Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A259:A260
Extra
PDB:
ATOM 1 O3' G A 258 -23.746 -0.184 -62.400 1.00 42.74 O
ATOM 2 P U A 259 -23.254 -0.397 -63.922 1.00 32.44 P
ATOM 3 OP1 U A 259 -23.545 -1.812 -64.287 1.00 32.44 O
ATOM 4 OP2 U A 259 -21.867 0.097 -64.009 1.00 32.44 O
ATOM 5 O5' U A 259 -24.207 0.563 -64.731 1.00 32.44 O
ATOM 6 C5' U A 259 -25.601 0.437 -64.604 1.00 32.44 C
ATOM 7 C4' U A 259 -26.225 1.743 -64.238 1.00 32.44 C
ATOM 8 O4' U A 259 -25.670 2.232 -63.001 1.00 32.44 O
ATOM 9 C3' U A 259 -25.984 2.881 -65.201 1.00 32.44 C
ATOM 10 O3' U A 259 -26.770 2.777 -66.374 1.00 32.44 O
ATOM 11 C2' U A 259 -26.298 4.099 -64.338 1.00 32.44 C
ATOM 12 O2' U A 259 -27.699 4.336 -64.272 1.00 32.44 O
ATOM 13 C1' U A 259 -25.821 3.631 -62.957 1.00 32.44 C
ATOM 14 N1 U A 259 -24.553 4.242 -62.570 1.00 32.39 N
ATOM 15 C2 U A 259 -24.632 5.612 -62.463 1.00 32.39 C
ATOM 16 O2 U A 259 -25.670 6.197 -62.701 1.00 32.39 O
ATOM 17 N3 U A 259 -23.471 6.249 -62.084 1.00 32.39 N
ATOM 18 C4 U A 259 -22.260 5.639 -61.793 1.00 32.39 C
ATOM 19 O4 U A 259 -21.299 6.338 -61.461 1.00 32.39 O
ATOM 20 C5 U A 259 -22.268 4.195 -61.920 1.00 32.39 C
ATOM 21 C6 U A 259 -23.393 3.554 -62.299 1.00 32.39 C
ATOM 22 P A A 260 -26.111 2.209 -67.726 1.00 38.22 P
ATOM 23 OP1 A A 260 -27.212 1.735 -68.600 1.00 38.22 O
ATOM 24 OP2 A A 260 -25.053 1.242 -67.336 1.00 38.22 O
ATOM 25 O5' A A 260 -25.450 3.520 -68.341 1.00 38.22 O
TER
ATOM 1 O3' U B 259 -26.770 2.777 -66.374 1.00 32.44 O
ATOM 2 P A B 260 -26.111 2.209 -67.726 1.00 38.22 P
ATOM 3 OP1 A B 260 -27.212 1.735 -68.600 1.00 38.22 O
ATOM 4 OP2 A B 260 -25.053 1.242 -67.336 1.00 38.22 O
ATOM 5 O5' A B 260 -25.450 3.520 -68.341 1.00 38.22 O
ATOM 6 C5' A B 260 -26.068 4.223 -69.415 1.00 38.22 C
ATOM 7 C4' A B 260 -25.714 5.689 -69.399 1.00 38.22 C
ATOM 8 O4' A B 260 -26.894 6.459 -69.726 1.00 38.22 O
ATOM 9 C3' A B 260 -25.247 6.230 -68.053 1.00 38.22 C
ATOM 10 O3' A B 260 -23.854 6.167 -67.892 1.00 38.22 O
ATOM 11 C2' A B 260 -25.791 7.648 -68.008 1.00 38.22 C
ATOM 12 O2' A B 260 -24.933 8.549 -68.681 1.00 38.22 O
ATOM 13 C1' A B 260 -27.074 7.506 -68.805 1.00 38.22 C
ATOM 14 N9 A B 260 -28.214 7.158 -67.946 1.00 38.43 N
ATOM 15 C8 A B 260 -28.481 5.953 -67.351 1.00 38.43 C
ATOM 16 N7 A B 260 -29.587 5.979 -66.668 1.00 38.43 N
ATOM 17 C5 A B 260 -30.068 7.277 -66.840 1.00 38.43 C
ATOM 18 C6 A B 260 -31.212 7.957 -66.374 1.00 38.43 C
ATOM 19 N6 A B 260 -32.144 7.384 -65.590 1.00 38.43 N
ATOM 20 N1 A B 260 -31.375 9.253 -66.747 1.00 38.43 N
ATOM 21 C2 A B 260 -30.458 9.822 -67.525 1.00 38.43 C
ATOM 22 N3 A B 260 -29.352 9.292 -68.019 1.00 38.43 N
ATOM 23 C4 A B 260 -29.226 8.012 -67.634 1.00 38.43 C
