Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A55:A56
Extra
PDB:
ATOM 1 O3' G A 54 13.986 18.834 -27.831 1.00 52.30 O
ATOM 2 P U A 55 14.176 20.339 -28.343 1.00 45.26 P
ATOM 3 OP1 U A 55 14.777 20.276 -29.694 1.00 56.52 O
ATOM 4 OP2 U A 55 14.842 21.115 -27.273 1.00 44.94 O
ATOM 5 O5' U A 55 12.673 20.868 -28.494 1.00 45.96 O
ATOM 6 C5' U A 55 11.765 20.229 -29.385 1.00 41.00 C
ATOM 7 C4' U A 55 10.398 20.888 -29.314 1.00 43.89 C
ATOM 8 O4' U A 55 9.819 20.690 -27.999 1.00 37.87 O
ATOM 9 C3' U A 55 10.400 22.399 -29.486 1.00 41.37 C
ATOM 10 O3' U A 55 10.428 22.733 -30.864 1.00 43.38 O
ATOM 11 C2' U A 55 9.064 22.764 -28.848 1.00 39.86 C
ATOM 12 O2' U A 55 7.967 22.493 -29.698 1.00 40.19 O
ATOM 13 C1' U A 55 9.034 21.816 -27.653 1.00 37.08 C
ATOM 14 N1 U A 55 9.580 22.427 -26.411 1.00 37.61 N
ATOM 15 C2 U A 55 8.759 23.232 -25.654 1.00 35.58 C
ATOM 16 O2 U A 55 7.605 23.464 -25.956 1.00 37.82 O
ATOM 17 N3 U A 55 9.336 23.757 -24.526 1.00 35.67 N
ATOM 18 C4 U A 55 10.632 23.556 -24.092 1.00 34.29 C
ATOM 19 O4 U A 55 11.014 24.091 -23.060 1.00 33.95 O
ATOM 20 C5 U A 55 11.430 22.703 -24.936 1.00 38.22 C
ATOM 21 C6 U A 55 10.886 22.182 -26.041 1.00 37.10 C
ATOM 22 P A A 56 11.195 24.046 -31.362 1.00 45.94 P
ATOM 23 OP1 A A 56 11.047 24.085 -32.833 1.00 39.50 O
ATOM 24 OP2 A A 56 12.539 24.071 -30.745 1.00 42.58 O
ATOM 25 O5' A A 56 10.337 25.247 -30.743 1.00 38.52 O
TER
ATOM 1 O3' U B 55 10.428 22.733 -30.864 1.00 43.38 O
ATOM 2 P A B 56 11.195 24.046 -31.362 1.00 45.94 P
ATOM 3 OP1 A B 56 11.047 24.085 -32.833 1.00 39.50 O
ATOM 4 OP2 A B 56 12.539 24.071 -30.745 1.00 42.58 O
ATOM 5 O5' A B 56 10.337 25.247 -30.743 1.00 38.52 O
ATOM 6 C5' A B 56 10.818 26.584 -30.850 1.00 41.73 C
ATOM 7 C4' A B 56 9.775 27.581 -30.377 1.00 40.55 C
ATOM 8 O4' A B 56 8.720 27.693 -31.362 1.00 41.57 O
ATOM 9 C3' A B 56 9.078 27.188 -29.086 1.00 40.81 C
ATOM 10 O3' A B 56 9.798 27.715 -27.983 1.00 40.01 O
ATOM 11 C2' A B 56 7.717 27.858 -29.221 1.00 38.55 C
ATOM 12 O2' A B 56 7.757 29.205 -28.791 1.00 40.66 O
ATOM 13 C1' A B 56 7.461 27.799 -30.724 1.00 38.73 C
ATOM 14 N9 A B 56 6.639 26.682 -31.185 1.00 38.54 N
ATOM 15 C8 A B 56 7.084 25.557 -31.820 1.00 37.47 C
ATOM 16 N7 A B 56 6.129 24.718 -32.141 1.00 38.90 N
ATOM 17 C5 A B 56 4.975 25.335 -31.689 1.00 33.31 C
ATOM 18 C6 A B 56 3.620 24.953 -31.730 1.00 36.18 C
ATOM 19 N6 A B 56 3.201 23.804 -32.268 1.00 35.98 N
ATOM 20 N1 A B 56 2.714 25.794 -31.191 1.00 33.18 N
ATOM 21 C2 A B 56 3.148 26.939 -30.652 1.00 36.81 C
ATOM 22 N3 A B 56 4.392 27.407 -30.556 1.00 40.82 N
ATOM 23 C4 A B 56 5.269 26.549 -31.100 1.00 36.37 C
