Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B55:B56
Extra
PDB:
ATOM 1 O3' G A 54 10.049 -38.706 -5.381 1.00 61.20 O
ATOM 2 P U A 55 10.246 -37.256 -6.038 1.00 68.16 P
ATOM 3 OP1 U A 55 10.452 -37.480 -7.490 1.00 65.19 O
ATOM 4 OP2 U A 55 11.236 -36.555 -5.175 1.00 54.65 O
ATOM 5 O5' U A 55 8.842 -36.499 -5.951 1.00 69.21 O
ATOM 6 C5' U A 55 7.646 -37.030 -6.530 1.00 62.90 C
ATOM 7 C4' U A 55 6.581 -36.047 -6.104 1.00 60.71 C
ATOM 8 O4' U A 55 6.382 -36.183 -4.662 1.00 59.36 O
ATOM 9 C3' U A 55 6.986 -34.569 -6.268 1.00 60.37 C
ATOM 10 O3' U A 55 6.910 -34.094 -7.677 1.00 64.12 O
ATOM 11 C2' U A 55 5.955 -33.944 -5.330 1.00 52.24 C
ATOM 12 O2' U A 55 4.654 -34.067 -5.867 1.00 51.90 O
ATOM 13 C1' U A 55 5.971 -34.912 -4.140 1.00 55.61 C
ATOM 14 N1 U A 55 6.739 -34.390 -2.933 1.00 55.74 N
ATOM 15 C2 U A 55 6.029 -33.624 -2.027 1.00 50.29 C
ATOM 16 O2 U A 55 4.843 -33.430 -2.171 1.00 46.93 O
ATOM 17 N3 U A 55 6.747 -33.153 -0.956 1.00 45.37 N
ATOM 18 C4 U A 55 8.111 -33.345 -0.722 1.00 49.15 C
ATOM 19 O4 U A 55 8.666 -32.872 0.274 1.00 48.46 O
ATOM 20 C5 U A 55 8.800 -34.137 -1.726 1.00 50.13 C
ATOM 21 C6 U A 55 8.097 -34.620 -2.763 1.00 55.39 C
ATOM 22 P A A 56 7.539 -32.669 -8.182 1.00 72.44 P
ATOM 23 OP1 A A 56 7.236 -32.552 -9.638 1.00 64.94 O
ATOM 24 OP2 A A 56 8.897 -32.508 -7.629 1.00 62.27 O
ATOM 25 O5' A A 56 6.719 -31.431 -7.555 1.00 62.91 O
TER
ATOM 1 O3' U B 55 6.910 -34.094 -7.677 1.00 64.12 O
ATOM 2 P A B 56 7.539 -32.669 -8.182 1.00 72.44 P
ATOM 3 OP1 A B 56 7.236 -32.552 -9.638 1.00 64.94 O
ATOM 4 OP2 A B 56 8.897 -32.508 -7.629 1.00 62.27 O
ATOM 5 O5' A B 56 6.719 -31.431 -7.555 1.00 62.91 O
ATOM 6 C5' A B 56 7.284 -30.119 -7.736 1.00 61.35 C
ATOM 7 C4' A B 56 6.581 -29.060 -6.896 1.00 55.87 C
ATOM 8 O4' A B 56 5.375 -28.669 -7.577 1.00 55.89 O
ATOM 9 C3' A B 56 6.085 -29.571 -5.542 1.00 52.40 C
ATOM 10 O3' A B 56 7.092 -29.320 -4.614 1.00 52.43 O
ATOM 11 C2' A B 56 4.889 -28.682 -5.315 1.00 51.86 C
ATOM 12 O2' A B 56 5.280 -27.303 -5.337 1.00 55.86 O
ATOM 13 C1' A B 56 4.276 -28.780 -6.682 1.00 49.26 C
ATOM 14 N9 A B 56 3.392 -29.835 -7.172 1.00 48.19 N
ATOM 15 C8 A B 56 3.669 -30.834 -8.063 1.00 48.09 C
ATOM 16 N7 A B 56 2.577 -31.558 -8.323 1.00 50.01 N
ATOM 17 C5 A B 56 1.541 -30.937 -7.592 1.00 47.58 C
ATOM 18 C6 A B 56 0.153 -31.143 -7.393 1.00 46.90 C
ATOM 19 N6 A B 56 -0.553 -32.115 -7.951 1.00 45.42 N
ATOM 20 N1 A B 56 -0.541 -30.310 -6.574 1.00 40.83 N
ATOM 21 C2 A B 56 0.094 -29.349 -5.951 1.00 42.78 C
ATOM 22 N3 A B 56 1.377 -29.099 -6.049 1.00 46.23 N
ATOM 23 C4 A B 56 2.045 -29.896 -6.890 1.00 44.00 C
