Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0482:0483
Extra
PDB:
ATOM 1 O3' U A 481 25.060 177.853 76.758 1.00 57.96 O
ATOM 2 P C A 482 26.279 178.879 76.897 1.00 61.53 P
ATOM 3 OP1 C A 482 26.358 179.250 78.331 1.00 61.96 O
ATOM 4 OP2 C A 482 26.106 179.940 75.866 1.00 62.20 O
ATOM 5 O5' C A 482 27.565 178.016 76.518 1.00 61.24 O
ATOM 6 C5' C A 482 27.994 176.937 77.359 1.00 61.27 C
ATOM 7 C4' C A 482 29.098 176.154 76.693 1.00 61.91 C
ATOM 8 O4' C A 482 28.599 175.483 75.506 1.00 61.31 O
ATOM 9 C3' C A 482 30.277 176.959 76.177 1.00 62.74 C
ATOM 10 O3' C A 482 31.172 177.315 77.227 1.00 63.35 O
ATOM 11 C2' C A 482 30.903 175.987 75.183 1.00 62.95 C
ATOM 12 O2' C A 482 31.681 174.981 75.800 1.00 64.72 O
ATOM 13 C1' C A 482 29.659 175.338 74.572 1.00 61.80 C
ATOM 14 N1 C A 482 29.264 175.950 73.292 1.00 61.52 N
ATOM 15 C2 C A 482 29.638 175.315 72.100 1.00 61.88 C
ATOM 16 O2 C A 482 30.299 174.267 72.152 1.00 62.75 O
ATOM 17 N3 C A 482 29.276 175.860 70.922 1.00 61.34 N
ATOM 18 C4 C A 482 28.575 176.991 70.898 1.00 59.90 C
ATOM 19 N4 C A 482 28.237 177.483 69.706 1.00 60.01 N
ATOM 20 C5 C A 482 28.189 177.664 72.091 1.00 59.76 C
ATOM 21 C6 C A 482 28.549 177.114 73.255 1.00 60.59 C
ATOM 22 P A A 483 31.812 178.790 77.264 1.00 63.71 P
ATOM 23 OP1 A A 483 32.324 179.053 78.633 1.00 63.58 O
ATOM 24 OP2 A A 483 30.821 179.719 76.659 1.00 65.34 O
ATOM 25 O5' A A 483 33.061 178.711 76.286 1.00 61.33 O
TER
ATOM 1 O3' C B 482 31.172 177.315 77.227 1.00 63.35 O
ATOM 2 P A B 483 31.812 178.790 77.264 1.00 63.71 P
ATOM 3 OP1 A B 483 32.324 179.053 78.633 1.00 63.58 O
ATOM 4 OP2 A B 483 30.821 179.719 76.659 1.00 65.34 O
ATOM 5 O5' A B 483 33.061 178.711 76.286 1.00 61.33 O
ATOM 6 C5' A B 483 33.717 179.903 75.856 1.00 61.51 C
ATOM 7 C4' A B 483 34.786 179.566 74.862 1.00 62.83 C
ATOM 8 O4' A B 483 35.831 178.818 75.523 1.00 62.53 O
ATOM 9 C3' A B 483 34.339 178.661 73.729 1.00 64.58 C
ATOM 10 O3' A B 483 33.688 179.421 72.717 1.00 67.91 O
ATOM 11 C2' A B 483 35.652 178.020 73.281 1.00 63.70 C
ATOM 12 O2' A B 483 36.437 178.816 72.418 1.00 62.34 O
ATOM 13 C1' A B 483 36.386 177.881 74.618 1.00 63.44 C
ATOM 14 N9 A B 483 36.291 176.557 75.220 1.00 63.12 N
ATOM 15 C8 A B 483 35.501 176.155 76.264 1.00 63.74 C
ATOM 16 N7 A B 483 35.668 174.901 76.598 1.00 65.47 N
ATOM 17 C5 A B 483 36.629 174.445 75.706 1.00 64.81 C
ATOM 18 C6 A B 483 37.247 173.193 75.536 1.00 65.20 C
ATOM 19 N6 A B 483 36.979 172.121 76.287 1.00 65.23 N
ATOM 20 N1 A B 483 38.159 173.076 74.551 1.00 65.43 N
ATOM 21 C2 A B 483 38.423 174.145 73.793 1.00 65.36 C
ATOM 22 N3 A B 483 37.910 175.369 73.855 1.00 64.68 N
ATOM 23 C4 A B 483 37.011 175.453 74.847 1.00 63.83 C
