Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0482:0483
Extra
PDB:
ATOM 1 O3' U A 481 25.179 177.609 76.765 1.00 52.33 O
ATOM 2 P C A 482 26.367 178.681 76.880 1.00 54.21 P
ATOM 3 OP1 C A 482 26.431 179.128 78.294 1.00 53.61 O
ATOM 4 OP2 C A 482 26.189 179.684 75.798 1.00 54.78 O
ATOM 5 O5' C A 482 27.675 177.835 76.553 1.00 53.73 O
ATOM 6 C5' C A 482 28.055 176.737 77.386 1.00 54.79 C
ATOM 7 C4' C A 482 29.152 175.947 76.734 1.00 55.94 C
ATOM 8 O4' C A 482 28.657 175.315 75.527 1.00 56.34 O
ATOM 9 C3' C A 482 30.338 176.756 76.248 1.00 57.34 C
ATOM 10 O3' C A 482 31.215 177.093 77.321 1.00 58.78 O
ATOM 11 C2' C A 482 30.969 175.814 75.226 1.00 56.95 C
ATOM 12 O2' C A 482 31.773 174.809 75.807 1.00 58.45 O
ATOM 13 C1' C A 482 29.728 175.164 74.606 1.00 56.18 C
ATOM 14 N1 C A 482 29.339 175.751 73.310 1.00 55.55 N
ATOM 15 C2 C A 482 29.795 175.144 72.134 1.00 55.82 C
ATOM 16 O2 C A 482 30.495 174.123 72.210 1.00 55.67 O
ATOM 17 N3 C A 482 29.459 175.681 70.943 1.00 56.58 N
ATOM 18 C4 C A 482 28.695 176.771 70.893 1.00 54.90 C
ATOM 19 N4 C A 482 28.388 177.257 69.691 1.00 55.50 N
ATOM 20 C5 C A 482 28.213 177.407 72.071 1.00 54.21 C
ATOM 21 C6 C A 482 28.555 176.870 73.247 1.00 54.91 C
ATOM 22 P A A 483 31.884 178.554 77.373 1.00 59.72 P
ATOM 23 OP1 A A 483 32.536 178.736 78.693 1.00 59.56 O
ATOM 24 OP2 A A 483 30.854 179.527 76.922 1.00 60.60 O
ATOM 25 O5' A A 483 33.026 178.489 76.270 1.00 56.94 O
TER
ATOM 1 O3' C B 482 31.215 177.093 77.321 1.00 58.78 O
ATOM 2 P A B 483 31.884 178.554 77.373 1.00 59.72 P
ATOM 3 OP1 A B 483 32.536 178.736 78.693 1.00 59.56 O
ATOM 4 OP2 A B 483 30.854 179.527 76.922 1.00 60.60 O
ATOM 5 O5' A B 483 33.026 178.489 76.270 1.00 56.94 O
ATOM 6 C5' A B 483 33.699 179.674 75.846 1.00 56.41 C
ATOM 7 C4' A B 483 34.807 179.317 74.896 1.00 57.48 C
ATOM 8 O4' A B 483 35.801 178.544 75.602 1.00 57.13 O
ATOM 9 C3' A B 483 34.400 178.412 73.749 1.00 59.05 C
ATOM 10 O3' A B 483 33.805 179.173 72.705 1.00 61.55 O
ATOM 11 C2' A B 483 35.726 177.775 73.344 1.00 58.17 C
ATOM 12 O2' A B 483 36.518 178.581 72.497 1.00 57.59 O
ATOM 13 C1' A B 483 36.426 177.652 74.699 1.00 58.43 C
ATOM 14 N9 A B 483 36.411 176.318 75.284 1.00 59.09 N
ATOM 15 C8 A B 483 35.650 175.851 76.324 1.00 60.26 C
ATOM 16 N7 A B 483 35.894 174.603 76.636 1.00 62.15 N
ATOM 17 C5 A B 483 36.879 174.221 75.736 1.00 61.40 C
ATOM 18 C6 A B 483 37.570 173.012 75.545 1.00 62.12 C
ATOM 19 N6 A B 483 37.365 171.916 76.281 1.00 62.06 N
ATOM 20 N1 A B 483 38.489 172.965 74.557 1.00 62.28 N
ATOM 21 C2 A B 483 38.686 174.060 73.816 1.00 62.68 C
ATOM 22 N3 A B 483 38.100 175.251 73.898 1.00 61.67 N
ATOM 23 C4 A B 483 37.199 175.265 74.893 1.00 60.70 C
