Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0482:0483
Extra
PDB:
ATOM 1 O3' U A 481 24.997 178.319 77.110 1.00 75.91 O
ATOM 2 P C A 482 26.350 179.183 77.255 1.00 79.24 P
ATOM 3 OP1 C A 482 26.530 179.506 78.699 1.00 79.99 O
ATOM 4 OP2 C A 482 26.311 180.286 76.257 1.00 79.83 O
ATOM 5 O5' C A 482 27.510 178.178 76.823 1.00 78.25 O
ATOM 6 C5' C A 482 27.923 177.108 77.688 1.00 77.27 C
ATOM 7 C4' C A 482 29.048 176.328 77.054 1.00 77.21 C
ATOM 8 O4' C A 482 28.574 175.668 75.850 1.00 76.33 O
ATOM 9 C3' C A 482 30.244 177.139 76.578 1.00 77.58 C
ATOM 10 O3' C A 482 31.132 177.470 77.648 1.00 78.13 O
ATOM 11 C2' C A 482 30.882 176.196 75.563 1.00 77.50 C
ATOM 12 O2' C A 482 31.669 175.184 76.160 1.00 79.64 O
ATOM 13 C1' C A 482 29.645 175.560 74.920 1.00 76.82 C
ATOM 14 N1 C A 482 29.250 176.203 73.651 1.00 76.44 N
ATOM 15 C2 C A 482 29.723 175.666 72.445 1.00 76.47 C
ATOM 16 O2 C A 482 30.462 174.671 72.472 1.00 77.30 O
ATOM 17 N3 C A 482 29.366 176.247 71.281 1.00 76.74 N
ATOM 18 C4 C A 482 28.577 177.321 71.286 1.00 75.57 C
ATOM 19 N4 C A 482 28.251 177.857 70.110 1.00 74.93 N
ATOM 20 C5 C A 482 28.088 177.892 72.494 1.00 75.35 C
ATOM 21 C6 C A 482 28.443 177.307 73.642 1.00 75.84 C
ATOM 22 P A A 483 31.755 178.952 77.742 1.00 77.56 P
ATOM 23 OP1 A A 483 32.555 179.063 78.989 1.00 77.17 O
ATOM 24 OP2 A A 483 30.641 179.905 77.497 1.00 77.79 O
ATOM 25 O5' A A 483 32.766 179.035 76.517 1.00 76.72 O
TER
ATOM 1 O3' C B 482 31.132 177.470 77.648 1.00 78.13 O
ATOM 2 P A B 483 31.755 178.952 77.742 1.00 77.56 P
ATOM 3 OP1 A B 483 32.555 179.063 78.989 1.00 77.17 O
ATOM 4 OP2 A B 483 30.641 179.905 77.497 1.00 77.79 O
ATOM 5 O5' A B 483 32.766 179.035 76.517 1.00 76.72 O
ATOM 6 C5' A B 483 33.360 180.286 76.144 1.00 75.86 C
ATOM 7 C4' A B 483 34.502 180.054 75.189 1.00 75.49 C
ATOM 8 O4' A B 483 35.580 179.378 75.875 1.00 74.63 O
ATOM 9 C3' A B 483 34.188 179.157 74.008 1.00 76.78 C
ATOM 10 O3' A B 483 33.536 179.903 72.984 1.00 79.34 O
ATOM 11 C2' A B 483 35.570 178.648 73.605 1.00 75.72 C
ATOM 12 O2' A B 483 36.308 179.551 72.809 1.00 74.67 O
ATOM 13 C1' A B 483 36.253 178.522 74.970 1.00 74.96 C
ATOM 14 N9 A B 483 36.243 177.174 75.528 1.00 74.98 N
ATOM 15 C8 A B 483 35.516 176.706 76.597 1.00 76.02 C
ATOM 16 N7 A B 483 35.738 175.446 76.877 1.00 76.62 N
ATOM 17 C5 A B 483 36.673 175.055 75.926 1.00 75.17 C
ATOM 18 C6 A B 483 37.322 173.834 75.687 1.00 74.34 C
ATOM 19 N6 A B 483 37.120 172.735 76.419 1.00 73.09 N
ATOM 20 N1 A B 483 38.196 173.778 74.659 1.00 74.02 N
ATOM 21 C2 A B 483 38.393 174.880 73.927 1.00 74.74 C
ATOM 22 N3 A B 483 37.843 176.087 74.053 1.00 74.62 N
ATOM 23 C4 A B 483 36.985 176.108 75.085 1.00 74.85 C