ATOM 24 P G B 484 32.253 178.952 72.156 1.00 70.56 P
ATOM 25 OP1 G B 484 31.585 180.158 71.593 1.00 70.79 O
ATOM 26 OP2 G B 484 31.566 178.163 73.214 1.00 68.20 O
ATOM 27 O5' G B 484 32.629 177.987 70.943 1.00 70.58 O
TER
ATOM 2 P C A 482 26.279 178.879 76.897 1.00 61.53 P
ATOM 3 OP1 C A 482 26.358 179.250 78.331 1.00 61.96 O
ATOM 4 OP2 C A 482 26.106 179.940 75.866 1.00 62.20 O
ATOM 5 O5' C A 482 27.565 178.016 76.518 1.00 61.24 O
ATOM 6 C5' C A 482 27.994 176.937 77.359 1.00 61.27 C
ATOM 7 C4' C A 482 29.098 176.154 76.693 1.00 61.91 C
ATOM 8 O4' C A 482 28.599 175.483 75.506 1.00 61.31 O
ATOM 9 C3' C A 482 30.277 176.959 76.177 1.00 62.74 C
ATOM 10 O3' C A 482 31.172 177.315 77.227 1.00 63.35 O
ATOM 11 C2' C A 482 30.903 175.987 75.183 1.00 62.95 C
ATOM 12 O2' C A 482 31.681 174.981 75.800 1.00 64.72 O
ATOM 13 C1' C A 482 29.659 175.338 74.572 1.00 61.80 C
ATOM 14 N1 C A 482 29.264 175.950 73.292 1.00 61.52 N
ATOM 15 C2 C A 482 29.638 175.315 72.100 1.00 61.88 C
ATOM 16 O2 C A 482 30.299 174.267 72.152 1.00 62.75 O
ATOM 17 N3 C A 482 29.276 175.860 70.922 1.00 61.34 N
ATOM 18 C4 C A 482 28.575 176.991 70.898 1.00 59.90 C
ATOM 19 N4 C A 482 28.237 177.483 69.706 1.00 60.01 N
ATOM 20 C5 C A 482 28.189 177.664 72.091 1.00 59.76 C
ATOM 21 C6 C A 482 28.549 177.114 73.255 1.00 60.59 C
ATOM 22 P A A 483 31.812 178.790 77.264 1.00 63.71 P
ATOM 23 OP1 A A 483 32.324 179.053 78.633 1.00 63.58 O
ATOM 24 OP2 A A 483 30.821 179.719 76.659 1.00 65.34 O
ATOM 25 O5' A A 483 33.061 178.711 76.286 1.00 61.33 O
TER
ATOM 1 O3' C B 482 31.172 177.315 77.227 1.00 63.35 O
ATOM 2 P A B 483 31.812 178.790 77.264 1.00 63.71 P
ATOM 3 OP1 A B 483 32.324 179.053 78.633 1.00 63.58 O
ATOM 4 OP2 A B 483 30.821 179.719 76.659 1.00 65.34 O
ATOM 5 O5' A B 483 33.061 178.711 76.286 1.00 61.33 O
ATOM 6 C5' A B 483 33.717 179.903 75.856 1.00 61.51 C
ATOM 7 C4' A B 483 34.786 179.566 74.862 1.00 62.83 C
ATOM 8 O4' A B 483 35.831 178.818 75.523 1.00 62.53 O
ATOM 9 C3' A B 483 34.339 178.661 73.729 1.00 64.58 C
ATOM 10 O3' A B 483 33.688 179.421 72.717 1.00 67.91 O
ATOM 11 C2' A B 483 35.652 178.020 73.281 1.00 63.70 C
ATOM 12 O2' A B 483 36.437 178.816 72.418 1.00 62.34 O
ATOM 13 C1' A B 483 36.386 177.881 74.618 1.00 63.44 C
ATOM 14 N9 A B 483 36.291 176.557 75.220 1.00 63.12 N
ATOM 15 C8 A B 483 35.501 176.155 76.264 1.00 63.74 C
ATOM 16 N7 A B 483 35.668 174.901 76.598 1.00 65.47 N
ATOM 17 C5 A B 483 36.629 174.445 75.706 1.00 64.81 C
ATOM 18 C6 A B 483 37.247 173.193 75.536 1.00 65.20 C
ATOM 19 N6 A B 483 36.979 172.121 76.287 1.00 65.23 N
ATOM 20 N1 A B 483 38.159 173.076 74.551 1.00 65.43 N
ATOM 21 C2 A B 483 38.423 174.145 73.793 1.00 65.36 C
