Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A55:A56
Extra
PDB:
ATOM 1 O3' G A 54 13.538 -36.868 -0.579 1.00 38.66 O
ATOM 2 P U A 55 13.793 -35.376 -1.141 1.00 39.94 P
ATOM 3 OP1 U A 55 14.342 -35.525 -2.523 1.00 39.55 O
ATOM 4 OP2 U A 55 14.542 -34.570 -0.127 1.00 38.04 O
ATOM 5 O5' U A 55 12.331 -34.758 -1.247 1.00 38.38 O
ATOM 6 C5' U A 55 11.352 -35.348 -2.112 1.00 37.51 C
ATOM 7 C4' U A 55 10.032 -34.631 -1.970 1.00 37.42 C
ATOM 8 O4' U A 55 9.545 -34.780 -0.610 1.00 36.66 O
ATOM 9 C3' U A 55 10.054 -33.127 -2.192 1.00 37.48 C
ATOM 10 O3' U A 55 9.984 -32.769 -3.567 1.00 37.68 O
ATOM 11 C2' U A 55 8.824 -32.660 -1.426 1.00 37.36 C
ATOM 12 O2' U A 55 7.646 -32.816 -2.195 1.00 38.69 O
ATOM 13 C1' U A 55 8.815 -33.624 -0.236 1.00 36.04 C
ATOM 14 N1 U A 55 9.433 -33.045 0.966 1.00 34.60 N
ATOM 15 C2 U A 55 8.619 -32.315 1.829 1.00 34.35 C
ATOM 16 O2 U A 55 7.425 -32.175 1.653 1.00 35.79 O
ATOM 17 N3 U A 55 9.259 -31.767 2.912 1.00 31.94 N
ATOM 18 C4 U A 55 10.592 -31.886 3.229 1.00 32.73 C
ATOM 19 O4 U A 55 11.012 -31.384 4.272 1.00 32.36 O
ATOM 20 C5 U A 55 11.360 -32.667 2.304 1.00 33.37 C
ATOM 21 C6 U A 55 10.770 -33.205 1.232 1.00 33.26 C
ATOM 22 P A A 56 10.782 -31.473 -4.085 1.00 38.19 P
ATOM 23 OP1 A A 56 10.787 -31.508 -5.574 1.00 37.33 O
ATOM 24 OP2 A A 56 12.070 -31.400 -3.337 1.00 36.74 O
ATOM 25 O5' A A 56 9.895 -30.240 -3.594 1.00 37.43 O
TER
ATOM 1 O3' U B 55 9.984 -32.769 -3.567 1.00 37.68 O
ATOM 2 P A B 56 10.782 -31.473 -4.085 1.00 38.19 P
ATOM 3 OP1 A B 56 10.787 -31.508 -5.574 1.00 37.33 O
ATOM 4 OP2 A B 56 12.070 -31.400 -3.337 1.00 36.74 O
ATOM 5 O5' A B 56 9.895 -30.240 -3.594 1.00 37.43 O
ATOM 6 C5' A B 56 10.443 -28.905 -3.552 1.00 35.45 C
ATOM 7 C4' A B 56 9.407 -27.916 -3.061 1.00 33.17 C
ATOM 8 O4' A B 56 8.303 -27.857 -3.993 1.00 32.41 O
ATOM 9 C3' A B 56 8.776 -28.237 -1.719 1.00 32.29 C
ATOM 10 O3' A B 56 9.595 -27.721 -0.674 1.00 30.63 O
ATOM 11 C2' A B 56 7.418 -27.542 -1.805 1.00 32.23 C
ATOM 12 O2' A B 56 7.500 -26.158 -1.513 1.00 33.27 O
ATOM 13 C1' A B 56 7.089 -27.679 -3.292 1.00 31.04 C
ATOM 14 N9 A B 56 6.193 -28.772 -3.668 1.00 29.42 N
ATOM 15 C8 A B 56 6.533 -29.907 -4.361 1.00 28.06 C
ATOM 16 N7 A B 56 5.511 -30.678 -4.646 1.00 27.00 N
ATOM 17 C5 A B 56 4.427 -30.020 -4.083 1.00 26.44 C
ATOM 18 C6 A B 56 3.062 -30.324 -4.047 1.00 25.05 C
ATOM 19 N6 A B 56 2.533 -31.404 -4.621 1.00 25.24 N
ATOM 20 N1 A B 56 2.245 -29.471 -3.400 1.00 23.74 N
ATOM 21 C2 A B 56 2.775 -28.387 -2.832 1.00 25.51 C
ATOM 22 N3 A B 56 4.044 -27.984 -2.801 1.00 27.71 N
ATOM 23 C4 A B 56 4.832 -28.856 -3.456 1.00 28.30 C
