Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y58:Y59
Extra
PDB:
ATOM 1 O3' A A 57 4.127 29.091 50.249 1.00 30.43 O
ATOM 2 P U A 58 3.196 28.925 48.957 1.00 30.05 P
ATOM 3 OP1 U A 58 3.452 30.077 48.064 1.00 30.05 O
ATOM 4 OP2 U A 58 1.818 28.632 49.412 1.00 29.80 O
ATOM 5 O5' U A 58 3.762 27.598 48.266 1.00 29.58 O
ATOM 6 C5' U A 58 5.011 27.615 47.591 1.00 28.98 C
ATOM 7 C4' U A 58 5.389 26.210 47.165 1.00 28.65 C
ATOM 8 O4' U A 58 5.314 25.308 48.299 1.00 28.41 O
ATOM 9 C3' U A 58 4.451 25.589 46.146 1.00 28.48 C
ATOM 10 O3' U A 58 4.785 26.032 44.841 1.00 29.01 O
ATOM 11 C2' U A 58 4.756 24.109 46.334 1.00 28.28 C
ATOM 12 O2' U A 58 5.938 23.719 45.664 1.00 28.65 O
ATOM 13 C1' U A 58 4.937 24.018 47.849 1.00 27.64 C
ATOM 14 N1 U A 58 3.697 23.577 48.564 1.00 26.87 N
ATOM 15 C2 U A 58 3.458 22.225 48.714 1.00 26.52 C
ATOM 16 O2 U A 58 4.215 21.364 48.306 1.00 25.32 O
ATOM 17 N3 U A 58 2.296 21.909 49.374 1.00 26.03 N
ATOM 18 C4 U A 58 1.360 22.791 49.882 1.00 26.65 C
ATOM 19 O4 U A 58 0.363 22.353 50.447 1.00 26.62 O
ATOM 20 C5 U A 58 1.672 24.185 49.683 1.00 26.45 C
ATOM 21 C6 U A 58 2.803 24.516 49.045 1.00 26.80 C
ATOM 22 P A A 59 3.629 26.267 43.763 1.00 28.93 P
ATOM 23 OP1 A A 59 4.246 26.903 42.579 1.00 29.16 O
ATOM 24 OP2 A A 59 2.492 26.925 44.447 1.00 28.86 O
ATOM 25 O5' A A 59 3.180 24.779 43.378 1.00 28.95 O
TER
ATOM 1 O3' U B 58 4.785 26.032 44.841 1.00 29.01 O
ATOM 2 P A B 59 3.629 26.267 43.763 1.00 28.93 P
ATOM 3 OP1 A B 59 4.246 26.903 42.579 1.00 29.16 O
ATOM 4 OP2 A B 59 2.492 26.925 44.447 1.00 28.86 O
ATOM 5 O5' A B 59 3.180 24.779 43.378 1.00 28.95 O
ATOM 6 C5' A B 59 2.102 24.576 42.469 1.00 28.88 C
ATOM 7 C4' A B 59 1.837 23.096 42.260 1.00 28.70 C
ATOM 8 O4' A B 59 2.749 22.581 41.256 1.00 28.56 O
ATOM 9 C3' A B 59 2.045 22.230 43.495 1.00 28.64 C
ATOM 10 O3' A B 59 0.816 22.104 44.215 1.00 28.94 O
ATOM 11 C2' A B 59 2.499 20.899 42.901 1.00 28.61 C
ATOM 12 O2' A B 59 1.410 20.089 42.502 1.00 28.38 O
ATOM 13 C1' A B 59 3.279 21.335 41.666 1.00 28.10 C
ATOM 14 N9 A B 59 4.726 21.475 41.833 1.00 27.85 N
ATOM 15 C8 A B 59 5.436 22.643 41.862 1.00 27.63 C
ATOM 16 N7 A B 59 6.730 22.477 41.996 1.00 27.58 N
ATOM 17 C5 A B 59 6.886 21.102 42.043 1.00 27.63 C
ATOM 18 C6 A B 59 8.025 20.280 42.176 1.00 27.72 C
ATOM 19 N6 A B 59 9.270 20.757 42.284 1.00 27.46 N
ATOM 20 N1 A B 59 7.835 18.944 42.192 1.00 27.44 N
ATOM 21 C2 A B 59 6.587 18.472 42.083 1.00 27.44 C
ATOM 22 N3 A B 59 5.443 19.143 41.953 1.00 27.33 N
ATOM 23 C4 A B 59 5.662 20.467 41.940 1.00 27.70 C
