Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B55:B56
Extra
PDB:
ATOM 1 O3' G A 54 10.331 38.551 5.244 1.00 44.09 O
ATOM 2 P U A 55 10.796 37.105 5.744 1.00 44.94 P
ATOM 3 OP1 U A 55 11.152 37.210 7.178 1.00 48.52 O
ATOM 4 OP2 U A 55 11.778 36.573 4.773 1.00 41.98 O
ATOM 5 O5' U A 55 9.441 36.263 5.639 1.00 46.51 O
ATOM 6 C5' U A 55 8.298 36.701 6.362 1.00 44.56 C
ATOM 7 C4' U A 55 7.081 35.875 5.994 1.00 40.00 C
ATOM 8 O4' U A 55 6.756 36.070 4.595 1.00 42.36 O
ATOM 9 C3' U A 55 7.265 34.371 6.106 1.00 41.06 C
ATOM 10 O3' U A 55 7.157 33.951 7.463 1.00 45.31 O
ATOM 11 C2' U A 55 6.095 33.897 5.250 1.00 37.35 C
ATOM 12 O2' U A 55 4.852 34.023 5.912 1.00 34.51 O
ATOM 13 C1' U A 55 6.161 34.888 4.089 1.00 39.68 C
ATOM 14 N1 U A 55 6.953 34.380 2.933 1.00 38.53 N
ATOM 15 C2 U A 55 6.329 33.559 2.017 1.00 36.95 C
ATOM 16 O2 U A 55 5.160 33.236 2.110 1.00 34.39 O
ATOM 17 N3 U A 55 7.124 33.127 0.985 1.00 36.09 N
ATOM 18 C4 U A 55 8.458 33.433 0.782 1.00 39.20 C
ATOM 19 O4 U A 55 9.046 32.975 -0.193 1.00 37.57 O
ATOM 20 C5 U A 55 9.039 34.294 1.782 1.00 39.61 C
ATOM 21 C6 U A 55 8.282 34.726 2.798 1.00 38.51 C
ATOM 22 P A A 56 8.089 32.763 8.004 1.00 44.52 P
ATOM 23 OP1 A A 56 8.010 32.776 9.481 1.00 51.02 O
ATOM 24 OP2 A A 56 9.404 32.849 7.329 1.00 44.89 O
ATOM 25 O5' A A 56 7.340 31.453 7.476 1.00 41.20 O
TER
ATOM 1 O3' U B 55 7.157 33.951 7.463 1.00 45.31 O
ATOM 2 P A B 56 8.089 32.763 8.004 1.00 44.52 P
ATOM 3 OP1 A B 56 8.010 32.776 9.481 1.00 51.02 O
ATOM 4 OP2 A B 56 9.404 32.849 7.329 1.00 44.89 O
ATOM 5 O5' A B 56 7.340 31.453 7.476 1.00 41.20 O
ATOM 6 C5' A B 56 8.051 30.223 7.375 1.00 44.95 C
ATOM 7 C4' A B 56 7.168 29.144 6.775 1.00 39.76 C
ATOM 8 O4' A B 56 6.036 28.928 7.650 1.00 42.59 O
ATOM 9 C3' A B 56 6.559 29.496 5.426 1.00 40.68 C
ATOM 10 O3' A B 56 7.429 29.094 4.379 1.00 38.63 O
ATOM 11 C2' A B 56 5.273 28.677 5.412 1.00 34.55 C
ATOM 12 O2' A B 56 5.495 27.343 4.995 1.00 44.43 O
ATOM 13 C1' A B 56 4.872 28.682 6.883 1.00 42.61 C
ATOM 14 N9 A B 56 3.868 29.675 7.252 1.00 37.54 N
ATOM 15 C8 A B 56 4.047 30.763 8.058 1.00 34.89 C
ATOM 16 N7 A B 56 2.962 31.477 8.227 1.00 35.94 N
ATOM 17 C5 A B 56 2.003 30.810 7.482 1.00 33.72 C
ATOM 18 C6 A B 56 0.638 31.061 7.249 1.00 33.23 C
ATOM 19 N6 A B 56 -0.020 32.101 7.770 1.00 33.26 N
ATOM 20 N1 A B 56 -0.028 30.196 6.457 1.00 33.03 N
ATOM 21 C2 A B 56 0.632 29.157 5.936 1.00 34.49 C
ATOM 22 N3 A B 56 1.911 28.817 6.083 1.00 39.08 N
ATOM 23 C4 A B 56 2.546 29.695 6.876 1.00 35.95 C