ATOM 24 P A B 261 -23.214 6.571 -66.483 1.00 38.79 P
ATOM 25 OP1 A B 261 -21.729 6.532 -66.640 1.00 38.79 O
ATOM 26 OP2 A B 261 -23.853 5.701 -65.452 1.00 38.79 O
ATOM 27 O5' A B 261 -23.693 8.070 -66.297 1.00 38.78 O
TER
ATOM 2 P U A 259 -23.254 -0.397 -63.922 1.00 32.44 P
ATOM 3 OP1 U A 259 -23.545 -1.812 -64.287 1.00 32.44 O
ATOM 4 OP2 U A 259 -21.867 0.097 -64.009 1.00 32.44 O
ATOM 5 O5' U A 259 -24.207 0.563 -64.731 1.00 32.44 O
ATOM 6 C5' U A 259 -25.601 0.437 -64.604 1.00 32.44 C
ATOM 7 C4' U A 259 -26.225 1.743 -64.238 1.00 32.44 C
ATOM 8 O4' U A 259 -25.670 2.232 -63.001 1.00 32.44 O
ATOM 9 C3' U A 259 -25.984 2.881 -65.201 1.00 32.44 C
ATOM 10 O3' U A 259 -26.770 2.777 -66.374 1.00 32.44 O
ATOM 11 C2' U A 259 -26.298 4.099 -64.338 1.00 32.44 C
ATOM 12 O2' U A 259 -27.699 4.336 -64.272 1.00 32.44 O
ATOM 13 C1' U A 259 -25.821 3.631 -62.957 1.00 32.44 C
ATOM 14 N1 U A 259 -24.553 4.242 -62.570 1.00 32.39 N
ATOM 15 C2 U A 259 -24.632 5.612 -62.463 1.00 32.39 C
ATOM 16 O2 U A 259 -25.670 6.197 -62.701 1.00 32.39 O
ATOM 17 N3 U A 259 -23.471 6.249 -62.084 1.00 32.39 N
ATOM 18 C4 U A 259 -22.260 5.639 -61.793 1.00 32.39 C
ATOM 19 O4 U A 259 -21.299 6.338 -61.461 1.00 32.39 O
ATOM 20 C5 U A 259 -22.268 4.195 -61.920 1.00 32.39 C
ATOM 21 C6 U A 259 -23.393 3.554 -62.299 1.00 32.39 C
ATOM 22 P A A 260 -26.111 2.209 -67.726 1.00 38.22 P
ATOM 23 OP1 A A 260 -27.212 1.735 -68.600 1.00 38.22 O
ATOM 24 OP2 A A 260 -25.053 1.242 -67.336 1.00 38.22 O
ATOM 25 O5' A A 260 -25.450 3.520 -68.341 1.00 38.22 O
TER
ATOM 1 O3' U B 259 -26.770 2.777 -66.374 1.00 32.44 O
ATOM 2 P A B 260 -26.111 2.209 -67.726 1.00 38.22 P
ATOM 3 OP1 A B 260 -27.212 1.735 -68.600 1.00 38.22 O
ATOM 4 OP2 A B 260 -25.053 1.242 -67.336 1.00 38.22 O
ATOM 5 O5' A B 260 -25.450 3.520 -68.341 1.00 38.22 O
ATOM 6 C5' A B 260 -26.068 4.223 -69.415 1.00 38.22 C
ATOM 7 C4' A B 260 -25.714 5.689 -69.399 1.00 38.22 C
ATOM 8 O4' A B 260 -26.894 6.459 -69.726 1.00 38.22 O
ATOM 9 C3' A B 260 -25.247 6.230 -68.053 1.00 38.22 C
ATOM 10 O3' A B 260 -23.854 6.167 -67.892 1.00 38.22 O
ATOM 11 C2' A B 260 -25.791 7.648 -68.008 1.00 38.22 C
ATOM 12 O2' A B 260 -24.933 8.549 -68.681 1.00 38.22 O
ATOM 13 C1' A B 260 -27.074 7.506 -68.805 1.00 38.22 C
ATOM 14 N9 A B 260 -28.214 7.158 -67.946 1.00 38.43 N
ATOM 15 C8 A B 260 -28.481 5.953 -67.351 1.00 38.43 C
ATOM 16 N7 A B 260 -29.587 5.979 -66.668 1.00 38.43 N
ATOM 17 C5 A B 260 -30.068 7.277 -66.840 1.00 38.43 C
ATOM 18 C6 A B 260 -31.212 7.957 -66.374 1.00 38.43 C
ATOM 19 N6 A B 260 -32.144 7.384 -65.590 1.00 38.43 N
ATOM 20 N1 A B 260 -31.375 9.253 -66.747 1.00 38.43 N
ATOM 21 C2 A B 260 -30.458 9.822 -67.525 1.00 38.43 C