ATOM 24 P A B 60 0.822 22.096 45.818 1.00 28.88 P
ATOM 25 OP1 A B 60 -0.577 22.067 46.296 1.00 29.05 O
ATOM 26 OP2 A B 60 1.722 23.178 46.270 1.00 28.76 O
ATOM 27 O5' A B 60 1.517 20.694 46.151 1.00 28.47 O
TER
ATOM 2 P U A 58 3.196 28.925 48.957 1.00 30.05 P
ATOM 3 OP1 U A 58 3.452 30.077 48.064 1.00 30.05 O
ATOM 4 OP2 U A 58 1.818 28.632 49.412 1.00 29.80 O
ATOM 5 O5' U A 58 3.762 27.598 48.266 1.00 29.58 O
ATOM 6 C5' U A 58 5.011 27.615 47.591 1.00 28.98 C
ATOM 7 C4' U A 58 5.389 26.210 47.165 1.00 28.65 C
ATOM 8 O4' U A 58 5.314 25.308 48.299 1.00 28.41 O
ATOM 9 C3' U A 58 4.451 25.589 46.146 1.00 28.48 C
ATOM 10 O3' U A 58 4.785 26.032 44.841 1.00 29.01 O
ATOM 11 C2' U A 58 4.756 24.109 46.334 1.00 28.28 C
ATOM 12 O2' U A 58 5.938 23.719 45.664 1.00 28.65 O
ATOM 13 C1' U A 58 4.937 24.018 47.849 1.00 27.64 C
ATOM 14 N1 U A 58 3.697 23.577 48.564 1.00 26.87 N
ATOM 15 C2 U A 58 3.458 22.225 48.714 1.00 26.52 C
ATOM 16 O2 U A 58 4.215 21.364 48.306 1.00 25.32 O
ATOM 17 N3 U A 58 2.296 21.909 49.374 1.00 26.03 N
ATOM 18 C4 U A 58 1.360 22.791 49.882 1.00 26.65 C
ATOM 19 O4 U A 58 0.363 22.353 50.447 1.00 26.62 O
ATOM 20 C5 U A 58 1.672 24.185 49.683 1.00 26.45 C
ATOM 21 C6 U A 58 2.803 24.516 49.045 1.00 26.80 C
ATOM 22 P A A 59 3.629 26.267 43.763 1.00 28.93 P
ATOM 23 OP1 A A 59 4.246 26.903 42.579 1.00 29.16 O
ATOM 24 OP2 A A 59 2.492 26.925 44.447 1.00 28.86 O
ATOM 25 O5' A A 59 3.180 24.779 43.378 1.00 28.95 O
TER
ATOM 1 O3' U B 58 4.785 26.032 44.841 1.00 29.01 O
ATOM 2 P A B 59 3.629 26.267 43.763 1.00 28.93 P
ATOM 3 OP1 A B 59 4.246 26.903 42.579 1.00 29.16 O
ATOM 4 OP2 A B 59 2.492 26.925 44.447 1.00 28.86 O
ATOM 5 O5' A B 59 3.180 24.779 43.378 1.00 28.95 O
ATOM 6 C5' A B 59 2.102 24.576 42.469 1.00 28.88 C
ATOM 7 C4' A B 59 1.837 23.096 42.260 1.00 28.70 C
ATOM 8 O4' A B 59 2.749 22.581 41.256 1.00 28.56 O
ATOM 9 C3' A B 59 2.045 22.230 43.495 1.00 28.64 C
ATOM 10 O3' A B 59 0.816 22.104 44.215 1.00 28.94 O
ATOM 11 C2' A B 59 2.499 20.899 42.901 1.00 28.61 C
ATOM 12 O2' A B 59 1.410 20.089 42.502 1.00 28.38 O
ATOM 13 C1' A B 59 3.279 21.335 41.666 1.00 28.10 C
ATOM 14 N9 A B 59 4.726 21.475 41.833 1.00 27.85 N
ATOM 15 C8 A B 59 5.436 22.643 41.862 1.00 27.63 C
ATOM 16 N7 A B 59 6.730 22.477 41.996 1.00 27.58 N
ATOM 17 C5 A B 59 6.886 21.102 42.043 1.00 27.63 C
ATOM 18 C6 A B 59 8.025 20.280 42.176 1.00 27.72 C
ATOM 19 N6 A B 59 9.270 20.757 42.284 1.00 27.46 N
ATOM 20 N1 A B 59 7.835 18.944 42.192 1.00 27.44 N
ATOM 21 C2 A B 59 6.587 18.472 42.083 1.00 27.44 C