ATOM 22 N3 A B 483 37.910 175.369 73.855 1.00 64.68 N
ATOM 23 C4 A B 483 37.011 175.453 74.847 1.00 63.83 C
ATOM 24 P G B 484 32.253 178.952 72.156 1.00 70.56 P
ATOM 25 OP1 G B 484 31.585 180.158 71.593 1.00 70.79 O
ATOM 26 OP2 G B 484 31.566 178.163 73.214 1.00 68.20 O
ATOM 27 O5' G B 484 32.629 177.987 70.943 1.00 70.58 O
TER
Atoms:
C2: (29.638,175.315,72.100)
OP1: (26.358,179.250,78.331)
OP2: (26.106,179.940,75.866)
C4: (28.575,176.991,70.898)
O5': (27.565,178.016,76.518)
C3': (30.277,176.959,76.177)
C1': (29.659,175.338,74.572)
O4': (28.599,175.483,75.506)
C5': (27.994,176.937,77.359)
P: (26.279,178.879,76.897)
O2: (30.299,174.267,72.152)
C4': (29.098,176.154,76.693)
C2': (30.903,175.987,75.183)
O2': (31.681,174.981,75.800)
N1: (29.264,175.950,73.292)
N3: (29.276,175.860,70.922)
N4: (28.237,177.483,69.706)
C6: (28.549,177.114,73.255)
C5: (28.189,177.664,72.091)
O3': (31.172,177.315,77.227)
OP1: (26.358,179.250,78.331)
OP2: (26.106,179.940,75.866)
C4: (28.575,176.991,70.898)
O5': (27.565,178.016,76.518)
C3': (30.277,176.959,76.177)
C1': (29.659,175.338,74.572)
O4': (28.599,175.483,75.506)
C5': (27.994,176.937,77.359)
P: (26.279,178.879,76.897)
O2: (30.299,174.267,72.152)
C4': (29.098,176.154,76.693)
C2': (30.903,175.987,75.183)
O2': (31.681,174.981,75.800)
N1: (29.264,175.950,73.292)
N3: (29.276,175.860,70.922)
N4: (28.237,177.483,69.706)
C6: (28.549,177.114,73.255)
C5: (28.189,177.664,72.091)
O3': (31.172,177.315,77.227)
OP1: (32.324,179.053,78.633)
OP2: (30.821,179.719,76.659)
C3': (34.339,178.661,73.729)
C1': (36.386,177.881,74.618)
C5': (33.717,179.903,75.856)
O4': (35.831,178.818,75.523)
C8: (35.501,176.155,76.264)
O2': (36.437,178.816,72.418)
C6: (37.247,173.193,75.536)
C5: (36.629,174.445,75.706)
C4: (37.011,175.453,74.847)
P: (31.812,178.790,77.264)
C4': (34.786,179.566,74.862)
C2': (35.652,178.020,73.281)
C2: (38.423,174.145,73.793)
N1: (38.159,173.076,74.551)
N3: (37.910,175.369,73.855)
N6: (36.979,172.121,76.287)
N7: (35.668,174.901,76.598)
N9: (36.291,176.557,75.220)
O5': (33.061,178.711,76.286)
O3': (33.688,179.421,72.717)
OP2: (30.821,179.719,76.659)
C3': (34.339,178.661,73.729)
C1': (36.386,177.881,74.618)
C5': (33.717,179.903,75.856)
O4': (35.831,178.818,75.523)
C8: (35.501,176.155,76.264)
O2': (36.437,178.816,72.418)
C6: (37.247,173.193,75.536)
C5: (36.629,174.445,75.706)
C4: (37.011,175.453,74.847)
P: (31.812,178.790,77.264)
C4': (34.786,179.566,74.862)
C2': (35.652,178.020,73.281)
C2: (38.423,174.145,73.793)
N1: (38.159,173.076,74.551)
N3: (37.910,175.369,73.855)
N6: (36.979,172.121,76.287)
N7: (35.668,174.901,76.598)
N9: (36.291,176.557,75.220)
O5': (33.061,178.711,76.286)
O3': (33.688,179.421,72.717)
Image (generated by PyMOL):