ATOM 24 P A B 57 7.632 30.071 3.126 1.00 39.75 P
ATOM 25 OP1 A B 57 8.630 29.447 2.229 1.00 38.76 O
ATOM 26 OP2 A B 57 7.835 31.441 3.641 1.00 38.82 O
ATOM 27 O5' A B 57 6.214 29.991 2.392 1.00 36.66 O
TER
ATOM 2 P U A 55 10.796 37.105 5.744 1.00 44.94 P
ATOM 3 OP1 U A 55 11.152 37.210 7.178 1.00 48.52 O
ATOM 4 OP2 U A 55 11.778 36.573 4.773 1.00 41.98 O
ATOM 5 O5' U A 55 9.441 36.263 5.639 1.00 46.51 O
ATOM 6 C5' U A 55 8.298 36.701 6.362 1.00 44.56 C
ATOM 7 C4' U A 55 7.081 35.875 5.994 1.00 40.00 C
ATOM 8 O4' U A 55 6.756 36.070 4.595 1.00 42.36 O
ATOM 9 C3' U A 55 7.265 34.371 6.106 1.00 41.06 C
ATOM 10 O3' U A 55 7.157 33.951 7.463 1.00 45.31 O
ATOM 11 C2' U A 55 6.095 33.897 5.250 1.00 37.35 C
ATOM 12 O2' U A 55 4.852 34.023 5.912 1.00 34.51 O
ATOM 13 C1' U A 55 6.161 34.888 4.089 1.00 39.68 C
ATOM 14 N1 U A 55 6.953 34.380 2.933 1.00 38.53 N
ATOM 15 C2 U A 55 6.329 33.559 2.017 1.00 36.95 C
ATOM 16 O2 U A 55 5.160 33.236 2.110 1.00 34.39 O
ATOM 17 N3 U A 55 7.124 33.127 0.985 1.00 36.09 N
ATOM 18 C4 U A 55 8.458 33.433 0.782 1.00 39.20 C
ATOM 19 O4 U A 55 9.046 32.975 -0.193 1.00 37.57 O
ATOM 20 C5 U A 55 9.039 34.294 1.782 1.00 39.61 C
ATOM 21 C6 U A 55 8.282 34.726 2.798 1.00 38.51 C
ATOM 22 P A A 56 8.089 32.763 8.004 1.00 44.52 P
ATOM 23 OP1 A A 56 8.010 32.776 9.481 1.00 51.02 O
ATOM 24 OP2 A A 56 9.404 32.849 7.329 1.00 44.89 O
ATOM 25 O5' A A 56 7.340 31.453 7.476 1.00 41.20 O
TER
ATOM 1 O3' U B 55 7.157 33.951 7.463 1.00 45.31 O
ATOM 2 P A B 56 8.089 32.763 8.004 1.00 44.52 P
ATOM 3 OP1 A B 56 8.010 32.776 9.481 1.00 51.02 O
ATOM 4 OP2 A B 56 9.404 32.849 7.329 1.00 44.89 O
ATOM 5 O5' A B 56 7.340 31.453 7.476 1.00 41.20 O
ATOM 6 C5' A B 56 8.051 30.223 7.375 1.00 44.95 C
ATOM 7 C4' A B 56 7.168 29.144 6.775 1.00 39.76 C
ATOM 8 O4' A B 56 6.036 28.928 7.650 1.00 42.59 O
ATOM 9 C3' A B 56 6.559 29.496 5.426 1.00 40.68 C
ATOM 10 O3' A B 56 7.429 29.094 4.379 1.00 38.63 O
ATOM 11 C2' A B 56 5.273 28.677 5.412 1.00 34.55 C
ATOM 12 O2' A B 56 5.495 27.343 4.995 1.00 44.43 O
ATOM 13 C1' A B 56 4.872 28.682 6.883 1.00 42.61 C
ATOM 14 N9 A B 56 3.868 29.675 7.252 1.00 37.54 N
ATOM 15 C8 A B 56 4.047 30.763 8.058 1.00 34.89 C
ATOM 16 N7 A B 56 2.962 31.477 8.227 1.00 35.94 N
ATOM 17 C5 A B 56 2.003 30.810 7.482 1.00 33.72 C
ATOM 18 C6 A B 56 0.638 31.061 7.249 1.00 33.23 C
ATOM 19 N6 A B 56 -0.020 32.101 7.770 1.00 33.26 N
ATOM 20 N1 A B 56 -0.028 30.196 6.457 1.00 33.03 N