ATOM 24 P G B 484 32.369 178.747 72.119 1.00 63.66 P
ATOM 25 OP1 G B 484 31.727 179.980 71.602 1.00 65.05 O
ATOM 26 OP2 G B 484 31.663 177.932 73.139 1.00 62.87 O
ATOM 27 O5' G B 484 32.735 177.817 70.879 1.00 64.18 O
TER
ATOM 2 P C A 482 26.367 178.681 76.880 1.00 54.21 P
ATOM 3 OP1 C A 482 26.431 179.128 78.294 1.00 53.61 O
ATOM 4 OP2 C A 482 26.189 179.684 75.798 1.00 54.78 O
ATOM 5 O5' C A 482 27.675 177.835 76.553 1.00 53.73 O
ATOM 6 C5' C A 482 28.055 176.737 77.386 1.00 54.79 C
ATOM 7 C4' C A 482 29.152 175.947 76.734 1.00 55.94 C
ATOM 8 O4' C A 482 28.657 175.315 75.527 1.00 56.34 O
ATOM 9 C3' C A 482 30.338 176.756 76.248 1.00 57.34 C
ATOM 10 O3' C A 482 31.215 177.093 77.321 1.00 58.78 O
ATOM 11 C2' C A 482 30.969 175.814 75.226 1.00 56.95 C
ATOM 12 O2' C A 482 31.773 174.809 75.807 1.00 58.45 O
ATOM 13 C1' C A 482 29.728 175.164 74.606 1.00 56.18 C
ATOM 14 N1 C A 482 29.339 175.751 73.310 1.00 55.55 N
ATOM 15 C2 C A 482 29.795 175.144 72.134 1.00 55.82 C
ATOM 16 O2 C A 482 30.495 174.123 72.210 1.00 55.67 O
ATOM 17 N3 C A 482 29.459 175.681 70.943 1.00 56.58 N
ATOM 18 C4 C A 482 28.695 176.771 70.893 1.00 54.90 C
ATOM 19 N4 C A 482 28.388 177.257 69.691 1.00 55.50 N
ATOM 20 C5 C A 482 28.213 177.407 72.071 1.00 54.21 C
ATOM 21 C6 C A 482 28.555 176.870 73.247 1.00 54.91 C
ATOM 22 P A A 483 31.884 178.554 77.373 1.00 59.72 P
ATOM 23 OP1 A A 483 32.536 178.736 78.693 1.00 59.56 O
ATOM 24 OP2 A A 483 30.854 179.527 76.922 1.00 60.60 O
ATOM 25 O5' A A 483 33.026 178.489 76.270 1.00 56.94 O
TER
ATOM 1 O3' C B 482 31.215 177.093 77.321 1.00 58.78 O
ATOM 2 P A B 483 31.884 178.554 77.373 1.00 59.72 P
ATOM 3 OP1 A B 483 32.536 178.736 78.693 1.00 59.56 O
ATOM 4 OP2 A B 483 30.854 179.527 76.922 1.00 60.60 O
ATOM 5 O5' A B 483 33.026 178.489 76.270 1.00 56.94 O
ATOM 6 C5' A B 483 33.699 179.674 75.846 1.00 56.41 C
ATOM 7 C4' A B 483 34.807 179.317 74.896 1.00 57.48 C
ATOM 8 O4' A B 483 35.801 178.544 75.602 1.00 57.13 O
ATOM 9 C3' A B 483 34.400 178.412 73.749 1.00 59.05 C
ATOM 10 O3' A B 483 33.805 179.173 72.705 1.00 61.55 O
ATOM 11 C2' A B 483 35.726 177.775 73.344 1.00 58.17 C
ATOM 12 O2' A B 483 36.518 178.581 72.497 1.00 57.59 O
ATOM 13 C1' A B 483 36.426 177.652 74.699 1.00 58.43 C
ATOM 14 N9 A B 483 36.411 176.318 75.284 1.00 59.09 N
ATOM 15 C8 A B 483 35.650 175.851 76.324 1.00 60.26 C
ATOM 16 N7 A B 483 35.894 174.603 76.636 1.00 62.15 N
ATOM 17 C5 A B 483 36.879 174.221 75.736 1.00 61.40 C
ATOM 18 C6 A B 483 37.570 173.012 75.545 1.00 62.12 C
ATOM 19 N6 A B 483 37.365 171.916 76.281 1.00 62.06 N
ATOM 20 N1 A B 483 38.489 172.965 74.557 1.00 62.28 N
ATOM 21 C2 A B 483 38.686 174.060 73.816 1.00 62.68 C