ATOM 24 P A B 57 9.935 26.839 -26.655 1.00 41.79 P
ATOM 25 OP1 A B 57 10.774 27.586 -25.690 1.00 32.28 O
ATOM 26 OP2 A B 57 10.297 25.462 -27.055 1.00 37.35 O
ATOM 27 O5' A B 57 8.438 26.830 -26.095 1.00 40.81 O
TER
ATOM 2 P U A 55 14.176 20.339 -28.343 1.00 45.26 P
ATOM 3 OP1 U A 55 14.777 20.276 -29.694 1.00 56.52 O
ATOM 4 OP2 U A 55 14.842 21.115 -27.273 1.00 44.94 O
ATOM 5 O5' U A 55 12.673 20.868 -28.494 1.00 45.96 O
ATOM 6 C5' U A 55 11.765 20.229 -29.385 1.00 41.00 C
ATOM 7 C4' U A 55 10.398 20.888 -29.314 1.00 43.89 C
ATOM 8 O4' U A 55 9.819 20.690 -27.999 1.00 37.87 O
ATOM 9 C3' U A 55 10.400 22.399 -29.486 1.00 41.37 C
ATOM 10 O3' U A 55 10.428 22.733 -30.864 1.00 43.38 O
ATOM 11 C2' U A 55 9.064 22.764 -28.848 1.00 39.86 C
ATOM 12 O2' U A 55 7.967 22.493 -29.698 1.00 40.19 O
ATOM 13 C1' U A 55 9.034 21.816 -27.653 1.00 37.08 C
ATOM 14 N1 U A 55 9.580 22.427 -26.411 1.00 37.61 N
ATOM 15 C2 U A 55 8.759 23.232 -25.654 1.00 35.58 C
ATOM 16 O2 U A 55 7.605 23.464 -25.956 1.00 37.82 O
ATOM 17 N3 U A 55 9.336 23.757 -24.526 1.00 35.67 N
ATOM 18 C4 U A 55 10.632 23.556 -24.092 1.00 34.29 C
ATOM 19 O4 U A 55 11.014 24.091 -23.060 1.00 33.95 O
ATOM 20 C5 U A 55 11.430 22.703 -24.936 1.00 38.22 C
ATOM 21 C6 U A 55 10.886 22.182 -26.041 1.00 37.10 C
ATOM 22 P A A 56 11.195 24.046 -31.362 1.00 45.94 P
ATOM 23 OP1 A A 56 11.047 24.085 -32.833 1.00 39.50 O
ATOM 24 OP2 A A 56 12.539 24.071 -30.745 1.00 42.58 O
ATOM 25 O5' A A 56 10.337 25.247 -30.743 1.00 38.52 O
TER
ATOM 1 O3' U B 55 10.428 22.733 -30.864 1.00 43.38 O
ATOM 2 P A B 56 11.195 24.046 -31.362 1.00 45.94 P
ATOM 3 OP1 A B 56 11.047 24.085 -32.833 1.00 39.50 O
ATOM 4 OP2 A B 56 12.539 24.071 -30.745 1.00 42.58 O
ATOM 5 O5' A B 56 10.337 25.247 -30.743 1.00 38.52 O
ATOM 6 C5' A B 56 10.818 26.584 -30.850 1.00 41.73 C
ATOM 7 C4' A B 56 9.775 27.581 -30.377 1.00 40.55 C
ATOM 8 O4' A B 56 8.720 27.693 -31.362 1.00 41.57 O
ATOM 9 C3' A B 56 9.078 27.188 -29.086 1.00 40.81 C
ATOM 10 O3' A B 56 9.798 27.715 -27.983 1.00 40.01 O
ATOM 11 C2' A B 56 7.717 27.858 -29.221 1.00 38.55 C
ATOM 12 O2' A B 56 7.757 29.205 -28.791 1.00 40.66 O
ATOM 13 C1' A B 56 7.461 27.799 -30.724 1.00 38.73 C
ATOM 14 N9 A B 56 6.639 26.682 -31.185 1.00 38.54 N
ATOM 15 C8 A B 56 7.084 25.557 -31.820 1.00 37.47 C
ATOM 16 N7 A B 56 6.129 24.718 -32.141 1.00 38.90 N
ATOM 17 C5 A B 56 4.975 25.335 -31.689 1.00 33.31 C
ATOM 18 C6 A B 56 3.620 24.953 -31.730 1.00 36.18 C
ATOM 19 N6 A B 56 3.201 23.804 -32.268 1.00 35.98 N
ATOM 20 N1 A B 56 2.714 25.794 -31.191 1.00 33.18 N
ATOM 21 C2 A B 56 3.148 26.939 -30.652 1.00 36.81 C
ATOM 22 N3 A B 56 4.392 27.407 -30.556 1.00 40.82 N
