Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01190:02339
Extra
PDB:
ATOM 1 O3' A A1189 52.122 108.309 135.598 1.00 42.63 O
ATOM 2 P A A1190 52.518 109.829 135.965 1.00 44.79 P
ATOM 3 OP1 A A1190 52.904 109.933 137.390 1.00 44.68 O
ATOM 4 OP2 A A1190 51.421 110.674 135.454 1.00 46.17 O
ATOM 5 O5' A A1190 53.821 110.120 135.092 1.00 44.54 O
ATOM 6 C5' A A1190 53.734 110.353 133.666 1.00 43.42 C
ATOM 7 C4' A A1190 54.757 111.383 133.248 1.00 43.09 C
ATOM 8 O4' A A1190 56.083 110.808 133.328 1.00 42.26 O
ATOM 9 C3' A A1190 54.714 111.850 131.804 1.00 42.66 C
ATOM 10 O3' A A1190 53.654 112.795 131.622 1.00 43.32 O
ATOM 11 C2' A A1190 56.095 112.494 131.659 1.00 41.90 C
ATOM 12 O2' A A1190 56.180 113.762 132.266 1.00 40.40 O
ATOM 13 C1' A A1190 56.957 111.564 132.511 1.00 42.90 C
ATOM 14 N9 A A1190 57.827 110.646 131.775 1.00 45.51 N
ATOM 15 C8 A A1190 57.548 109.891 130.661 1.00 45.77 C
ATOM 16 N7 A A1190 58.548 109.139 130.269 1.00 45.15 N
ATOM 17 C5 A A1190 59.555 109.421 131.182 1.00 46.60 C
ATOM 18 C6 A A1190 60.867 108.935 131.329 1.00 45.77 C
ATOM 19 N6 A A1190 61.419 108.021 130.529 1.00 43.78 N
ATOM 20 N1 A A1190 61.604 109.425 132.347 1.00 45.34 N
ATOM 21 C2 A A1190 61.056 110.332 133.155 1.00 44.92 C
ATOM 22 N3 A A1190 59.839 110.862 133.126 1.00 45.16 N
ATOM 23 C4 A A1190 59.128 110.358 132.105 1.00 46.09 C
ATOM 24 P A A1191 52.894 112.906 130.204 1.00 43.40 P
ATOM 25 OP1 A A1191 51.635 113.669 130.441 1.00 41.41 O
ATOM 26 OP2 A A1191 52.829 111.572 129.571 1.00 43.59 O
ATOM 27 O5' A A1191 53.844 113.838 129.334 1.00 41.82 O
TER
ATOM 1 O3' A B2338 70.165 110.119 129.630 1.00 51.98 O
ATOM 2 P C B2339 70.439 109.339 131.007 1.00 53.49 P
ATOM 3 OP1 C B2339 71.118 110.324 131.885 1.00 53.62 O
ATOM 4 OP2 C B2339 71.093 108.037 130.716 1.00 52.25 O
ATOM 5 O5' C B2339 68.981 109.058 131.584 1.00 50.03 O
ATOM 6 C5' C B2339 68.139 110.151 131.972 1.00 48.90 C
ATOM 7 C4' C B2339 66.722 109.685 132.222 1.00 47.95 C
ATOM 8 O4' C B2339 66.134 109.194 130.995 1.00 48.08 O
ATOM 9 C3' C B2339 66.509 108.530 133.182 1.00 46.65 C
ATOM 10 O3' C B2339 66.605 108.934 134.534 1.00 48.76 O
ATOM 11 C2' C B2339 65.097 108.111 132.820 1.00 43.89 C
ATOM 12 O2' C B2339 64.141 109.042 133.268 1.00 43.79 O
ATOM 13 C1' C B2339 65.160 108.210 131.305 1.00 43.98 C
ATOM 14 N1 C B2339 65.573 106.932 130.721 1.00 42.83 N
ATOM 15 C2 C B2339 64.605 105.956 130.542 1.00 43.63 C
ATOM 16 O2 C B2339 63.435 106.214 130.859 1.00 45.07 O
ATOM 17 N3 C B2339 64.957 104.761 130.027 1.00 43.55 N
ATOM 18 C4 C B2339 66.222 104.533 129.683 1.00 43.10 C
ATOM 19 N4 C B2339 66.517 103.344 129.168 1.00 44.32 N
ATOM 20 C5 C B2339 67.237 105.517 129.847 1.00 42.25 C
ATOM 21 C6 C B2339 66.872 106.692 130.366 1.00 42.01 C