ATOM 22 N3 A B 483 38.100 175.251 73.898 1.00 61.67 N
ATOM 23 C4 A B 483 37.199 175.265 74.893 1.00 60.70 C
ATOM 24 P G B 484 32.369 178.747 72.119 1.00 63.66 P
ATOM 25 OP1 G B 484 31.727 179.980 71.602 1.00 65.05 O
ATOM 26 OP2 G B 484 31.663 177.932 73.139 1.00 62.87 O
ATOM 27 O5' G B 484 32.735 177.817 70.879 1.00 64.18 O
TER
Atoms:
C2: (29.795,175.144,72.134)
OP1: (26.431,179.128,78.294)
OP2: (26.189,179.684,75.798)
C4: (28.695,176.771,70.893)
O5': (27.675,177.835,76.553)
C3': (30.338,176.756,76.248)
C1': (29.728,175.164,74.606)
O4': (28.657,175.315,75.527)
C5': (28.055,176.737,77.386)
P: (26.367,178.681,76.880)
O2: (30.495,174.123,72.210)
C4': (29.152,175.947,76.734)
C2': (30.969,175.814,75.226)
O2': (31.773,174.809,75.807)
N1: (29.339,175.751,73.310)
N3: (29.459,175.681,70.943)
N4: (28.388,177.257,69.691)
C6: (28.555,176.870,73.247)
C5: (28.213,177.407,72.071)
O3': (31.215,177.093,77.321)
OP1: (26.431,179.128,78.294)
OP2: (26.189,179.684,75.798)
C4: (28.695,176.771,70.893)
O5': (27.675,177.835,76.553)
C3': (30.338,176.756,76.248)
C1': (29.728,175.164,74.606)
O4': (28.657,175.315,75.527)
C5': (28.055,176.737,77.386)
P: (26.367,178.681,76.880)
O2: (30.495,174.123,72.210)
C4': (29.152,175.947,76.734)
C2': (30.969,175.814,75.226)
O2': (31.773,174.809,75.807)
N1: (29.339,175.751,73.310)
N3: (29.459,175.681,70.943)
N4: (28.388,177.257,69.691)
C6: (28.555,176.870,73.247)
C5: (28.213,177.407,72.071)
O3': (31.215,177.093,77.321)
OP1: (32.536,178.736,78.693)
OP2: (30.854,179.527,76.922)
C3': (34.400,178.412,73.749)
C1': (36.426,177.652,74.699)
C5': (33.699,179.674,75.846)
O4': (35.801,178.544,75.602)
C8: (35.650,175.851,76.324)
O2': (36.518,178.581,72.497)
C6: (37.570,173.012,75.545)
C5: (36.879,174.221,75.736)
C4: (37.199,175.265,74.893)
P: (31.884,178.554,77.373)
C4': (34.807,179.317,74.896)
C2': (35.726,177.775,73.344)
C2: (38.686,174.060,73.816)
N1: (38.489,172.965,74.557)
N3: (38.100,175.251,73.898)
N6: (37.365,171.916,76.281)
N7: (35.894,174.603,76.636)
N9: (36.411,176.318,75.284)
O5': (33.026,178.489,76.270)
O3': (33.805,179.173,72.705)
OP2: (30.854,179.527,76.922)
C3': (34.400,178.412,73.749)
C1': (36.426,177.652,74.699)
C5': (33.699,179.674,75.846)
O4': (35.801,178.544,75.602)
C8: (35.650,175.851,76.324)
O2': (36.518,178.581,72.497)
C6: (37.570,173.012,75.545)
C5: (36.879,174.221,75.736)
C4: (37.199,175.265,74.893)
P: (31.884,178.554,77.373)
C4': (34.807,179.317,74.896)
C2': (35.726,177.775,73.344)
C2: (38.686,174.060,73.816)
N1: (38.489,172.965,74.557)
N3: (38.100,175.251,73.898)
N6: (37.365,171.916,76.281)
N7: (35.894,174.603,76.636)
N9: (36.411,176.318,75.284)
O5': (33.026,178.489,76.270)
O3': (33.805,179.173,72.705)
Image (generated by PyMOL):