ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A495:A508

Extra

PDB:
ATOM 1 O3' U A 494 191.276 91.393 19.522 1.00 70.59 O
ATOM 2 P G A 495 192.799 91.679 19.086 1.00 70.01 P
ATOM 3 OP1 G A 495 193.395 90.365 18.687 1.00 70.21 O
ATOM 4 OP2 G A 495 193.405 92.477 20.172 1.00 70.26 O
ATOM 5 O5' G A 495 192.709 92.581 17.777 1.00 68.69 O
ATOM 6 C5' G A 495 192.168 92.060 16.553 1.00 67.76 C
ATOM 7 C4' G A 495 191.947 93.179 15.566 1.00 67.40 C
ATOM 8 O4' G A 495 191.254 94.252 16.254 1.00 68.74 O
ATOM 9 C3' G A 495 193.195 93.799 14.948 1.00 66.87 C
ATOM 10 O3' G A 495 192.886 94.199 13.620 1.00 64.65 O
ATOM 11 C2' G A 495 193.424 95.051 15.788 1.00 68.31 C
ATOM 12 O2' G A 495 194.057 96.081 15.052 1.00 69.08 O
ATOM 13 C1' G A 495 191.994 95.450 16.151 1.00 69.25 C
ATOM 14 N9 G A 495 191.861 96.166 17.417 1.00 70.97 N
ATOM 15 C8 G A 495 192.373 95.802 18.641 1.00 71.80 C
ATOM 16 N7 G A 495 192.056 96.635 19.597 1.00 72.73 N
ATOM 17 C5 G A 495 191.295 97.609 18.965 1.00 73.14 C
ATOM 18 C6 G A 495 190.662 98.768 19.490 1.00 73.42 C
ATOM 19 O6 G A 495 190.644 99.177 20.656 1.00 73.83 O
ATOM 20 N1 G A 495 189.993 99.477 18.501 1.00 73.75 N
ATOM 21 C2 G A 495 189.932 99.122 17.178 1.00 74.08 C
ATOM 22 N2 G A 495 189.234 99.944 16.377 1.00 75.13 N
ATOM 23 N3 G A 495 190.512 98.044 16.674 1.00 73.49 N
ATOM 24 C4 G A 495 191.172 97.339 17.618 1.00 72.59 C
ATOM 25 P C A 496 193.405 93.327 12.377 1.00 64.19 P
ATOM 26 OP1 C A 496 194.168 92.156 12.913 1.00 63.64 O
ATOM 27 OP2 C A 496 194.048 94.245 11.397 1.00 63.05 O
ATOM 28 O5' C A 496 192.063 92.736 11.745 1.00 63.27 O
TER

ATOM 1 O3' G B 507 187.770 98.976 13.153 1.00 58.71 O
ATOM 2 P G B 508 189.037 99.658 12.427 1.00 61.21 P
ATOM 3 OP1 G B 508 189.931 100.163 13.507 1.00 60.80 O
ATOM 4 OP2 G B 508 188.548 100.591 11.382 1.00 60.24 O
ATOM 5 O5' G B 508 189.775 98.448 11.711 1.00 64.72 O
ATOM 6 C5' G B 508 190.490 97.455 12.467 1.00 69.80 C
ATOM 7 C4' G B 508 191.869 97.241 11.880 1.00 74.15 C
ATOM 8 O4' G B 508 191.751 96.818 10.504 1.00 75.73 O
ATOM 9 C3' G B 508 192.778 98.462 11.839 1.00 76.76 C
ATOM 10 O3' G B 508 193.480 98.552 13.071 1.00 79.42 O
ATOM 11 C2' G B 508 193.725 98.165 10.680 1.00 77.25 C
ATOM 12 O2' G B 508 194.868 97.433 11.085 1.00 78.39 O
ATOM 13 C1' G B 508 192.847 97.313 9.760 1.00 77.44 C
ATOM 14 N9 G B 508 192.326 97.995 8.583 1.00 78.74 N
ATOM 15 C8 G B 508 191.630 99.179 8.539 1.00 79.33 C
ATOM 16 N7 G B 508 191.281 99.520 7.329 1.00 80.97 N
ATOM 17 C5 G B 508 191.780 98.501 6.526 1.00 81.54 C
ATOM 18 C6 G B 508 191.712 98.318 5.113 1.00 82.95 C
ATOM 19 O6 G B 508 191.172 99.043 4.266 1.00 84.88 O
ATOM 20 N1 G B 508 192.358 97.149 4.716 1.00 82.70 N
ATOM 21 C2 G B 508 192.986 96.268 5.564 1.00 82.49 C
ATOM 22 N2 G B 508 193.560 95.198 4.991 1.00 82.03 N
ATOM 23 N3 G B 508 193.048 96.424 6.879 1.00 81.83 N
ATOM 24 C4 G B 508 192.430 97.555 7.286 1.00 80.46 C
ATOM 25 P U B 509 194.647 99.637 13.260 1.00 81.62 P
ATOM 26 OP1 U B 509 194.496 100.693 12.203 1.00 81.16 O
ATOM 27 OP2 U B 509 195.911 98.870 13.371 1.00 82.06 O
ATOM 28 O5' U B 509 194.306 100.283 14.663 1.00 81.89 O
TER

Atoms:
OP1: (193.395,90.365,18.687)
OP2: (193.405,92.477,20.172)
C3': (193.195,93.799,14.948)
C1': (191.994,95.450,16.151)
C5': (192.168,92.060,16.553)
O6: (190.644,99.177,20.656)
O4': (191.254,94.252,16.254)
C8: (192.373,95.802,18.641)
C2: (189.932,99.122,17.178)
C6: (190.662,98.768,19.490)
C5: (191.295,97.609,18.965)
C4: (191.172,97.339,17.618)
P: (192.799,91.679,19.086)
C4': (191.947,93.179,15.566)
C2': (193.424,95.051,15.788)
O2': (194.057,96.081,15.052)
N1: (189.993,99.477,18.501)
N2: (189.234,99.944,16.377)
N3: (190.512,98.044,16.674)
N7: (192.056,96.635,19.597)
N9: (191.861,96.166,17.417)
O5': (192.709,92.581,17.777)
O3': (192.886,94.199,13.620)
OP1: (189.931,100.163,13.507)
OP2: (188.548,100.591,11.382)
C3': (192.778,98.462,11.839)
C1': (192.847,97.313,9.760)
C5': (190.490,97.455,12.467)
O6: (191.172,99.043,4.266)
O4': (191.751,96.818,10.504)
C8: (191.630,99.179,8.539)
C2: (192.986,96.268,5.564)
C6: (191.712,98.318,5.113)
C5: (191.780,98.501,6.526)
C4: (192.430,97.555,7.286)
P: (189.037,99.658,12.427)
C4': (191.869,97.241,11.880)
C2': (193.725,98.165,10.680)
O2': (194.868,97.433,11.085)
N1: (192.358,97.149,4.716)
N2: (193.560,95.198,4.991)
N3: (193.048,96.424,6.879)
N7: (191.281,99.520,7.329)
N9: (192.326,97.995,8.583)
O5': (189.775,98.448,11.711)
O3': (193.480,98.552,13.071)
Image (generated by PyMOL):
PyMOL image
show in jmol