ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:01083:01042

Extra

PDB:
ATOM 1 O3' A A1082 36.458 100.788 120.977 1.00 49.64 O
ATOM 2 P A A1083 35.371 100.038 120.068 1.00 52.10 P
ATOM 3 OP1 A A1083 35.813 100.220 118.659 1.00 50.57 O
ATOM 4 OP2 A A1083 34.000 100.458 120.474 1.00 53.22 O
ATOM 5 O5' A A1083 35.524 98.509 120.475 1.00 49.20 O
ATOM 6 C5' A A1083 36.724 97.809 120.186 1.00 44.37 C
ATOM 7 C4' A A1083 36.427 96.385 119.818 1.00 41.34 C
ATOM 8 O4' A A1083 35.149 96.264 119.151 1.00 41.50 O
ATOM 9 C3' A A1083 37.438 95.876 118.822 1.00 41.86 C
ATOM 10 O3' A A1083 38.577 95.413 119.493 1.00 39.94 O
ATOM 11 C2' A A1083 36.667 94.815 118.065 1.00 41.90 C
ATOM 12 O2' A A1083 36.579 93.634 118.826 1.00 44.94 O
ATOM 13 C1' A A1083 35.292 95.478 117.976 1.00 41.76 C
ATOM 14 N9 A A1083 35.130 96.374 116.825 1.00 40.46 N
ATOM 15 C8 A A1083 34.785 97.706 116.873 1.00 40.02 C
ATOM 16 N7 A A1083 34.665 98.267 115.695 1.00 39.22 N
ATOM 17 C5 A A1083 34.955 97.243 114.810 1.00 37.73 C
ATOM 18 C6 A A1083 34.982 97.196 113.414 1.00 37.03 C
ATOM 19 N6 A A1083 34.691 98.242 112.635 1.00 35.92 N
ATOM 20 N1 A A1083 35.318 96.025 112.834 1.00 37.70 N
ATOM 21 C2 A A1083 35.601 94.980 113.616 1.00 37.55 C
ATOM 22 N3 A A1083 35.599 94.897 114.944 1.00 39.95 N
ATOM 23 C4 A A1083 35.260 96.075 115.489 1.00 39.38 C
ATOM 24 P U A1084 39.973 96.140 119.244 1.00 39.31 P
ATOM 25 OP1 U A1084 40.982 95.501 120.132 1.00 38.39 O
ATOM 26 OP2 U A1084 39.728 97.590 119.330 1.00 36.95 O
ATOM 27 O5' U A1084 40.309 95.821 117.723 1.00 39.57 O
TER

ATOM 1 O3' A B1041 38.274 96.190 103.435 1.00 39.28 O
ATOM 2 P C B1042 38.992 95.177 104.463 1.00 39.76 P
ATOM 3 OP1 C B1042 40.465 95.284 104.357 1.00 40.22 O
ATOM 4 OP2 C B1042 38.348 93.853 104.248 1.00 40.11 O
ATOM 5 O5' C B1042 38.575 95.718 105.901 1.00 38.14 O
ATOM 6 C5' C B1042 39.024 95.031 107.083 1.00 39.79 C
ATOM 7 C4' C B1042 38.062 95.242 108.226 1.00 39.17 C
ATOM 8 O4' C B1042 38.078 96.628 108.644 1.00 40.15 O
ATOM 9 C3' C B1042 36.597 94.980 107.949 1.00 39.82 C
ATOM 10 O3' C B1042 36.286 93.600 107.967 1.00 42.47 O
ATOM 11 C2' C B1042 35.940 95.731 109.093 1.00 39.41 C
ATOM 12 O2' C B1042 36.101 95.065 110.324 1.00 38.90 O
ATOM 13 C1' C B1042 36.797 96.991 109.133 1.00 40.18 C
ATOM 14 N1 C B1042 36.249 98.068 108.286 1.00 41.66 N
ATOM 15 C2 C B1042 35.048 98.679 108.672 1.00 41.30 C
ATOM 16 O2 C B1042 34.462 98.268 109.685 1.00 43.42 O
ATOM 17 N3 C B1042 34.554 99.694 107.931 1.00 41.10 N
ATOM 18 C4 C B1042 35.202 100.100 106.838 1.00 42.27 C
ATOM 19 N4 C B1042 34.690 101.125 106.155 1.00 39.91 N
ATOM 20 C5 C B1042 36.410 99.477 106.401 1.00 41.83 C
ATOM 21 C6 C B1042 36.895 98.477 107.149 1.00 40.69 C
ATOM 22 P C B1043 35.004 93.076 107.164 1.00 39.71 P
ATOM 23 OP1 C B1043 35.037 91.596 107.174 1.00 41.76 O
ATOM 24 OP2 C B1043 34.955 93.807 105.880 1.00 41.77 O
ATOM 25 O5' C B1043 33.777 93.563 108.042 1.00 38.93 O
TER

Atoms:
OP1: (35.813,100.220,118.659)
OP2: (34.000,100.458,120.474)
C3': (37.438,95.876,118.822)
C1': (35.292,95.478,117.976)
C5': (36.724,97.809,120.186)
O4': (35.149,96.264,119.151)
C8: (34.785,97.706,116.873)
O2': (36.579,93.634,118.826)
C6: (34.982,97.196,113.414)
C5: (34.955,97.243,114.810)
C4: (35.260,96.075,115.489)
P: (35.371,100.038,120.068)
C4': (36.427,96.385,119.818)
C2': (36.667,94.815,118.065)
C2: (35.601,94.980,113.616)
N1: (35.318,96.025,112.834)
N3: (35.599,94.897,114.944)
N6: (34.691,98.242,112.635)
N7: (34.665,98.267,115.695)
N9: (35.130,96.374,116.825)
O5': (35.524,98.509,120.475)
O3': (38.577,95.413,119.493)
C2: (35.048,98.679,108.672)
OP1: (40.465,95.284,104.357)
OP2: (38.348,93.853,104.248)
C4: (35.202,100.100,106.838)
O5': (38.575,95.718,105.901)
C3': (36.597,94.980,107.949)
C1': (36.797,96.991,109.133)
O4': (38.078,96.628,108.644)
C5': (39.024,95.031,107.083)
P: (38.992,95.177,104.463)
O2: (34.462,98.268,109.685)
C4': (38.062,95.242,108.226)
C2': (35.940,95.731,109.093)
O2': (36.101,95.065,110.324)
N1: (36.249,98.068,108.286)
N3: (34.554,99.694,107.931)
N4: (34.690,101.125,106.155)
C6: (36.895,98.477,107.149)
C5: (36.410,99.477,106.401)
O3': (36.286,93.600,107.967)
Image (generated by PyMOL):
PyMOL image
show in jmol