Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3K1V:A20:A16
Extra
PDB:
ATOM 1 O3' U A 19 -10.752 5.164 27.495 1.00 59.26 O
ATOM 2 P A A 20 -9.350 4.468 27.133 1.00 67.45 P
ATOM 3 OP1 A A 20 -8.849 3.772 28.345 1.00 71.80 O
ATOM 4 OP2 A A 20 -8.501 5.484 26.464 1.00 70.43 O
ATOM 5 O5' A A 20 -9.745 3.375 26.047 1.00 66.76 O
ATOM 6 C5' A A 20 -9.476 1.995 26.256 1.00 60.87 C
ATOM 7 C4' A A 20 -10.632 1.349 26.976 1.00 58.06 C
ATOM 8 O4' A A 20 -11.864 1.950 26.504 1.00 52.85 O
ATOM 9 C3' A A 20 -10.756 -0.138 26.687 1.00 57.00 C
ATOM 10 O3' A A 20 -10.691 -1.043 27.789 1.00 61.96 O
ATOM 11 C2' A A 20 -11.819 -0.286 25.605 1.00 55.45 C
ATOM 12 O2' A A 20 -12.737 -1.301 25.935 1.00 63.57 O
ATOM 13 C1' A A 20 -12.588 1.032 25.708 1.00 50.01 C
ATOM 14 N9 A A 20 -12.895 1.667 24.426 1.00 38.21 N
ATOM 15 C8 A A 20 -12.041 2.015 23.409 1.00 33.01 C
ATOM 16 N7 A A 20 -12.637 2.590 22.391 1.00 26.10 N
ATOM 17 C5 A A 20 -13.974 2.618 22.761 1.00 34.31 C
ATOM 18 C6 A A 20 -15.129 3.103 22.117 1.00 34.74 C
ATOM 19 N6 A A 20 -15.125 3.681 20.914 1.00 25.67 N
ATOM 20 N1 A A 20 -16.309 2.972 22.765 1.00 36.27 N
ATOM 21 C2 A A 20 -16.318 2.400 23.973 1.00 33.35 C
ATOM 22 N3 A A 20 -15.304 1.910 24.680 1.00 36.41 N
ATOM 23 C4 A A 20 -14.147 2.050 24.010 1.00 36.10 C
ATOM 24 P A A 21 -10.851 -2.626 27.538 1.00 62.77 P
ATOM 25 OP1 A A 21 -10.222 -3.327 28.684 1.00 71.50 O
ATOM 26 OP2 A A 21 -10.395 -2.926 26.157 1.00 66.77 O
ATOM 27 O5' A A 21 -12.428 -2.866 27.603 1.00 61.20 O
TER
ATOM 1 O3' U B 15 -23.639 -0.489 20.985 1.00 38.72 O
ATOM 2 P C B 16 -24.105 1.018 21.271 1.00 42.70 P
ATOM 3 OP1 C B 16 -25.342 0.966 22.095 1.00 50.23 O
ATOM 4 OP2 C B 16 -24.113 1.764 19.993 1.00 39.15 O
ATOM 5 O5' C B 16 -22.930 1.566 22.188 1.00 38.62 O
ATOM 6 C5' C B 16 -22.657 2.943 22.270 1.00 41.61 C
ATOM 7 C4' C B 16 -21.198 3.159 22.562 1.00 44.46 C
ATOM 8 O4' C B 16 -20.390 2.373 21.651 1.00 37.65 O
ATOM 9 C3' C B 16 -20.770 4.598 22.358 1.00 42.06 C
ATOM 10 O3' C B 16 -20.932 5.296 23.582 1.00 46.48 O
ATOM 11 C2' C B 16 -19.309 4.469 21.960 1.00 31.95 C
ATOM 12 O2' C B 16 -18.483 4.327 23.096 1.00 38.18 O
ATOM 13 C1' C B 16 -19.325 3.163 21.160 1.00 40.81 C
ATOM 14 N1 C B 16 -19.511 3.306 19.707 1.00 30.27 N
ATOM 15 C2 C B 16 -18.467 3.810 18.936 1.00 35.57 C
ATOM 16 O2 C B 16 -17.425 4.186 19.505 1.00 31.73 O
ATOM 17 N3 C B 16 -18.612 3.875 17.591 1.00 33.96 N
ATOM 18 C4 C B 16 -19.750 3.471 17.021 1.00 32.48 C
ATOM 19 N4 C B 16 -19.843 3.540 15.692 1.00 24.30 N
ATOM 20 C5 C B 16 -20.842 2.977 17.788 1.00 32.79 C
ATOM 21 C6 C B 16 -20.682 2.918 19.115 1.00 40.15 C
