898 73.354 1.00 53.45 N
ATOM 15 C2 C A 482 29.525 175.214 72.176 1.00 53.87 C
ATOM 16 O2 C A 482 30.146 174.142 72.255 1.00 53.41 O
ATOM 17 N3 C A 482 29.167 175.739 70.984 1.00 53.48 N
ATOM 18 C4 C A 482 28.496 176.891 70.936 1.00 52.10 C
ATOM 19 N4 C A 482 28.156 177.364 69.734 1.00 51.06 N
ATOM 20 C5 C A 482 28.141 177.607 72.115 1.00 51.08 C
ATOM 21 C6 C A 482 28.502 177.080 73.290 1.00 51.90 C
ATOM 22 P A A 483 31.698 178.713 77.448 1.00 57.21 P
ATOM 23 OP1 A A 483 32.357 178.863 78.767 1.00 56.48 O
ATOM 24 OP2 A A 483 30.663 179.694 77.029 1.00 58.32 O
ATOM 25 O5' A A 483 32.838 178.669 76.340 1.00 54.09 O
TER
ATOM 1 O3' C B 482 31.028 177.252 77.380 1.00 57.85 O
ATOM 2 P A B 483 31.698 178.713 77.448 1.00 57.21 P
ATOM 3 OP1 A B 483 32.357 178.863 78.767 1.00 56.48 O
ATOM 4 OP2 A B 483 30.663 179.694 77.029 1.00 58.32 O
ATOM 5 O5' A B 483 32.838 178.669 76.340 1.00 54.09 O
ATOM 6 C5' A B 483 33.545 179.857 75.969 1.00 53.41 C
ATOM 7 C4' A B 483 34.638 179.516 74.996 1.00 54.32 C
ATOM 8 O4' A B 483 35.661 178.740 75.663 1.00 54.50 O
ATOM 9 C3' A B 483 34.197 178.638 73.842 1.00 55.74 C
ATOM 10 O3' A B 483 33.589 179.438 72.833 1.00 58.65 O
ATOM 11 C2' A B 483 35.502 177.970 73.407 1.00 54.79 C
ATOM 12 O2' A B 483 36.298 178.753 72.542 1.00 53.80 O
ATOM 13 C1' A B 483 36.230 177.822 74.747 1.00 55.12 C
ATOM 14 N9 A B 483 36.193 176.492 75.350 1.00 54.77 N
ATOM 15 C8 A B 483 35.420 176.071 76.401 1.00 55.57 C
ATOM 16 N7 A B 483 35.636 174.828 76.750 1.00 57.26 N
ATOM 17 C5 A B 483 36.612 174.397 75.862 1.00 55.50 C
ATOM 18 C6 A B 483 37.272 173.164 75.707 1.00 55.46 C
ATOM 19 N6 A B 483 37.037 172.096 76.476 1.00 53.42 N
ATOM 20 N1 A B 483 38.188 173.064 74.719 1.00 55.30 N
ATOM 21 C2 A B 483 38.413 174.131 73.946 1.00 55.43 C
ATOM 22 N3 A B 483 37.855 175.340 73.993 1.00 55.76 N
ATOM 23 C4 A B 483 36.955 175.408 74.987 1.00 55.13 C
ATOM 24 P G B 484 32.240 178.939 72.116 1.00 59.92 P
ATOM 25 OP1 G B 484 31.618 180.108 71.442 1.00 60.97 O
ATOM 26 OP2 G B 484 31.449 178.159 73.103 1.00 59.49 O
ATOM 27 O5' G B 484 32.769 177.949 70.991 1.00 60.45 O
TER
ATOM 2 P C A 482 26.157 178.794 76.948 1.00 56.23 P
ATOM 3 OP1 C A 482 26.190 179.169 78.385 1.00 55.54 O
ATOM 4 OP2 C A 482 26.021 179.850 75.910 1.00 56.61 O
ATOM 5 O5' C A 482 27.464 177.949 76.608 1.00 56.33 O
ATOM 6 C5' C A 482 27.862 176.843 77.432 1.00 55.37 C
ATOM 7 C4' C A 482 28.983 176.082 76.775 1.00 55.89 C