ATOM 21 C2 A B 56 0.632 29.157 5.936 1.00 34.49 C
ATOM 22 N3 A B 56 1.911 28.817 6.083 1.00 39.08 N
ATOM 23 C4 A B 56 2.546 29.695 6.876 1.00 35.95 C
ATOM 24 P A B 57 7.632 30.071 3.126 1.00 39.75 P
ATOM 25 OP1 A B 57 8.630 29.447 2.229 1.00 38.76 O
ATOM 26 OP2 A B 57 7.835 31.441 3.641 1.00 38.82 O
ATOM 27 O5' A B 57 6.214 29.991 2.392 1.00 36.66 O
TER
Atoms:
C4: (8.458,33.433,0.782)
N3: (7.124,33.127,0.985)
OP1: (11.152,37.210,7.178)
OP2: (11.778,36.573,4.773)
C2: (6.329,33.559,2.017)
C1': (6.161,34.888,4.089)
C3': (7.265,34.371,6.106)
O5': (9.441,36.263,5.639)
O4': (6.756,36.070,4.595)
C5': (8.298,36.701,6.362)
P: (10.796,37.105,5.744)
C4': (7.081,35.875,5.994)
C2': (6.095,33.897,5.250)
O2': (4.852,34.023,5.912)
N1: (6.953,34.380,2.933)
O4: (9.046,32.975,-0.193)
O2: (5.160,33.236,2.110)
C6: (8.282,34.726,2.798)
C5: (9.039,34.294,1.782)
O3': (7.157,33.951,7.463)
N3: (7.124,33.127,0.985)
OP1: (11.152,37.210,7.178)
OP2: (11.778,36.573,4.773)
C2: (6.329,33.559,2.017)
C1': (6.161,34.888,4.089)
C3': (7.265,34.371,6.106)
O5': (9.441,36.263,5.639)
O4': (6.756,36.070,4.595)
C5': (8.298,36.701,6.362)
P: (10.796,37.105,5.744)
C4': (7.081,35.875,5.994)
C2': (6.095,33.897,5.250)
O2': (4.852,34.023,5.912)
N1: (6.953,34.380,2.933)
O4: (9.046,32.975,-0.193)
O2: (5.160,33.236,2.110)
C6: (8.282,34.726,2.798)
C5: (9.039,34.294,1.782)
O3': (7.157,33.951,7.463)
OP1: (8.010,32.776,9.481)
OP2: (9.404,32.849,7.329)
C3': (6.559,29.496,5.426)
C1': (4.872,28.682,6.883)
C5': (8.051,30.223,7.375)
O4': (6.036,28.928,7.650)
C8: (4.047,30.763,8.058)
O2': (5.495,27.343,4.995)
C6: (0.638,31.061,7.249)
C5: (2.003,30.810,7.482)
C4: (2.546,29.695,6.876)
P: (8.089,32.763,8.004)
C4': (7.168,29.144,6.775)
C2': (5.273,28.677,5.412)
C2: (0.632,29.157,5.936)
N1: (-0.028,30.196,6.457)
N3: (1.911,28.817,6.083)
N6: (-0.020,32.101,7.770)
N7: (2.962,31.477,8.227)
N9: (3.868,29.675,7.252)
O5': (7.340,31.453,7.476)
O3': (7.429,29.094,4.379)
OP2: (9.404,32.849,7.329)
C3': (6.559,29.496,5.426)
C1': (4.872,28.682,6.883)
C5': (8.051,30.223,7.375)
O4': (6.036,28.928,7.650)
C8: (4.047,30.763,8.058)
O2': (5.495,27.343,4.995)
C6: (0.638,31.061,7.249)
C5: (2.003,30.810,7.482)
C4: (2.546,29.695,6.876)
P: (8.089,32.763,8.004)
C4': (7.168,29.144,6.775)
C2': (5.273,28.677,5.412)
C2: (0.632,29.157,5.936)
N1: (-0.028,30.196,6.457)
N3: (1.911,28.817,6.083)
N6: (-0.020,32.101,7.770)
N7: (2.962,31.477,8.227)
N9: (3.868,29.675,7.252)
O5': (7.340,31.453,7.476)
O3': (7.429,29.094,4.379)
Image (generated by PyMOL):