ATOM 22 P U B 17 -21.580 6.757 23.574 1.00 46.54 P
ATOM 23 OP1 U B 17 -21.781 7.143 24.993 1.00 45.06 O
ATOM 24 OP2 U B 17 -22.747 6.712 22.649 1.00 28.20 O
ATOM 25 O5' U B 17 -20.434 7.670 22.939 1.00 42.38 O
TER
ATOM 2 P A A 20 -9.350 4.468 27.133 1.00 67.45 P
ATOM 3 OP1 A A 20 -8.849 3.772 28.345 1.00 71.80 O
ATOM 4 OP2 A A 20 -8.501 5.484 26.464 1.00 70.43 O
ATOM 5 O5' A A 20 -9.745 3.375 26.047 1.00 66.76 O
ATOM 6 C5' A A 20 -9.476 1.995 26.256 1.00 60.87 C
ATOM 7 C4' A A 20 -10.632 1.349 26.976 1.00 58.06 C
ATOM 8 O4' A A 20 -11.864 1.950 26.504 1.00 52.85 O
ATOM 9 C3' A A 20 -10.756 -0.138 26.687 1.00 57.00 C
ATOM 10 O3' A A 20 -10.691 -1.043 27.789 1.00 61.96 O
ATOM 11 C2' A A 20 -11.819 -0.286 25.605 1.00 55.45 C
ATOM 12 O2' A A 20 -12.737 -1.301 25.935 1.00 63.57 O
ATOM 13 C1' A A 20 -12.588 1.032 25.708 1.00 50.01 C
ATOM 14 N9 A A 20 -12.895 1.667 24.426 1.00 38.21 N
ATOM 15 C8 A A 20 -12.041 2.015 23.409 1.00 33.01 C
ATOM 16 N7 A A 20 -12.637 2.590 22.391 1.00 26.10 N
ATOM 17 C5 A A 20 -13.974 2.618 22.761 1.00 34.31 C
ATOM 18 C6 A A 20 -15.129 3.103 22.117 1.00 34.74 C
ATOM 19 N6 A A 20 -15.125 3.681 20.914 1.00 25.67 N
ATOM 20 N1 A A 20 -16.309 2.972 22.765 1.00 36.27 N
ATOM 21 C2 A A 20 -16.318 2.400 23.973 1.00 33.35 C
ATOM 22 N3 A A 20 -15.304 1.910 24.680 1.00 36.41 N
ATOM 23 C4 A A 20 -14.147 2.050 24.010 1.00 36.10 C
ATOM 24 P A A 21 -10.851 -2.626 27.538 1.00 62.77 P
ATOM 25 OP1 A A 21 -10.222 -3.327 28.684 1.00 71.50 O
ATOM 26 OP2 A A 21 -10.395 -2.926 26.157 1.00 66.77 O
ATOM 27 O5' A A 21 -12.428 -2.866 27.603 1.00 61.20 O
TER
ATOM 1 O3' U B 15 -23.639 -0.489 20.985 1.00 38.72 O
ATOM 2 P C B 16 -24.105 1.018 21.271 1.00 42.70 P
ATOM 3 OP1 C B 16 -25.342 0.966 22.095 1.00 50.23 O
ATOM 4 OP2 C B 16 -24.113 1.764 19.993 1.00 39.15 O
ATOM 5 O5' C B 16 -22.930 1.566 22.188 1.00 38.62 O
ATOM 6 C5' C B 16 -22.657 2.943 22.270 1.00 41.61 C
ATOM 7 C4' C B 16 -21.198 3.159 22.562 1.00 44.46 C
ATOM 8 O4' C B 16 -20.390 2.373 21.651 1.00 37.65 O
ATOM 9 C3' C B 16 -20.770 4.598 22.358 1.00 42.06 C
ATOM 10 O3' C B 16 -20.932 5.296 23.582 1.00 46.48 O
ATOM 11 C2' C B 16 -19.309 4.469 21.960 1.00 31.95 C
ATOM 12 O2' C B 16 -18.483 4.327 23.096 1.00 38.18 O
ATOM 13 C1' C B 16 -19.325 3.163 21.160 1.00 40.81 C
ATOM 14 N1 C B 16 -19.511 3.306 19.707 1.00 30.27 N
ATOM 15 C2 C B 16 -18.467 3.810 18.936 1.00 35.57 C
ATOM 16 O2 C B 16 -17.425 4.186 19.505 1.00 31.73 O
ATOM 17 N3 C B 16 -18.612 3.875 17.591 1.00 33.96 N
ATOM 18 C4 C B 16 -19.750 3.471 17.021 1.00 32.48 C
ATOM 19 N4 C B 16 -19.843 3.540 15.692 1.00 24.30 N