ATOM 22 N3 A B 59 5.443 19.143 41.953 1.00 27.33 N
ATOM 23 C4 A B 59 5.662 20.467 41.940 1.00 27.70 C
ATOM 24 P A B 60 0.822 22.096 45.818 1.00 28.88 P
ATOM 25 OP1 A B 60 -0.577 22.067 46.296 1.00 29.05 O
ATOM 26 OP2 A B 60 1.722 23.178 46.270 1.00 28.76 O
ATOM 27 O5' A B 60 1.517 20.694 46.151 1.00 28.47 O
TER
Atoms:
C4: (1.360,22.791,49.882)
N3: (2.296,21.909,49.374)
OP1: (3.452,30.077,48.064)
OP2: (1.818,28.632,49.412)
C2: (3.458,22.225,48.714)
C1': (4.937,24.018,47.849)
C3': (4.451,25.589,46.146)
O5': (3.762,27.598,48.266)
O4': (5.314,25.308,48.299)
C5': (5.011,27.615,47.591)
P: (3.196,28.925,48.957)
C4': (5.389,26.210,47.165)
C2': (4.756,24.109,46.334)
O2': (5.938,23.719,45.664)
N1: (3.697,23.577,48.564)
O4: (0.363,22.353,50.447)
O2: (4.215,21.364,48.306)
C6: (2.803,24.516,49.045)
C5: (1.672,24.185,49.683)
O3': (4.785,26.032,44.841)
N3: (2.296,21.909,49.374)
OP1: (3.452,30.077,48.064)
OP2: (1.818,28.632,49.412)
C2: (3.458,22.225,48.714)
C1': (4.937,24.018,47.849)
C3': (4.451,25.589,46.146)
O5': (3.762,27.598,48.266)
O4': (5.314,25.308,48.299)
C5': (5.011,27.615,47.591)
P: (3.196,28.925,48.957)
C4': (5.389,26.210,47.165)
C2': (4.756,24.109,46.334)
O2': (5.938,23.719,45.664)
N1: (3.697,23.577,48.564)
O4: (0.363,22.353,50.447)
O2: (4.215,21.364,48.306)
C6: (2.803,24.516,49.045)
C5: (1.672,24.185,49.683)
O3': (4.785,26.032,44.841)
OP1: (4.246,26.903,42.579)
OP2: (2.492,26.925,44.447)
C3': (2.045,22.230,43.495)
C1': (3.279,21.335,41.666)
C5': (2.102,24.576,42.469)
O4': (2.749,22.581,41.256)
C8: (5.436,22.643,41.862)
O2': (1.410,20.089,42.502)
C6: (8.025,20.280,42.176)
C5: (6.886,21.102,42.043)
C4: (5.662,20.467,41.940)
P: (3.629,26.267,43.763)
C4': (1.837,23.096,42.260)
C2': (2.499,20.899,42.901)
C2: (6.587,18.472,42.083)
N1: (7.835,18.944,42.192)
N3: (5.443,19.143,41.953)
N6: (9.270,20.757,42.284)
N7: (6.730,22.477,41.996)
N9: (4.726,21.475,41.833)
O5': (3.180,24.779,43.378)
O3': (0.816,22.104,44.215)
OP2: (2.492,26.925,44.447)
C3': (2.045,22.230,43.495)
C1': (3.279,21.335,41.666)
C5': (2.102,24.576,42.469)
O4': (2.749,22.581,41.256)
C8: (5.436,22.643,41.862)
O2': (1.410,20.089,42.502)
C6: (8.025,20.280,42.176)
C5: (6.886,21.102,42.043)
C4: (5.662,20.467,41.940)
P: (3.629,26.267,43.763)
C4': (1.837,23.096,42.260)
C2': (2.499,20.899,42.901)
C2: (6.587,18.472,42.083)
N1: (7.835,18.944,42.192)
N3: (5.443,19.143,41.953)
N6: (9.270,20.757,42.284)
N7: (6.730,22.477,41.996)
N9: (4.726,21.475,41.833)
O5': (3.180,24.779,43.378)
O3': (0.816,22.104,44.215)
Image (generated by PyMOL):