ATOM 23 C4 A B 56 5.269 26.549 -31.100 1.00 36.37 C
ATOM 24 P A B 57 9.935 26.839 -26.655 1.00 41.79 P
ATOM 25 OP1 A B 57 10.774 27.586 -25.690 1.00 32.28 O
ATOM 26 OP2 A B 57 10.297 25.462 -27.055 1.00 37.35 O
ATOM 27 O5' A B 57 8.438 26.830 -26.095 1.00 40.81 O
TER
Atoms:
C4: (10.632,23.556,-24.092)
N3: (9.336,23.757,-24.526)
OP1: (14.777,20.276,-29.694)
OP2: (14.842,21.115,-27.273)
C2: (8.759,23.232,-25.654)
C1': (9.034,21.816,-27.653)
C3': (10.400,22.399,-29.486)
O5': (12.673,20.868,-28.494)
O4': (9.819,20.690,-27.999)
C5': (11.765,20.229,-29.385)
P: (14.176,20.339,-28.343)
C4': (10.398,20.888,-29.314)
C2': (9.064,22.764,-28.848)
O2': (7.967,22.493,-29.698)
N1: (9.580,22.427,-26.411)
O4: (11.014,24.091,-23.060)
O2: (7.605,23.464,-25.956)
C6: (10.886,22.182,-26.041)
C5: (11.430,22.703,-24.936)
O3': (10.428,22.733,-30.864)
N3: (9.336,23.757,-24.526)
OP1: (14.777,20.276,-29.694)
OP2: (14.842,21.115,-27.273)
C2: (8.759,23.232,-25.654)
C1': (9.034,21.816,-27.653)
C3': (10.400,22.399,-29.486)
O5': (12.673,20.868,-28.494)
O4': (9.819,20.690,-27.999)
C5': (11.765,20.229,-29.385)
P: (14.176,20.339,-28.343)
C4': (10.398,20.888,-29.314)
C2': (9.064,22.764,-28.848)
O2': (7.967,22.493,-29.698)
N1: (9.580,22.427,-26.411)
O4: (11.014,24.091,-23.060)
O2: (7.605,23.464,-25.956)
C6: (10.886,22.182,-26.041)
C5: (11.430,22.703,-24.936)
O3': (10.428,22.733,-30.864)
OP1: (11.047,24.085,-32.833)
OP2: (12.539,24.071,-30.745)
C3': (9.078,27.188,-29.086)
C1': (7.461,27.799,-30.724)
C5': (10.818,26.584,-30.850)
O4': (8.720,27.693,-31.362)
C8: (7.084,25.557,-31.820)
O2': (7.757,29.205,-28.791)
C6: (3.620,24.953,-31.730)
C5: (4.975,25.335,-31.689)
C4: (5.269,26.549,-31.100)
P: (11.195,24.046,-31.362)
C4': (9.775,27.581,-30.377)
C2': (7.717,27.858,-29.221)
C2: (3.148,26.939,-30.652)
N1: (2.714,25.794,-31.191)
N3: (4.392,27.407,-30.556)
N6: (3.201,23.804,-32.268)
N7: (6.129,24.718,-32.141)
N9: (6.639,26.682,-31.185)
O5': (10.337,25.247,-30.743)
O3': (9.798,27.715,-27.983)
OP2: (12.539,24.071,-30.745)
C3': (9.078,27.188,-29.086)
C1': (7.461,27.799,-30.724)
C5': (10.818,26.584,-30.850)
O4': (8.720,27.693,-31.362)
C8: (7.084,25.557,-31.820)
O2': (7.757,29.205,-28.791)
C6: (3.620,24.953,-31.730)
C5: (4.975,25.335,-31.689)
C4: (5.269,26.549,-31.100)
P: (11.195,24.046,-31.362)
C4': (9.775,27.581,-30.377)
C2': (7.717,27.858,-29.221)
C2: (3.148,26.939,-30.652)
N1: (2.714,25.794,-31.191)
N3: (4.392,27.407,-30.556)
N6: (3.201,23.804,-32.268)
N7: (6.129,24.718,-32.141)
N9: (6.639,26.682,-31.185)
O5': (10.337,25.247,-30.743)
O3': (9.798,27.715,-27.983)
Image (generated by PyMOL):