ATOM 24 P G B 484 32.201 179.330 72.293 1.00 80.14 P
ATOM 25 OP1 G B 484 31.527 180.480 71.647 1.00 81.43 O
ATOM 26 OP2 G B 484 31.456 178.507 73.283 1.00 78.87 O
ATOM 27 O5' G B 484 32.760 178.392 71.138 1.00 80.58 O
TER
ATOM 2 P C A 482 26.350 179.183 77.255 1.00 79.24 P
ATOM 3 OP1 C A 482 26.530 179.506 78.699 1.00 79.99 O
ATOM 4 OP2 C A 482 26.311 180.286 76.257 1.00 79.83 O
ATOM 5 O5' C A 482 27.510 178.178 76.823 1.00 78.25 O
ATOM 6 C5' C A 482 27.923 177.108 77.688 1.00 77.27 C
ATOM 7 C4' C A 482 29.048 176.328 77.054 1.00 77.21 C
ATOM 8 O4' C A 482 28.574 175.668 75.850 1.00 76.33 O
ATOM 9 C3' C A 482 30.244 177.139 76.578 1.00 77.58 C
ATOM 10 O3' C A 482 31.132 177.470 77.648 1.00 78.13 O
ATOM 11 C2' C A 482 30.882 176.196 75.563 1.00 77.50 C
ATOM 12 O2' C A 482 31.669 175.184 76.160 1.00 79.64 O
ATOM 13 C1' C A 482 29.645 175.560 74.920 1.00 76.82 C
ATOM 14 N1 C A 482 29.250 176.203 73.651 1.00 76.44 N
ATOM 15 C2 C A 482 29.723 175.666 72.445 1.00 76.47 C
ATOM 16 O2 C A 482 30.462 174.671 72.472 1.00 77.30 O
ATOM 17 N3 C A 482 29.366 176.247 71.281 1.00 76.74 N
ATOM 18 C4 C A 482 28.577 177.321 71.286 1.00 75.57 C
ATOM 19 N4 C A 482 28.251 177.857 70.110 1.00 74.93 N
ATOM 20 C5 C A 482 28.088 177.892 72.494 1.00 75.35 C
ATOM 21 C6 C A 482 28.443 177.307 73.642 1.00 75.84 C
ATOM 22 P A A 483 31.755 178.952 77.742 1.00 77.56 P
ATOM 23 OP1 A A 483 32.555 179.063 78.989 1.00 77.17 O
ATOM 24 OP2 A A 483 30.641 179.905 77.497 1.00 77.79 O
ATOM 25 O5' A A 483 32.766 179.035 76.517 1.00 76.72 O
TER
ATOM 1 O3' C B 482 31.132 177.470 77.648 1.00 78.13 O
ATOM 2 P A B 483 31.755 178.952 77.742 1.00 77.56 P
ATOM 3 OP1 A B 483 32.555 179.063 78.989 1.00 77.17 O
ATOM 4 OP2 A B 483 30.641 179.905 77.497 1.00 77.79 O
ATOM 5 O5' A B 483 32.766 179.035 76.517 1.00 76.72 O
ATOM 6 C5' A B 483 33.360 180.286 76.144 1.00 75.86 C
ATOM 7 C4' A B 483 34.502 180.054 75.189 1.00 75.49 C
ATOM 8 O4' A B 483 35.580 179.378 75.875 1.00 74.63 O
ATOM 9 C3' A B 483 34.188 179.157 74.008 1.00 76.78 C
ATOM 10 O3' A B 483 33.536 179.903 72.984 1.00 79.34 O
ATOM 11 C2' A B 483 35.570 178.648 73.605 1.00 75.72 C
ATOM 12 O2' A B 483 36.308 179.551 72.809 1.00 74.67 O
ATOM 13 C1' A B 483 36.253 178.522 74.970 1.00 74.96 C
ATOM 14 N9 A B 483 36.243 177.174 75.528 1.00 74.98 N
ATOM 15 C8 A B 483 35.516 176.706 76.597 1.00 76.02 C
ATOM 16 N7 A B 483 35.738 175.446 76.877 1.00 76.62 N
ATOM 17 C5 A B 483 36.673 175.055 75.926 1.00 75.17 C
ATOM 18 C6 A B 483 37.322 173.834 75.687 1.00 74.34 C
ATOM 19 N6 A B 483 37.120 172.735 76.419 1.00 73.09 N
ATOM 20 N1 A B 483 38.196 173.778 74.659 1.00 74.02 N
ATOM 21 C2 A B 483 38.393 174.880 73.927 1.00 74.74 C
