Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B55:B56
Extra
PDB:
ATOM 1 O3' G A 54 10.350 -16.925 33.017 1.00 38.14 O
ATOM 2 P U A 55 10.625 -18.385 33.623 1.00 39.43 P
ATOM 3 OP1 U A 55 10.804 -18.238 35.093 1.00 39.41 O
ATOM 4 OP2 U A 55 11.696 -19.024 32.802 1.00 37.73 O
ATOM 5 O5' U A 55 9.264 -19.175 33.358 1.00 38.75 O
ATOM 6 C5' U A 55 8.043 -18.759 33.995 1.00 37.47 C
ATOM 7 C4' U A 55 6.921 -19.728 33.691 1.00 36.63 C
ATOM 8 O4' U A 55 6.497 -19.608 32.305 1.00 36.04 O
ATOM 9 C3' U A 55 7.217 -21.208 33.863 1.00 36.13 C
ATOM 10 O3' U A 55 7.158 -21.620 35.222 1.00 36.37 O
ATOM 11 C2' U A 55 6.132 -21.853 33.004 1.00 35.66 C
ATOM 12 O2' U A 55 4.882 -21.909 33.671 1.00 35.80 O
ATOM 13 C1' U A 55 6.033 -20.865 31.837 1.00 34.89 C
ATOM 14 N1 U A 55 6.859 -21.284 30.692 1.00 32.63 N
ATOM 15 C2 U A 55 6.259 -22.035 29.689 1.00 30.83 C
ATOM 16 O2 U A 55 5.077 -22.314 29.679 1.00 31.16 O
ATOM 17 N3 U A 55 7.105 -22.447 28.692 1.00 30.07 N
ATOM 18 C4 U A 55 8.460 -22.185 28.586 1.00 29.76 C
ATOM 19 O4 U A 55 9.106 -22.690 27.665 1.00 28.21 O
ATOM 20 C5 U A 55 8.993 -21.378 29.636 1.00 29.72 C
ATOM 21 C6 U A 55 8.198 -20.964 30.626 1.00 31.19 C
ATOM 22 P A A 56 8.092 -22.834 35.724 1.00 36.54 P
ATOM 23 OP1 A A 56 8.170 -22.732 37.201 1.00 37.32 O
ATOM 24 OP2 A A 56 9.348 -22.840 34.914 1.00 35.84 O
ATOM 25 O5' A A 56 7.269 -24.150 35.351 1.00 35.61 O
TER
ATOM 1 O3' U B 55 7.158 -21.620 35.222 1.00 36.37 O
ATOM 2 P A B 56 8.092 -22.834 35.724 1.00 36.54 P
ATOM 3 OP1 A B 56 8.170 -22.732 37.201 1.00 37.32 O
ATOM 4 OP2 A B 56 9.348 -22.840 34.914 1.00 35.84 O
ATOM 5 O5' A B 56 7.269 -24.150 35.351 1.00 35.61 O
ATOM 6 C5' A B 56 7.912 -25.447 35.298 1.00 33.45 C
ATOM 7 C4' A B 56 7.015 -26.458 34.611 1.00 32.10 C
ATOM 8 O4' A B 56 5.816 -26.666 35.398 1.00 31.85 O
ATOM 9 C3' A B 56 6.504 -26.062 33.236 1.00 31.04 C
ATOM 10 O3' A B 56 7.449 -26.382 32.225 1.00 30.49 O
ATOM 11 C2' A B 56 5.210 -26.857 33.102 1.00 30.64 C
ATOM 12 O2' A B 56 5.417 -28.188 32.689 1.00 30.16 O
ATOM 13 C1' A B 56 4.709 -26.884 34.543 1.00 30.57 C
ATOM 14 N9 A B 56 3.691 -25.887 34.859 1.00 30.27 N
ATOM 15 C8 A B 56 3.831 -24.772 35.646 1.00 29.96 C
ATOM 16 N7 A B 56 2.718 -24.102 35.817 1.00 30.24 N
ATOM 17 C5 A B 56 1.784 -24.815 35.080 1.00 29.76 C
ATOM 18 C6 A B 56 0.407 -24.630 34.869 1.00 30.18 C
ATOM 19 N6 A B 56 -0.298 -23.632 35.415 1.00 30.75 N
ATOM 20 N1 A B 56 -0.230 -25.513 34.071 1.00 29.93 N
ATOM 21 C2 A B 56 0.478 -26.511 33.528 1.00 29.78 C
ATOM 22 N3 A B 56 1.772 -26.796 33.658 1.00 30.03 N
ATOM 23 C4 A B 56 2.374 -25.902 34.461 1.00 30.08 C