ATOM 22 N3 A B 260 -29.352 9.292 -68.019 1.00 38.43 N
ATOM 23 C4 A B 260 -29.226 8.012 -67.634 1.00 38.43 C
ATOM 24 P A B 261 -23.214 6.571 -66.483 1.00 38.79 P
ATOM 25 OP1 A B 261 -21.729 6.532 -66.640 1.00 38.79 O
ATOM 26 OP2 A B 261 -23.853 5.701 -65.452 1.00 38.79 O
ATOM 27 O5' A B 261 -23.693 8.070 -66.297 1.00 38.78 O
TER
Atoms:
C4: (-22.260,5.639,-61.793)
N3: (-23.471,6.249,-62.084)
OP1: (-23.545,-1.812,-64.287)
OP2: (-21.867,0.097,-64.009)
C2: (-24.632,5.612,-62.463)
C1': (-25.821,3.631,-62.957)
C3': (-25.984,2.881,-65.201)
O5': (-24.207,0.563,-64.731)
O4': (-25.670,2.232,-63.001)
C5': (-25.601,0.437,-64.604)
P: (-23.254,-0.397,-63.922)
C4': (-26.225,1.743,-64.238)
C2': (-26.298,4.099,-64.338)
O2': (-27.699,4.336,-64.272)
N1: (-24.553,4.242,-62.570)
O4: (-21.299,6.338,-61.461)
O2: (-25.670,6.197,-62.701)
C6: (-23.393,3.554,-62.299)
C5: (-22.268,4.195,-61.920)
O3': (-26.770,2.777,-66.374)
N3: (-23.471,6.249,-62.084)
OP1: (-23.545,-1.812,-64.287)
OP2: (-21.867,0.097,-64.009)
C2: (-24.632,5.612,-62.463)
C1': (-25.821,3.631,-62.957)
C3': (-25.984,2.881,-65.201)
O5': (-24.207,0.563,-64.731)
O4': (-25.670,2.232,-63.001)
C5': (-25.601,0.437,-64.604)
P: (-23.254,-0.397,-63.922)
C4': (-26.225,1.743,-64.238)
C2': (-26.298,4.099,-64.338)
O2': (-27.699,4.336,-64.272)
N1: (-24.553,4.242,-62.570)
O4: (-21.299,6.338,-61.461)
O2: (-25.670,6.197,-62.701)
C6: (-23.393,3.554,-62.299)
C5: (-22.268,4.195,-61.920)
O3': (-26.770,2.777,-66.374)
OP1: (-27.212,1.735,-68.600)
OP2: (-25.053,1.242,-67.336)
C3': (-25.247,6.230,-68.053)
C1': (-27.074,7.506,-68.805)
C5': (-26.068,4.223,-69.415)
O4': (-26.894,6.459,-69.726)
C8: (-28.481,5.953,-67.351)
O2': (-24.933,8.549,-68.681)
C6: (-31.212,7.957,-66.374)
C5: (-30.068,7.277,-66.840)
C4: (-29.226,8.012,-67.634)
P: (-26.111,2.209,-67.726)
C4': (-25.714,5.689,-69.399)
C2': (-25.791,7.648,-68.008)
C2: (-30.458,9.822,-67.525)
N1: (-31.375,9.253,-66.747)
N3: (-29.352,9.292,-68.019)
N6: (-32.144,7.384,-65.590)
N7: (-29.587,5.979,-66.668)
N9: (-28.214,7.158,-67.946)
O5': (-25.450,3.520,-68.341)
O3': (-23.854,6.167,-67.892)
OP2: (-25.053,1.242,-67.336)
C3': (-25.247,6.230,-68.053)
C1': (-27.074,7.506,-68.805)
C5': (-26.068,4.223,-69.415)
O4': (-26.894,6.459,-69.726)
C8: (-28.481,5.953,-67.351)
O2': (-24.933,8.549,-68.681)
C6: (-31.212,7.957,-66.374)
C5: (-30.068,7.277,-66.840)
C4: (-29.226,8.012,-67.634)
P: (-26.111,2.209,-67.726)
C4': (-25.714,5.689,-69.399)
C2': (-25.791,7.648,-68.008)
C2: (-30.458,9.822,-67.525)
N1: (-31.375,9.253,-66.747)
N3: (-29.352,9.292,-68.019)
N6: (-32.144,7.384,-65.590)
N7: (-29.587,5.979,-66.668)
N9: (-28.214,7.158,-67.946)
O5': (-25.450,3.520,-68.341)
O3': (-23.854,6.167,-67.892)
Image (generated by PyMOL):