ATOM 22 P U B2340 66.872 107.838 135.678 1.00 49.05 P
ATOM 23 OP1 U B2340 66.978 108.659 136.908 1.00 48.96 O
ATOM 24 OP2 U B2340 67.981 106.932 135.294 1.00 47.12 O
ATOM 25 O5' U B2340 65.531 106.980 135.727 1.00 46.64 O
TER
ATOM 2 P A A1190 52.518 109.829 135.965 1.00 44.79 P
ATOM 3 OP1 A A1190 52.904 109.933 137.390 1.00 44.68 O
ATOM 4 OP2 A A1190 51.421 110.674 135.454 1.00 46.17 O
ATOM 5 O5' A A1190 53.821 110.120 135.092 1.00 44.54 O
ATOM 6 C5' A A1190 53.734 110.353 133.666 1.00 43.42 C
ATOM 7 C4' A A1190 54.757 111.383 133.248 1.00 43.09 C
ATOM 8 O4' A A1190 56.083 110.808 133.328 1.00 42.26 O
ATOM 9 C3' A A1190 54.714 111.850 131.804 1.00 42.66 C
ATOM 10 O3' A A1190 53.654 112.795 131.622 1.00 43.32 O
ATOM 11 C2' A A1190 56.095 112.494 131.659 1.00 41.90 C
ATOM 12 O2' A A1190 56.180 113.762 132.266 1.00 40.40 O
ATOM 13 C1' A A1190 56.957 111.564 132.511 1.00 42.90 C
ATOM 14 N9 A A1190 57.827 110.646 131.775 1.00 45.51 N
ATOM 15 C8 A A1190 57.548 109.891 130.661 1.00 45.77 C
ATOM 16 N7 A A1190 58.548 109.139 130.269 1.00 45.15 N
ATOM 17 C5 A A1190 59.555 109.421 131.182 1.00 46.60 C
ATOM 18 C6 A A1190 60.867 108.935 131.329 1.00 45.77 C
ATOM 19 N6 A A1190 61.419 108.021 130.529 1.00 43.78 N
ATOM 20 N1 A A1190 61.604 109.425 132.347 1.00 45.34 N
ATOM 21 C2 A A1190 61.056 110.332 133.155 1.00 44.92 C
ATOM 22 N3 A A1190 59.839 110.862 133.126 1.00 45.16 N
ATOM 23 C4 A A1190 59.128 110.358 132.105 1.00 46.09 C
ATOM 24 P A A1191 52.894 112.906 130.204 1.00 43.40 P
ATOM 25 OP1 A A1191 51.635 113.669 130.441 1.00 41.41 O
ATOM 26 OP2 A A1191 52.829 111.572 129.571 1.00 43.59 O
ATOM 27 O5' A A1191 53.844 113.838 129.334 1.00 41.82 O
TER
ATOM 1 O3' A B2338 70.165 110.119 129.630 1.00 51.98 O
ATOM 2 P C B2339 70.439 109.339 131.007 1.00 53.49 P
ATOM 3 OP1 C B2339 71.118 110.324 131.885 1.00 53.62 O
ATOM 4 OP2 C B2339 71.093 108.037 130.716 1.00 52.25 O
ATOM 5 O5' C B2339 68.981 109.058 131.584 1.00 50.03 O
ATOM 6 C5' C B2339 68.139 110.151 131.972 1.00 48.90 C
ATOM 7 C4' C B2339 66.722 109.685 132.222 1.00 47.95 C
ATOM 8 O4' C B2339 66.134 109.194 130.995 1.00 48.08 O
ATOM 9 C3' C B2339 66.509 108.530 133.182 1.00 46.65 C
ATOM 10 O3' C B2339 66.605 108.934 134.534 1.00 48.76 O
ATOM 11 C2' C B2339 65.097 108.111 132.820 1.00 43.89 C
ATOM 12 O2' C B2339 64.141 109.042 133.268 1.00 43.79 O
ATOM 13 C1' C B2339 65.160 108.210 131.305 1.00 43.98 C
ATOM 14 N1 C B2339 65.573 106.932 130.721 1.00 42.83 N
ATOM 15 C2 C B2339 64.605 105.956 130.542 1.00 43.63 C
ATOM 16 O2 C B2339 63.435 106.214 130.859 1.00 45.07 O
ATOM 17 N3 C B2339 64.957 104.761 130.027 1.00 43.55 N
ATOM 18 C4 C B2339 66.222 104.533 129.683 1.00 43.10 C
ATOM 19 N4 C B2339 66.517 103.344 129.168 1.00 44.32 N
ATOM 20 C5 C B2339 67.237 105.517 129.847 1.00 42.25 C