ATOM 24 P A B 57 7.541 -25.460 30.915 1.00 30.25 P
ATOM 25 OP1 A B 57 8.525 -26.039 29.956 1.00 30.17 O
ATOM 26 OP2 A B 57 7.698 -24.057 31.372 1.00 31.06 O
ATOM 27 O5' A B 57 6.092 -25.615 30.276 1.00 29.79 O
TER
ATOM 2 P U A 55 10.625 -18.385 33.623 1.00 39.43 P
ATOM 3 OP1 U A 55 10.804 -18.238 35.093 1.00 39.41 O
ATOM 4 OP2 U A 55 11.696 -19.024 32.802 1.00 37.73 O
ATOM 5 O5' U A 55 9.264 -19.175 33.358 1.00 38.75 O
ATOM 6 C5' U A 55 8.043 -18.759 33.995 1.00 37.47 C
ATOM 7 C4' U A 55 6.921 -19.728 33.691 1.00 36.63 C
ATOM 8 O4' U A 55 6.497 -19.608 32.305 1.00 36.04 O
ATOM 9 C3' U A 55 7.217 -21.208 33.863 1.00 36.13 C
ATOM 10 O3' U A 55 7.158 -21.620 35.222 1.00 36.37 O
ATOM 11 C2' U A 55 6.132 -21.853 33.004 1.00 35.66 C
ATOM 12 O2' U A 55 4.882 -21.909 33.671 1.00 35.80 O
ATOM 13 C1' U A 55 6.033 -20.865 31.837 1.00 34.89 C
ATOM 14 N1 U A 55 6.859 -21.284 30.692 1.00 32.63 N
ATOM 15 C2 U A 55 6.259 -22.035 29.689 1.00 30.83 C
ATOM 16 O2 U A 55 5.077 -22.314 29.679 1.00 31.16 O
ATOM 17 N3 U A 55 7.105 -22.447 28.692 1.00 30.07 N
ATOM 18 C4 U A 55 8.460 -22.185 28.586 1.00 29.76 C
ATOM 19 O4 U A 55 9.106 -22.690 27.665 1.00 28.21 O
ATOM 20 C5 U A 55 8.993 -21.378 29.636 1.00 29.72 C
ATOM 21 C6 U A 55 8.198 -20.964 30.626 1.00 31.19 C
ATOM 22 P A A 56 8.092 -22.834 35.724 1.00 36.54 P
ATOM 23 OP1 A A 56 8.170 -22.732 37.201 1.00 37.32 O
ATOM 24 OP2 A A 56 9.348 -22.840 34.914 1.00 35.84 O
ATOM 25 O5' A A 56 7.269 -24.150 35.351 1.00 35.61 O
TER
ATOM 1 O3' U B 55 7.158 -21.620 35.222 1.00 36.37 O
ATOM 2 P A B 56 8.092 -22.834 35.724 1.00 36.54 P
ATOM 3 OP1 A B 56 8.170 -22.732 37.201 1.00 37.32 O
ATOM 4 OP2 A B 56 9.348 -22.840 34.914 1.00 35.84 O
ATOM 5 O5' A B 56 7.269 -24.150 35.351 1.00 35.61 O
ATOM 6 C5' A B 56 7.912 -25.447 35.298 1.00 33.45 C
ATOM 7 C4' A B 56 7.015 -26.458 34.611 1.00 32.10 C
ATOM 8 O4' A B 56 5.816 -26.666 35.398 1.00 31.85 O
ATOM 9 C3' A B 56 6.504 -26.062 33.236 1.00 31.04 C
ATOM 10 O3' A B 56 7.449 -26.382 32.225 1.00 30.49 O
ATOM 11 C2' A B 56 5.210 -26.857 33.102 1.00 30.64 C
ATOM 12 O2' A B 56 5.417 -28.188 32.689 1.00 30.16 O
ATOM 13 C1' A B 56 4.709 -26.884 34.543 1.00 30.57 C
ATOM 14 N9 A B 56 3.691 -25.887 34.859 1.00 30.27 N
ATOM 15 C8 A B 56 3.831 -24.772 35.646 1.00 29.96 C
ATOM 16 N7 A B 56 2.718 -24.102 35.817 1.00 30.24 N
ATOM 17 C5 A B 56 1.784 -24.815 35.080 1.00 29.76 C
ATOM 18 C6 A B 56 0.407 -24.630 34.869 1.00 30.18 C
ATOM 19 N6 A B 56 -0.298 -23.632 35.415 1.00 30.75 N
ATOM 20 N1 A B 56 -0.230 -25.513 34.071 1.00 29.93 N
ATOM 21 C2 A B 56 0.478 -26.511 33.528 1.00 29.78 C