ATOM 24 P A B 57 7.211 -30.179 -3.260 1.00 61.57 P
ATOM 25 OP1 A B 57 8.248 -29.451 -2.464 1.00 45.84 O
ATOM 26 OP2 A B 57 7.369 -31.646 -3.580 1.00 56.26 O
ATOM 27 O5' A B 57 5.743 -29.953 -2.604 1.00 53.45 O
TER
ATOM 2 P U A 55 10.246 -37.256 -6.038 1.00 68.16 P
ATOM 3 OP1 U A 55 10.452 -37.480 -7.490 1.00 65.19 O
ATOM 4 OP2 U A 55 11.236 -36.555 -5.175 1.00 54.65 O
ATOM 5 O5' U A 55 8.842 -36.499 -5.951 1.00 69.21 O
ATOM 6 C5' U A 55 7.646 -37.030 -6.530 1.00 62.90 C
ATOM 7 C4' U A 55 6.581 -36.047 -6.104 1.00 60.71 C
ATOM 8 O4' U A 55 6.382 -36.183 -4.662 1.00 59.36 O
ATOM 9 C3' U A 55 6.986 -34.569 -6.268 1.00 60.37 C
ATOM 10 O3' U A 55 6.910 -34.094 -7.677 1.00 64.12 O
ATOM 11 C2' U A 55 5.955 -33.944 -5.330 1.00 52.24 C
ATOM 12 O2' U A 55 4.654 -34.067 -5.867 1.00 51.90 O
ATOM 13 C1' U A 55 5.971 -34.912 -4.140 1.00 55.61 C
ATOM 14 N1 U A 55 6.739 -34.390 -2.933 1.00 55.74 N
ATOM 15 C2 U A 55 6.029 -33.624 -2.027 1.00 50.29 C
ATOM 16 O2 U A 55 4.843 -33.430 -2.171 1.00 46.93 O
ATOM 17 N3 U A 55 6.747 -33.153 -0.956 1.00 45.37 N
ATOM 18 C4 U A 55 8.111 -33.345 -0.722 1.00 49.15 C
ATOM 19 O4 U A 55 8.666 -32.872 0.274 1.00 48.46 O
ATOM 20 C5 U A 55 8.800 -34.137 -1.726 1.00 50.13 C
ATOM 21 C6 U A 55 8.097 -34.620 -2.763 1.00 55.39 C
ATOM 22 P A A 56 7.539 -32.669 -8.182 1.00 72.44 P
ATOM 23 OP1 A A 56 7.236 -32.552 -9.638 1.00 64.94 O
ATOM 24 OP2 A A 56 8.897 -32.508 -7.629 1.00 62.27 O
ATOM 25 O5' A A 56 6.719 -31.431 -7.555 1.00 62.91 O
TER
ATOM 1 O3' U B 55 6.910 -34.094 -7.677 1.00 64.12 O
ATOM 2 P A B 56 7.539 -32.669 -8.182 1.00 72.44 P
ATOM 3 OP1 A B 56 7.236 -32.552 -9.638 1.00 64.94 O
ATOM 4 OP2 A B 56 8.897 -32.508 -7.629 1.00 62.27 O
ATOM 5 O5' A B 56 6.719 -31.431 -7.555 1.00 62.91 O
ATOM 6 C5' A B 56 7.284 -30.119 -7.736 1.00 61.35 C
ATOM 7 C4' A B 56 6.581 -29.060 -6.896 1.00 55.87 C
ATOM 8 O4' A B 56 5.375 -28.669 -7.577 1.00 55.89 O
ATOM 9 C3' A B 56 6.085 -29.571 -5.542 1.00 52.40 C
ATOM 10 O3' A B 56 7.092 -29.320 -4.614 1.00 52.43 O
ATOM 11 C2' A B 56 4.889 -28.682 -5.315 1.00 51.86 C
ATOM 12 O2' A B 56 5.280 -27.303 -5.337 1.00 55.86 O
ATOM 13 C1' A B 56 4.276 -28.780 -6.682 1.00 49.26 C
ATOM 14 N9 A B 56 3.392 -29.835 -7.172 1.00 48.19 N
ATOM 15 C8 A B 56 3.669 -30.834 -8.063 1.00 48.09 C
ATOM 16 N7 A B 56 2.577 -31.558 -8.323 1.00 50.01 N
ATOM 17 C5 A B 56 1.541 -30.937 -7.592 1.00 47.58 C
ATOM 18 C6 A B 56 0.153 -31.143 -7.393 1.00 46.90 C
ATOM 19 N6 A B 56 -0.553 -32.115 -7.951 1.00 45.42 N
ATOM 20 N1 A B 56 -0.541 -30.310 -6.574 1.00 40.83 N
ATOM 21 C2 A B 56 0.094 -29.349 -5.951 1.00 42.78 C