ATOM 24 P A B 57 9.842 -28.601 0.648 1.00 30.01 P
ATOM 25 OP1 A B 57 10.700 -27.824 1.580 1.00 30.21 O
ATOM 26 OP2 A B 57 10.272 -29.957 0.215 1.00 30.37 O
ATOM 27 O5' A B 57 8.394 -28.702 1.297 1.00 28.79 O
TER
ATOM 2 P U A 55 13.793 -35.376 -1.141 1.00 39.94 P
ATOM 3 OP1 U A 55 14.342 -35.525 -2.523 1.00 39.55 O
ATOM 4 OP2 U A 55 14.542 -34.570 -0.127 1.00 38.04 O
ATOM 5 O5' U A 55 12.331 -34.758 -1.247 1.00 38.38 O
ATOM 6 C5' U A 55 11.352 -35.348 -2.112 1.00 37.51 C
ATOM 7 C4' U A 55 10.032 -34.631 -1.970 1.00 37.42 C
ATOM 8 O4' U A 55 9.545 -34.780 -0.610 1.00 36.66 O
ATOM 9 C3' U A 55 10.054 -33.127 -2.192 1.00 37.48 C
ATOM 10 O3' U A 55 9.984 -32.769 -3.567 1.00 37.68 O
ATOM 11 C2' U A 55 8.824 -32.660 -1.426 1.00 37.36 C
ATOM 12 O2' U A 55 7.646 -32.816 -2.195 1.00 38.69 O
ATOM 13 C1' U A 55 8.815 -33.624 -0.236 1.00 36.04 C
ATOM 14 N1 U A 55 9.433 -33.045 0.966 1.00 34.60 N
ATOM 15 C2 U A 55 8.619 -32.315 1.829 1.00 34.35 C
ATOM 16 O2 U A 55 7.425 -32.175 1.653 1.00 35.79 O
ATOM 17 N3 U A 55 9.259 -31.767 2.912 1.00 31.94 N
ATOM 18 C4 U A 55 10.592 -31.886 3.229 1.00 32.73 C
ATOM 19 O4 U A 55 11.012 -31.384 4.272 1.00 32.36 O
ATOM 20 C5 U A 55 11.360 -32.667 2.304 1.00 33.37 C
ATOM 21 C6 U A 55 10.770 -33.205 1.232 1.00 33.26 C
ATOM 22 P A A 56 10.782 -31.473 -4.085 1.00 38.19 P
ATOM 23 OP1 A A 56 10.787 -31.508 -5.574 1.00 37.33 O
ATOM 24 OP2 A A 56 12.070 -31.400 -3.337 1.00 36.74 O
ATOM 25 O5' A A 56 9.895 -30.240 -3.594 1.00 37.43 O
TER
ATOM 1 O3' U B 55 9.984 -32.769 -3.567 1.00 37.68 O
ATOM 2 P A B 56 10.782 -31.473 -4.085 1.00 38.19 P
ATOM 3 OP1 A B 56 10.787 -31.508 -5.574 1.00 37.33 O
ATOM 4 OP2 A B 56 12.070 -31.400 -3.337 1.00 36.74 O
ATOM 5 O5' A B 56 9.895 -30.240 -3.594 1.00 37.43 O
ATOM 6 C5' A B 56 10.443 -28.905 -3.552 1.00 35.45 C
ATOM 7 C4' A B 56 9.407 -27.916 -3.061 1.00 33.17 C
ATOM 8 O4' A B 56 8.303 -27.857 -3.993 1.00 32.41 O
ATOM 9 C3' A B 56 8.776 -28.237 -1.719 1.00 32.29 C
ATOM 10 O3' A B 56 9.595 -27.721 -0.674 1.00 30.63 O
ATOM 11 C2' A B 56 7.418 -27.542 -1.805 1.00 32.23 C
ATOM 12 O2' A B 56 7.500 -26.158 -1.513 1.00 33.27 O
ATOM 13 C1' A B 56 7.089 -27.679 -3.292 1.00 31.04 C
ATOM 14 N9 A B 56 6.193 -28.772 -3.668 1.00 29.42 N
ATOM 15 C8 A B 56 6.533 -29.907 -4.361 1.00 28.06 C
ATOM 16 N7 A B 56 5.511 -30.678 -4.646 1.00 27.00 N
ATOM 17 C5 A B 56 4.427 -30.020 -4.083 1.00 26.44 C
ATOM 18 C6 A B 56 3.062 -30.324 -4.047 1.00 25.05 C
ATOM 19 N6 A B 56 2.533 -31.404 -4.621 1.00 25.24 N
ATOM 20 N1 A B 56 2.245 -29.471 -3.400 1.00 23.74 N
ATOM 21 C2 A B 56 2.775 -28.387 -2.832 1.00 25.51 C