ATOM 20 C5 C B 16 -20.842 2.977 17.788 1.00 32.79 C
ATOM 21 C6 C B 16 -20.682 2.918 19.115 1.00 40.15 C
ATOM 22 P U B 17 -21.580 6.757 23.574 1.00 46.54 P
ATOM 23 OP1 U B 17 -21.781 7.143 24.993 1.00 45.06 O
ATOM 24 OP2 U B 17 -22.747 6.712 22.649 1.00 28.20 O
ATOM 25 O5' U B 17 -20.434 7.670 22.939 1.00 42.38 O
TER
Atoms:
OP1: (-8.849,3.772,28.345)
OP2: (-8.501,5.484,26.464)
C3': (-10.756,-0.138,26.687)
C1': (-12.588,1.032,25.708)
C5': (-9.476,1.995,26.256)
O4': (-11.864,1.950,26.504)
C8: (-12.041,2.015,23.409)
O2': (-12.737,-1.301,25.935)
C6: (-15.129,3.103,22.117)
C5: (-13.974,2.618,22.761)
C4: (-14.147,2.050,24.010)
P: (-9.350,4.468,27.133)
C4': (-10.632,1.349,26.976)
C2': (-11.819,-0.286,25.605)
C2: (-16.318,2.400,23.973)
N1: (-16.309,2.972,22.765)
N3: (-15.304,1.910,24.680)
N6: (-15.125,3.681,20.914)
N7: (-12.637,2.590,22.391)
N9: (-12.895,1.667,24.426)
O5': (-9.745,3.375,26.047)
O3': (-10.691,-1.043,27.789)
OP2: (-8.501,5.484,26.464)
C3': (-10.756,-0.138,26.687)
C1': (-12.588,1.032,25.708)
C5': (-9.476,1.995,26.256)
O4': (-11.864,1.950,26.504)
C8: (-12.041,2.015,23.409)
O2': (-12.737,-1.301,25.935)
C6: (-15.129,3.103,22.117)
C5: (-13.974,2.618,22.761)
C4: (-14.147,2.050,24.010)
P: (-9.350,4.468,27.133)
C4': (-10.632,1.349,26.976)
C2': (-11.819,-0.286,25.605)
C2: (-16.318,2.400,23.973)
N1: (-16.309,2.972,22.765)
N3: (-15.304,1.910,24.680)
N6: (-15.125,3.681,20.914)
N7: (-12.637,2.590,22.391)
N9: (-12.895,1.667,24.426)
O5': (-9.745,3.375,26.047)
O3': (-10.691,-1.043,27.789)
C2: (-18.467,3.810,18.936)
OP1: (-25.342,0.966,22.095)
OP2: (-24.113,1.764,19.993)
C4: (-19.750,3.471,17.021)
O5': (-22.930,1.566,22.188)
C3': (-20.770,4.598,22.358)
C1': (-19.325,3.163,21.160)
O4': (-20.390,2.373,21.651)
C5': (-22.657,2.943,22.270)
P: (-24.105,1.018,21.271)
O2: (-17.425,4.186,19.505)
C4': (-21.198,3.159,22.562)
C2': (-19.309,4.469,21.960)
O2': (-18.483,4.327,23.096)
N1: (-19.511,3.306,19.707)
N3: (-18.612,3.875,17.591)
N4: (-19.843,3.540,15.692)
C6: (-20.682,2.918,19.115)
C5: (-20.842,2.977,17.788)
O3': (-20.932,5.296,23.582)
OP1: (-25.342,0.966,22.095)
OP2: (-24.113,1.764,19.993)
C4: (-19.750,3.471,17.021)
O5': (-22.930,1.566,22.188)
C3': (-20.770,4.598,22.358)
C1': (-19.325,3.163,21.160)
O4': (-20.390,2.373,21.651)
C5': (-22.657,2.943,22.270)
P: (-24.105,1.018,21.271)
O2: (-17.425,4.186,19.505)
C4': (-21.198,3.159,22.562)
C2': (-19.309,4.469,21.960)
O2': (-18.483,4.327,23.096)
N1: (-19.511,3.306,19.707)
N3: (-18.612,3.875,17.591)
N4: (-19.843,3.540,15.692)
C6: (-20.682,2.918,19.115)
C5: (-20.842,2.977,17.788)
O3': (-20.932,5.296,23.582)
Image (generated by PyMOL):