ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1083:A1042

Extra

PDB:
ATOM 1 O3' A A1082 36.364 100.462 121.092 1.00 44.15 O
ATOM 2 P A A1083 35.274 99.795 120.122 1.00 45.42 P
ATOM 3 OP1 A A1083 35.758 100.128 118.767 1.00 46.38 O
ATOM 4 OP2 A A1083 33.887 100.180 120.522 1.00 46.31 O
ATOM 5 O5' A A1083 35.438 98.236 120.398 1.00 43.48 O
ATOM 6 C5' A A1083 36.669 97.563 120.102 1.00 41.44 C
ATOM 7 C4' A A1083 36.415 96.102 119.847 1.00 41.75 C
ATOM 8 O4' A A1083 35.123 95.903 119.233 1.00 42.63 O
ATOM 9 C3' A A1083 37.419 95.487 118.900 1.00 42.10 C
ATOM 10 O3' A A1083 38.546 95.008 119.592 1.00 41.41 O
ATOM 11 C2' A A1083 36.625 94.420 118.169 1.00 43.34 C
ATOM 12 O2' A A1083 36.548 93.203 118.880 1.00 42.51 O
ATOM 13 C1' A A1083 35.258 95.096 118.074 1.00 43.51 C
ATOM 14 N9 A A1083 35.094 95.963 116.902 1.00 44.41 N
ATOM 15 C8 A A1083 34.749 97.294 116.917 1.00 44.69 C
ATOM 16 N7 A A1083 34.630 97.827 115.731 1.00 44.08 N
ATOM 17 C5 A A1083 34.925 96.786 114.870 1.00 43.82 C
ATOM 18 C6 A A1083 34.962 96.715 113.478 1.00 43.65 C
ATOM 19 N6 A A1083 34.640 97.737 112.691 1.00 42.19 N
ATOM 20 N1 A A1083 35.323 95.542 112.917 1.00 44.93 N
ATOM 21 C2 A A1083 35.591 94.508 113.725 1.00 46.52 C
ATOM 22 N3 A A1083 35.563 94.446 115.056 1.00 46.16 N
ATOM 23 C4 A A1083 35.223 95.634 115.575 1.00 44.12 C
ATOM 24 P U A1084 39.921 95.787 119.450 1.00 39.24 P
ATOM 25 OP1 U A1084 40.928 95.130 120.315 1.00 40.12 O
ATOM 26 OP2 U A1084 39.587 97.203 119.652 1.00 38.55 O
ATOM 27 O5' U A1084 40.307 95.542 117.929 1.00 37.72 O
TER

ATOM 1 O3' A B1041 38.169 96.013 103.576 1.00 37.52 O
ATOM 2 P C B1042 38.833 94.959 104.581 1.00 38.59 P
ATOM 3 OP1 C B1042 40.293 94.966 104.398 1.00 40.42 O
ATOM 4 OP2 C B1042 38.101 93.683 104.475 1.00 38.07 O
ATOM 5 O5' C B1042 38.527 95.548 106.024 1.00 38.10 O
ATOM 6 C5' C B1042 38.962 94.824 107.182 1.00 37.28 C
ATOM 7 C4' C B1042 37.995 94.991 108.329 1.00 37.46 C
ATOM 8 O4' C B1042 38.025 96.355 108.807 1.00 38.04 O
ATOM 9 C3' C B1042 36.524 94.703 108.087 1.00 36.14 C
ATOM 10 O3' C B1042 36.265 93.289 108.121 1.00 37.26 O
ATOM 11 C2' C B1042 35.890 95.452 109.259 1.00 36.30 C
ATOM 12 O2' C B1042 36.137 94.835 110.504 1.00 34.61 O
ATOM 13 C1' C B1042 36.746 96.712 109.304 1.00 36.93 C
ATOM 14 N1 C B1042 36.224 97.806 108.475 1.00 38.70 N
ATOM 15 C2 C B1042 35.108 98.500 108.897 1.00 38.37 C
ATOM 16 O2 C B1042 34.566 98.179 109.972 1.00 39.88 O
ATOM 17 N3 C B1042 34.637 99.502 108.127 1.00 38.44 N
ATOM 18 C4 C B1042 35.243 99.808 106.975 1.00 39.44 C
ATOM 19 N4 C B1042 34.733 100.789 106.225 1.00 40.25 N
ATOM 20 C5 C B1042 36.388 99.120 106.534 1.00 39.64 C
ATOM 21 C6 C B1042 36.837 98.134 107.299 1.00 39.81 C
ATOM 22 P C B1043 34.988 92.701 107.361 1.00 36.65 P
ATOM 23 OP1 C B1043 34.959 91.235 107.533 1.00 37.21 O
ATOM 24 OP2 C B1043 35.021 93.273 106.011 1.00 35.24 O
ATOM 25 O5' C B1043 33.780 93.270 108.213 1.00 34.98 O
TER

Atoms:
OP1: (35.758,100.128,118.767)
OP2: (33.887,100.180,120.522)
C3': (37.419,95.487,118.900)
C1': (35.258,95.096,118.074)
C5': (36.669,97.563,120.102)
O4': (35.123,95.903,119.233)
C8: (34.749,97.294,116.917)
O2': (36.548,93.203,118.880)
C6: (34.962,96.715,113.478)
C5: (34.925,96.786,114.870)
C4: (35.223,95.634,115.575)
P: (35.274,99.795,120.122)
C4': (36.415,96.102,119.847)
C2': (36.625,94.420,118.169)
C2: (35.591,94.508,113.725)
N1: (35.323,95.542,112.917)
N3: (35.563,94.446,115.056)
N6: (34.640,97.737,112.691)
N7: (34.630,97.827,115.731)
N9: (35.094,95.963,116.902)
O5': (35.438,98.236,120.398)
O3': (38.546,95.008,119.592)
C2: (35.108,98.500,108.897)
OP1: (40.293,94.966,104.398)
OP2: (38.101,93.683,104.475)
C4: (35.243,99.808,106.975)
O5': (38.527,95.548,106.024)
C3': (36.524,94.703,108.087)
C1': (36.746,96.712,109.304)
O4': (38.025,96.355,108.807)
C5': (38.962,94.824,107.182)
P: (38.833,94.959,104.581)
O2: (34.566,98.179,109.972)
C4': (37.995,94.991,108.329)
C2': (35.890,95.452,109.259)
O2': (36.137,94.835,110.504)
N1: (36.224,97.806,108.475)
N3: (34.637,99.502,108.127)
N4: (34.733,100.789,106.225)
C6: (36.837,98.134,107.299)
C5: (36.388,99.120,106.534)
O3': (36.265,93.289,108.121)
Image (generated by PyMOL):
PyMOL image
show in jmol