ATOM 22 N3 A B 56 1.377 -29.099 -6.049 1.00 46.23 N
ATOM 23 C4 A B 56 2.045 -29.896 -6.890 1.00 44.00 C
ATOM 24 P A B 57 7.211 -30.179 -3.260 1.00 61.57 P
ATOM 25 OP1 A B 57 8.248 -29.451 -2.464 1.00 45.84 O
ATOM 26 OP2 A B 57 7.369 -31.646 -3.580 1.00 56.26 O
ATOM 27 O5' A B 57 5.743 -29.953 -2.604 1.00 53.45 O
TER
Atoms:
C4: (8.111,-33.345,-0.722)
N3: (6.747,-33.153,-0.956)
OP1: (10.452,-37.480,-7.490)
OP2: (11.236,-36.555,-5.175)
C2: (6.029,-33.624,-2.027)
C1': (5.971,-34.912,-4.140)
C3': (6.986,-34.569,-6.268)
O5': (8.842,-36.499,-5.951)
O4': (6.382,-36.183,-4.662)
C5': (7.646,-37.030,-6.530)
P: (10.246,-37.256,-6.038)
C4': (6.581,-36.047,-6.104)
C2': (5.955,-33.944,-5.330)
O2': (4.654,-34.067,-5.867)
N1: (6.739,-34.390,-2.933)
O4: (8.666,-32.872,0.274)
O2: (4.843,-33.430,-2.171)
C6: (8.097,-34.620,-2.763)
C5: (8.800,-34.137,-1.726)
O3': (6.910,-34.094,-7.677)
N3: (6.747,-33.153,-0.956)
OP1: (10.452,-37.480,-7.490)
OP2: (11.236,-36.555,-5.175)
C2: (6.029,-33.624,-2.027)
C1': (5.971,-34.912,-4.140)
C3': (6.986,-34.569,-6.268)
O5': (8.842,-36.499,-5.951)
O4': (6.382,-36.183,-4.662)
C5': (7.646,-37.030,-6.530)
P: (10.246,-37.256,-6.038)
C4': (6.581,-36.047,-6.104)
C2': (5.955,-33.944,-5.330)
O2': (4.654,-34.067,-5.867)
N1: (6.739,-34.390,-2.933)
O4: (8.666,-32.872,0.274)
O2: (4.843,-33.430,-2.171)
C6: (8.097,-34.620,-2.763)
C5: (8.800,-34.137,-1.726)
O3': (6.910,-34.094,-7.677)
OP1: (7.236,-32.552,-9.638)
OP2: (8.897,-32.508,-7.629)
C3': (6.085,-29.571,-5.542)
C1': (4.276,-28.780,-6.682)
C5': (7.284,-30.119,-7.736)
O4': (5.375,-28.669,-7.577)
C8: (3.669,-30.834,-8.063)
O2': (5.280,-27.303,-5.337)
C6: (0.153,-31.143,-7.393)
C5: (1.541,-30.937,-7.592)
C4: (2.045,-29.896,-6.890)
P: (7.539,-32.669,-8.182)
C4': (6.581,-29.060,-6.896)
C2': (4.889,-28.682,-5.315)
C2: (0.094,-29.349,-5.951)
N1: (-0.541,-30.310,-6.574)
N3: (1.377,-29.099,-6.049)
N6: (-0.553,-32.115,-7.951)
N7: (2.577,-31.558,-8.323)
N9: (3.392,-29.835,-7.172)
O5': (6.719,-31.431,-7.555)
O3': (7.092,-29.320,-4.614)
OP2: (8.897,-32.508,-7.629)
C3': (6.085,-29.571,-5.542)
C1': (4.276,-28.780,-6.682)
C5': (7.284,-30.119,-7.736)
O4': (5.375,-28.669,-7.577)
C8: (3.669,-30.834,-8.063)
O2': (5.280,-27.303,-5.337)
C6: (0.153,-31.143,-7.393)
C5: (1.541,-30.937,-7.592)
C4: (2.045,-29.896,-6.890)
P: (7.539,-32.669,-8.182)
C4': (6.581,-29.060,-6.896)
C2': (4.889,-28.682,-5.315)
C2: (0.094,-29.349,-5.951)
N1: (-0.541,-30.310,-6.574)
N3: (1.377,-29.099,-6.049)
N6: (-0.553,-32.115,-7.951)
N7: (2.577,-31.558,-8.323)
N9: (3.392,-29.835,-7.172)
O5': (6.719,-31.431,-7.555)
O3': (7.092,-29.320,-4.614)
Image (generated by PyMOL):