ATOM 22 N3 A B 483 37.843 176.087 74.053 1.00 74.62 N
ATOM 23 C4 A B 483 36.985 176.108 75.085 1.00 74.85 C
ATOM 24 P G B 484 32.201 179.330 72.293 1.00 80.14 P
ATOM 25 OP1 G B 484 31.527 180.480 71.647 1.00 81.43 O
ATOM 26 OP2 G B 484 31.456 178.507 73.283 1.00 78.87 O
ATOM 27 O5' G B 484 32.760 178.392 71.138 1.00 80.58 O
TER
Atoms:
C2: (29.723,175.666,72.445)
OP1: (26.530,179.506,78.699)
OP2: (26.311,180.286,76.257)
C4: (28.577,177.321,71.286)
O5': (27.510,178.178,76.823)
C3': (30.244,177.139,76.578)
C1': (29.645,175.560,74.920)
O4': (28.574,175.668,75.850)
C5': (27.923,177.108,77.688)
P: (26.350,179.183,77.255)
O2: (30.462,174.671,72.472)
C4': (29.048,176.328,77.054)
C2': (30.882,176.196,75.563)
O2': (31.669,175.184,76.160)
N1: (29.250,176.203,73.651)
N3: (29.366,176.247,71.281)
N4: (28.251,177.857,70.110)
C6: (28.443,177.307,73.642)
C5: (28.088,177.892,72.494)
O3': (31.132,177.470,77.648)
OP1: (26.530,179.506,78.699)
OP2: (26.311,180.286,76.257)
C4: (28.577,177.321,71.286)
O5': (27.510,178.178,76.823)
C3': (30.244,177.139,76.578)
C1': (29.645,175.560,74.920)
O4': (28.574,175.668,75.850)
C5': (27.923,177.108,77.688)
P: (26.350,179.183,77.255)
O2: (30.462,174.671,72.472)
C4': (29.048,176.328,77.054)
C2': (30.882,176.196,75.563)
O2': (31.669,175.184,76.160)
N1: (29.250,176.203,73.651)
N3: (29.366,176.247,71.281)
N4: (28.251,177.857,70.110)
C6: (28.443,177.307,73.642)
C5: (28.088,177.892,72.494)
O3': (31.132,177.470,77.648)
OP1: (32.555,179.063,78.989)
OP2: (30.641,179.905,77.497)
C3': (34.188,179.157,74.008)
C1': (36.253,178.522,74.970)
C5': (33.360,180.286,76.144)
O4': (35.580,179.378,75.875)
C8: (35.516,176.706,76.597)
O2': (36.308,179.551,72.809)
C6: (37.322,173.834,75.687)
C5: (36.673,175.055,75.926)
C4: (36.985,176.108,75.085)
P: (31.755,178.952,77.742)
C4': (34.502,180.054,75.189)
C2': (35.570,178.648,73.605)
C2: (38.393,174.880,73.927)
N1: (38.196,173.778,74.659)
N3: (37.843,176.087,74.053)
N6: (37.120,172.735,76.419)
N7: (35.738,175.446,76.877)
N9: (36.243,177.174,75.528)
O5': (32.766,179.035,76.517)
O3': (33.536,179.903,72.984)
OP2: (30.641,179.905,77.497)
C3': (34.188,179.157,74.008)
C1': (36.253,178.522,74.970)
C5': (33.360,180.286,76.144)
O4': (35.580,179.378,75.875)
C8: (35.516,176.706,76.597)
O2': (36.308,179.551,72.809)
C6: (37.322,173.834,75.687)
C5: (36.673,175.055,75.926)
C4: (36.985,176.108,75.085)
P: (31.755,178.952,77.742)
C4': (34.502,180.054,75.189)
C2': (35.570,178.648,73.605)
C2: (38.393,174.880,73.927)
N1: (38.196,173.778,74.659)
N3: (37.843,176.087,74.053)
N6: (37.120,172.735,76.419)
N7: (35.738,175.446,76.877)
N9: (36.243,177.174,75.528)
O5': (32.766,179.035,76.517)
O3': (33.536,179.903,72.984)
Image (generated by PyMOL):