ATOM 21 C6 C B2339 66.872 106.692 130.366 1.00 42.01 C
ATOM 22 P U B2340 66.872 107.838 135.678 1.00 49.05 P
ATOM 23 OP1 U B2340 66.978 108.659 136.908 1.00 48.96 O
ATOM 24 OP2 U B2340 67.981 106.932 135.294 1.00 47.12 O
ATOM 25 O5' U B2340 65.531 106.980 135.727 1.00 46.64 O
TER
Atoms:
OP1: (52.904,109.933,137.390)
OP2: (51.421,110.674,135.454)
C3': (54.714,111.850,131.804)
C1': (56.957,111.564,132.511)
C5': (53.734,110.353,133.666)
O4': (56.083,110.808,133.328)
C8: (57.548,109.891,130.661)
O2': (56.180,113.762,132.266)
C6: (60.867,108.935,131.329)
C5: (59.555,109.421,131.182)
C4: (59.128,110.358,132.105)
P: (52.518,109.829,135.965)
C4': (54.757,111.383,133.248)
C2': (56.095,112.494,131.659)
C2: (61.056,110.332,133.155)
N1: (61.604,109.425,132.347)
N3: (59.839,110.862,133.126)
N6: (61.419,108.021,130.529)
N7: (58.548,109.139,130.269)
N9: (57.827,110.646,131.775)
O5': (53.821,110.120,135.092)
O3': (53.654,112.795,131.622)
OP2: (51.421,110.674,135.454)
C3': (54.714,111.850,131.804)
C1': (56.957,111.564,132.511)
C5': (53.734,110.353,133.666)
O4': (56.083,110.808,133.328)
C8: (57.548,109.891,130.661)
O2': (56.180,113.762,132.266)
C6: (60.867,108.935,131.329)
C5: (59.555,109.421,131.182)
C4: (59.128,110.358,132.105)
P: (52.518,109.829,135.965)
C4': (54.757,111.383,133.248)
C2': (56.095,112.494,131.659)
C2: (61.056,110.332,133.155)
N1: (61.604,109.425,132.347)
N3: (59.839,110.862,133.126)
N6: (61.419,108.021,130.529)
N7: (58.548,109.139,130.269)
N9: (57.827,110.646,131.775)
O5': (53.821,110.120,135.092)
O3': (53.654,112.795,131.622)
C2: (64.605,105.956,130.542)
OP1: (71.118,110.324,131.885)
OP2: (71.093,108.037,130.716)
C4: (66.222,104.533,129.683)
O5': (68.981,109.058,131.584)
C3': (66.509,108.530,133.182)
C1': (65.160,108.210,131.305)
O4': (66.134,109.194,130.995)
C5': (68.139,110.151,131.972)
P: (70.439,109.339,131.007)
O2: (63.435,106.214,130.859)
C4': (66.722,109.685,132.222)
C2': (65.097,108.111,132.820)
O2': (64.141,109.042,133.268)
N1: (65.573,106.932,130.721)
N3: (64.957,104.761,130.027)
N4: (66.517,103.344,129.168)
C6: (66.872,106.692,130.366)
C5: (67.237,105.517,129.847)
O3': (66.605,108.934,134.534)
OP1: (71.118,110.324,131.885)
OP2: (71.093,108.037,130.716)
C4: (66.222,104.533,129.683)
O5': (68.981,109.058,131.584)
C3': (66.509,108.530,133.182)
C1': (65.160,108.210,131.305)
O4': (66.134,109.194,130.995)
C5': (68.139,110.151,131.972)
P: (70.439,109.339,131.007)
O2: (63.435,106.214,130.859)
C4': (66.722,109.685,132.222)
C2': (65.097,108.111,132.820)
O2': (64.141,109.042,133.268)
N1: (65.573,106.932,130.721)
N3: (64.957,104.761,130.027)
N4: (66.517,103.344,129.168)
C6: (66.872,106.692,130.366)
C5: (67.237,105.517,129.847)
O3': (66.605,108.934,134.534)
Image (generated by PyMOL):