ATOM 22 N3 A B 56 4.044 -27.984 -2.801 1.00 27.71 N
ATOM 23 C4 A B 56 4.832 -28.856 -3.456 1.00 28.30 C
ATOM 24 P A B 57 9.842 -28.601 0.648 1.00 30.01 P
ATOM 25 OP1 A B 57 10.700 -27.824 1.580 1.00 30.21 O
ATOM 26 OP2 A B 57 10.272 -29.957 0.215 1.00 30.37 O
ATOM 27 O5' A B 57 8.394 -28.702 1.297 1.00 28.79 O
TER
Atoms:
C4: (10.592,-31.886,3.229)
N3: (9.259,-31.767,2.912)
OP1: (14.342,-35.525,-2.523)
OP2: (14.542,-34.570,-0.127)
C2: (8.619,-32.315,1.829)
C1': (8.815,-33.624,-0.236)
C3': (10.054,-33.127,-2.192)
O5': (12.331,-34.758,-1.247)
O4': (9.545,-34.780,-0.610)
C5': (11.352,-35.348,-2.112)
P: (13.793,-35.376,-1.141)
C4': (10.032,-34.631,-1.970)
C2': (8.824,-32.660,-1.426)
O2': (7.646,-32.816,-2.195)
N1: (9.433,-33.045,0.966)
O4: (11.012,-31.384,4.272)
O2: (7.425,-32.175,1.653)
C6: (10.770,-33.205,1.232)
C5: (11.360,-32.667,2.304)
O3': (9.984,-32.769,-3.567)
N3: (9.259,-31.767,2.912)
OP1: (14.342,-35.525,-2.523)
OP2: (14.542,-34.570,-0.127)
C2: (8.619,-32.315,1.829)
C1': (8.815,-33.624,-0.236)
C3': (10.054,-33.127,-2.192)
O5': (12.331,-34.758,-1.247)
O4': (9.545,-34.780,-0.610)
C5': (11.352,-35.348,-2.112)
P: (13.793,-35.376,-1.141)
C4': (10.032,-34.631,-1.970)
C2': (8.824,-32.660,-1.426)
O2': (7.646,-32.816,-2.195)
N1: (9.433,-33.045,0.966)
O4: (11.012,-31.384,4.272)
O2: (7.425,-32.175,1.653)
C6: (10.770,-33.205,1.232)
C5: (11.360,-32.667,2.304)
O3': (9.984,-32.769,-3.567)
OP1: (10.787,-31.508,-5.574)
OP2: (12.070,-31.400,-3.337)
C3': (8.776,-28.237,-1.719)
C1': (7.089,-27.679,-3.292)
C5': (10.443,-28.905,-3.552)
O4': (8.303,-27.857,-3.993)
C8: (6.533,-29.907,-4.361)
O2': (7.500,-26.158,-1.513)
C6: (3.062,-30.324,-4.047)
C5: (4.427,-30.020,-4.083)
C4: (4.832,-28.856,-3.456)
P: (10.782,-31.473,-4.085)
C4': (9.407,-27.916,-3.061)
C2': (7.418,-27.542,-1.805)
C2: (2.775,-28.387,-2.832)
N1: (2.245,-29.471,-3.400)
N3: (4.044,-27.984,-2.801)
N6: (2.533,-31.404,-4.621)
N7: (5.511,-30.678,-4.646)
N9: (6.193,-28.772,-3.668)
O5': (9.895,-30.240,-3.594)
O3': (9.595,-27.721,-0.674)
OP2: (12.070,-31.400,-3.337)
C3': (8.776,-28.237,-1.719)
C1': (7.089,-27.679,-3.292)
C5': (10.443,-28.905,-3.552)
O4': (8.303,-27.857,-3.993)
C8: (6.533,-29.907,-4.361)
O2': (7.500,-26.158,-1.513)
C6: (3.062,-30.324,-4.047)
C5: (4.427,-30.020,-4.083)
C4: (4.832,-28.856,-3.456)
P: (10.782,-31.473,-4.085)
C4': (9.407,-27.916,-3.061)
C2': (7.418,-27.542,-1.805)
C2: (2.775,-28.387,-2.832)
N1: (2.245,-29.471,-3.400)
N3: (4.044,-27.984,-2.801)
N6: (2.533,-31.404,-4.621)
N7: (5.511,-30.678,-4.646)
N9: (6.193,-28.772,-3.668)
O5': (9.895,-30.240,-3.594)
O3': (9.595,-27.721,-0.674)
Image (generated by PyMOL):