ATOM 8 O4' C A 482 28.509 175.437 75.565 1.00 55.35 O
ATOM 9 C3' C A 482 30.159 176.918 76.299 1.00 56.89 C
ATOM 10 O3' C A 482 31.028 177.252 77.380 1.00 57.85 O
ATOM 11 C2' C A 482 30.812 175.993 75.273 1.00 56.88 C
ATOM 12 O2' C A 482 31.637 174.997 75.844 1.00 58.92 O
ATOM 13 C1' C A 482 29.586 175.319 74.647 1.00 55.22 C
ATOM 14 N1 C A 482 29.186 175.898 73.354 1.00 53.45 N
ATOM 15 C2 C A 482 29.525 175.214 72.176 1.00 53.87 C
ATOM 16 O2 C A 482 30.146 174.142 72.255 1.00 53.41 O
ATOM 17 N3 C A 482 29.167 175.739 70.984 1.00 53.48 N
ATOM 18 C4 C A 482 28.496 176.891 70.936 1.00 52.10 C
ATOM 19 N4 C A 482 28.156 177.364 69.734 1.00 51.06 N
ATOM 20 C5 C A 482 28.141 177.607 72.115 1.00 51.08 C
ATOM 21 C6 C A 482 28.502 177.080 73.290 1.00 51.90 C
ATOM 22 P A A 483 31.698 178.713 77.448 1.00 57.21 P
ATOM 23 OP1 A A 483 32.357 178.863 78.767 1.00 56.48 O
ATOM 24 OP2 A A 483 30.663 179.694 77.029 1.00 58.32 O
ATOM 25 O5' A A 483 32.838 178.669 76.340 1.00 54.09 O
TER
ATOM 1 O3' C B 482 31.028 177.252 77.380 1.00 57.85 O
ATOM 2 P A B 483 31.698 178.713 77.448 1.00 57.21 P
ATOM 3 OP1 A B 483 32.357 178.863 78.767 1.00 56.48 O
ATOM 4 OP2 A B 483 30.663 179.694 77.029 1.00 58.32 O
ATOM 5 O5' A B 483 32.838 178.669 76.340 1.00 54.09 O
ATOM 6 C5' A B 483 33.545 179.857 75.969 1.00 53.41 C
ATOM 7 C4' A B 483 34.638 179.516 74.996 1.00 54.32 C
ATOM 8 O4' A B 483 35.661 178.740 75.663 1.00 54.50 O
ATOM 9 C3' A B 483 34.197 178.638 73.842 1.00 55.74 C
ATOM 10 O3' A B 483 33.589 179.438 72.833 1.00 58.65 O
ATOM 11 C2' A B 483 35.502 177.970 73.407 1.00 54.79 C
ATOM 12 O2' A B 483 36.298 178.753 72.542 1.00 53.80 O
ATOM 13 C1' A B 483 36.230 177.822 74.747 1.00 55.12 C
ATOM 14 N9 A B 483 36.193 176.492 75.350 1.00 54.77 N
ATOM 15 C8 A B 483 35.420 176.071 76.401 1.00 55.57 C
ATOM 16 N7 A B 483 35.636 174.828 76.750 1.00 57.26 N
ATOM 17 C5 A B 483 36.612 174.397 75.862 1.00 55.50 C
ATOM 18 C6 A B 483 37.272 173.164 75.707 1.00 55.46 C
ATOM 19 N6 A B 483 37.037 172.096 76.476 1.00 53.42 N
ATOM 20 N1 A B 483 38.188 173.064 74.719 1.00 55.30 N
ATOM 21 C2 A B 483 38.413 174.131 73.946 1.00 55.43 C
ATOM 22 N3 A B 483 37.855 175.340 73.993 1.00 55.76 N
ATOM 23 C4 A B 483 36.955 175.408 74.987 1.00 55.13 C
ATOM 24 P G B 484 32.240 178.939 72.116 1.00 59.92 P
ATOM 25 OP1 G B 484 31.618 180.108 71.442 1.00 60.97 O
ATOM 26 OP2 G B 484 31.449 178.159 73.103 1.00 59.49 O