ATOM 22 N3 A B 56 1.772 -26.796 33.658 1.00 30.03 N
ATOM 23 C4 A B 56 2.374 -25.902 34.461 1.00 30.08 C
ATOM 24 P A B 57 7.541 -25.460 30.915 1.00 30.25 P
ATOM 25 OP1 A B 57 8.525 -26.039 29.956 1.00 30.17 O
ATOM 26 OP2 A B 57 7.698 -24.057 31.372 1.00 31.06 O
ATOM 27 O5' A B 57 6.092 -25.615 30.276 1.00 29.79 O
TER
Atoms:
C4: (8.460,-22.185,28.586)
N3: (7.105,-22.447,28.692)
OP1: (10.804,-18.238,35.093)
OP2: (11.696,-19.024,32.802)
C2: (6.259,-22.035,29.689)
C1': (6.033,-20.865,31.837)
C3': (7.217,-21.208,33.863)
O5': (9.264,-19.175,33.358)
O4': (6.497,-19.608,32.305)
C5': (8.043,-18.759,33.995)
P: (10.625,-18.385,33.623)
C4': (6.921,-19.728,33.691)
C2': (6.132,-21.853,33.004)
O2': (4.882,-21.909,33.671)
N1: (6.859,-21.284,30.692)
O4: (9.106,-22.690,27.665)
O2: (5.077,-22.314,29.679)
C6: (8.198,-20.964,30.626)
C5: (8.993,-21.378,29.636)
O3': (7.158,-21.620,35.222)
N3: (7.105,-22.447,28.692)
OP1: (10.804,-18.238,35.093)
OP2: (11.696,-19.024,32.802)
C2: (6.259,-22.035,29.689)
C1': (6.033,-20.865,31.837)
C3': (7.217,-21.208,33.863)
O5': (9.264,-19.175,33.358)
O4': (6.497,-19.608,32.305)
C5': (8.043,-18.759,33.995)
P: (10.625,-18.385,33.623)
C4': (6.921,-19.728,33.691)
C2': (6.132,-21.853,33.004)
O2': (4.882,-21.909,33.671)
N1: (6.859,-21.284,30.692)
O4: (9.106,-22.690,27.665)
O2: (5.077,-22.314,29.679)
C6: (8.198,-20.964,30.626)
C5: (8.993,-21.378,29.636)
O3': (7.158,-21.620,35.222)
OP1: (8.170,-22.732,37.201)
OP2: (9.348,-22.840,34.914)
C3': (6.504,-26.062,33.236)
C1': (4.709,-26.884,34.543)
C5': (7.912,-25.447,35.298)
O4': (5.816,-26.666,35.398)
C8: (3.831,-24.772,35.646)
O2': (5.417,-28.188,32.689)
C6: (0.407,-24.630,34.869)
C5: (1.784,-24.815,35.080)
C4: (2.374,-25.902,34.461)
P: (8.092,-22.834,35.724)
C4': (7.015,-26.458,34.611)
C2': (5.210,-26.857,33.102)
C2: (0.478,-26.511,33.528)
N1: (-0.230,-25.513,34.071)
N3: (1.772,-26.796,33.658)
N6: (-0.298,-23.632,35.415)
N7: (2.718,-24.102,35.817)
N9: (3.691,-25.887,34.859)
O5': (7.269,-24.150,35.351)
O3': (7.449,-26.382,32.225)
OP2: (9.348,-22.840,34.914)
C3': (6.504,-26.062,33.236)
C1': (4.709,-26.884,34.543)
C5': (7.912,-25.447,35.298)
O4': (5.816,-26.666,35.398)
C8: (3.831,-24.772,35.646)
O2': (5.417,-28.188,32.689)
C6: (0.407,-24.630,34.869)
C5: (1.784,-24.815,35.080)
C4: (2.374,-25.902,34.461)
P: (8.092,-22.834,35.724)
C4': (7.015,-26.458,34.611)
C2': (5.210,-26.857,33.102)
C2: (0.478,-26.511,33.528)
N1: (-0.230,-25.513,34.071)
N3: (1.772,-26.796,33.658)
N6: (-0.298,-23.632,35.415)
N7: (2.718,-24.102,35.817)
N9: (3.691,-25.887,34.859)
O5': (7.269,-24.150,35.351)
O3': (7.449,-26.382,32.225)
Image (generated by PyMOL):