ATOM 27 O5' G B 484 32.769 177.949 70.991 1.00 60.45 O
TER
Atoms:
C2: (29.525,175.214,72.176)
OP1: (26.190,179.169,78.385)
OP2: (26.021,179.850,75.910)
C4: (28.496,176.891,70.936)
O5': (27.464,177.949,76.608)
C3': (30.159,176.918,76.299)
C1': (29.586,175.319,74.647)
O4': (28.509,175.437,75.565)
C5': (27.862,176.843,77.432)
P: (26.157,178.794,76.948)
O2: (30.146,174.142,72.255)
C4': (28.983,176.082,76.775)
C2': (30.812,175.993,75.273)
O2': (31.637,174.997,75.844)
N1: (29.186,175.898,73.354)
N3: (29.167,175.739,70.984)
N4: (28.156,177.364,69.734)
C6: (28.502,177.080,73.290)
C5: (28.141,177.607,72.115)
O3': (31.028,177.252,77.380)
OP1: (26.190,179.169,78.385)
OP2: (26.021,179.850,75.910)
C4: (28.496,176.891,70.936)
O5': (27.464,177.949,76.608)
C3': (30.159,176.918,76.299)
C1': (29.586,175.319,74.647)
O4': (28.509,175.437,75.565)
C5': (27.862,176.843,77.432)
P: (26.157,178.794,76.948)
O2: (30.146,174.142,72.255)
C4': (28.983,176.082,76.775)
C2': (30.812,175.993,75.273)
O2': (31.637,174.997,75.844)
N1: (29.186,175.898,73.354)
N3: (29.167,175.739,70.984)
N4: (28.156,177.364,69.734)
C6: (28.502,177.080,73.290)
C5: (28.141,177.607,72.115)
O3': (31.028,177.252,77.380)
OP1: (32.357,178.863,78.767)
OP2: (30.663,179.694,77.029)
C3': (34.197,178.638,73.842)
C1': (36.230,177.822,74.747)
C5': (33.545,179.857,75.969)
O4': (35.661,178.740,75.663)
C8: (35.420,176.071,76.401)
O2': (36.298,178.753,72.542)
C6: (37.272,173.164,75.707)
C5: (36.612,174.397,75.862)
C4: (36.955,175.408,74.987)
P: (31.698,178.713,77.448)
C4': (34.638,179.516,74.996)
C2': (35.502,177.970,73.407)
C2: (38.413,174.131,73.946)
N1: (38.188,173.064,74.719)
N3: (37.855,175.340,73.993)
N6: (37.037,172.096,76.476)
N7: (35.636,174.828,76.750)
N9: (36.193,176.492,75.350)
O5': (32.838,178.669,76.340)
O3': (33.589,179.438,72.833)
OP2: (30.663,179.694,77.029)
C3': (34.197,178.638,73.842)
C1': (36.230,177.822,74.747)
C5': (33.545,179.857,75.969)
O4': (35.661,178.740,75.663)
C8: (35.420,176.071,76.401)
O2': (36.298,178.753,72.542)
C6: (37.272,173.164,75.707)
C5: (36.612,174.397,75.862)
C4: (36.955,175.408,74.987)
P: (31.698,178.713,77.448)
C4': (34.638,179.516,74.996)
C2': (35.502,177.970,73.407)
C2: (38.413,174.131,73.946)
N1: (38.188,173.064,74.719)
N3: (37.855,175.340,73.993)
N6: (37.037,172.096,76.476)
N7: (35.636,174.828,76.750)
N9: (36.193,176.492,75.350)
O5': (32.838,178.669,76.340)
O3': (33.589,179.438,72.833)
Image (generated by PyMOL):