Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RG5:B52:B53
Extra
PDB:
ATOM 1 O3' U A 51 -8.415 19.969 2.521 1.00 43.70 O
ATOM 2 P U A 52 -8.991 19.510 3.937 1.00 47.40 P
ATOM 3 OP1 U A 52 -10.253 20.275 4.026 1.00 48.12 O
ATOM 4 OP2 U A 52 -7.952 19.539 4.985 1.00 45.14 O
ATOM 5 O5' U A 52 -9.303 17.933 3.808 1.00 48.28 O
ATOM 6 C5' U A 52 -10.429 17.442 3.082 1.00 48.49 C
ATOM 7 C4' U A 52 -10.434 15.916 3.165 1.00 49.57 C
ATOM 8 O4' U A 52 -9.161 15.396 2.710 1.00 49.00 O
ATOM 9 C3' U A 52 -10.532 15.331 4.564 1.00 49.28 C
ATOM 10 O3' U A 52 -11.865 15.396 5.055 1.00 49.58 O
ATOM 11 C2' U A 52 -10.018 13.908 4.361 1.00 48.75 C
ATOM 12 O2' U A 52 -10.943 13.026 3.771 1.00 49.33 O
ATOM 13 C1' U A 52 -8.923 14.143 3.329 1.00 49.68 C
ATOM 14 N1 U A 52 -7.561 14.116 3.926 1.00 49.50 N
ATOM 15 C2 U A 52 -6.947 12.895 4.085 1.00 50.02 C
ATOM 16 O2 U A 52 -7.467 11.848 3.756 1.00 50.98 O
ATOM 17 N3 U A 52 -5.695 12.938 4.636 1.00 50.44 N
ATOM 18 C4 U A 52 -5.030 14.074 5.039 1.00 51.58 C
ATOM 19 O4 U A 52 -3.912 13.973 5.524 1.00 54.01 O
ATOM 20 C5 U A 52 -5.736 15.316 4.848 1.00 51.35 C
ATOM 21 C6 U A 52 -6.954 15.291 4.303 1.00 49.88 C
ATOM 22 P A A 53 -12.111 15.760 6.599 1.00 50.17 P
ATOM 23 OP1 A A 53 -13.548 15.496 6.830 1.00 49.91 O
ATOM 24 OP2 A A 53 -11.545 17.092 6.880 1.00 49.87 O
ATOM 25 O5' A A 53 -11.261 14.702 7.437 1.00 47.35 O
TER
ATOM 1 O3' U B 52 -11.865 15.396 5.055 1.00 49.58 O
ATOM 2 P A B 53 -12.111 15.760 6.599 1.00 50.17 P
ATOM 3 OP1 A B 53 -13.548 15.496 6.830 1.00 49.91 O
ATOM 4 OP2 A B 53 -11.545 17.092 6.880 1.00 49.87 O
ATOM 5 O5' A B 53 -11.261 14.702 7.437 1.00 47.35 O
ATOM 6 C5' A B 53 -10.907 15.055 8.759 1.00 47.88 C
ATOM 7 C4' A B 53 -10.973 13.807 9.599 1.00 47.43 C
ATOM 8 O4' A B 53 -12.343 13.306 9.636 1.00 46.72 O
ATOM 9 C3' A B 53 -10.195 12.677 8.961 1.00 48.14 C
ATOM 10 O3' A B 53 -8.832 12.779 9.321 1.00 50.41 O
ATOM 11 C2' A B 53 -10.862 11.477 9.610 1.00 45.82 C
ATOM 12 O2' A B 53 -10.345 11.219 10.891 1.00 47.28 O
ATOM 13 C1' A B 53 -12.328 11.887 9.674 1.00 44.08 C
ATOM 14 N9 A B 53 -13.009 11.335 8.505 1.00 41.61 N
ATOM 15 C8 A B 53 -13.519 11.990 7.418 1.00 39.62 C
ATOM 16 N7 A B 53 -14.063 11.191 6.527 1.00 39.53 N
ATOM 17 C5 A B 53 -13.884 9.927 7.052 1.00 39.02 C
ATOM 18 C6 A B 53 -14.226 8.635 6.587 1.00 37.12 C
ATOM 19 N6 A B 53 -14.845 8.392 5.425 1.00 31.71 N
ATOM 20 N1 A B 53 -13.910 7.591 7.372 1.00 39.08 N
ATOM 21 C2 A B 53 -13.291 7.802 8.539 1.00 40.02 C
ATOM 22 N3 A B 53 -12.904 8.964 9.072 1.00 41.35 N
ATOM 23 C4 A B 53 -13.234 9.997 8.268 1.00 40.76 C
ATOM 24 P G B 54 -7.659 12.590 8.238 1.00 52.60 P
ATOM 25 OP1 G B 54 -6.426 12.857 9.000 1.00 53.04 O
ATOM 26 OP2 G B 54 -7.958 13.386 7.026 1.00 52.53 O
ATOM 27 O5' G B 54 -7.696 11.039 7.836 1.00 51.24 O
TER
ATOM 2 P U A 52 -8.991 19.510 3.937 1.00 47.40 P
ATOM 3 OP1 U A 52 -10.253 20.275 4.026 1.00 48.12 O
ATOM 4 OP2 U A 52 -7.952 19.539 4.985 1.00 45.14 O
ATOM 5 O5' U A 52 -9.303 17.933 3.808 1.00 48.28 O
ATOM 6 C5' U A 52 -10.429 17.442 3.082 1.00 48.49 C
ATOM 7 C4' U A 52 -10.434 15.916 3.165 1.00 49.57 C
ATOM 8 O4' U A 52 -9.161 15.396 2.710 1.00 49.00 O
ATOM 9 C3' U A 52 -10.532 15.331 4.564 1.00 49.28 C
ATOM 10 O3' U A 52 -11.865 15.396 5.055 1.00 49.58 O
ATOM 11 C2' U A 52 -10.018 13.908 4.361 1.00 48.75 C
ATOM 12 O2' U A 52 -10.943 13.026 3.771 1.00 49.33 O
ATOM 13 C1' U A 52 -8.923 14.143 3.329 1.00 49.68 C
ATOM 14 N1 U A 52 -7.561 14.116 3.926 1.00 49.50 N
ATOM 15 C2 U A 52 -6.947 12.895 4.085 1.00 50.02 C
ATOM 16 O2 U A 52 -7.467 11.848 3.756 1.00 50.98 O
ATOM 17 N3 U A 52 -5.695 12.938 4.636 1.00 50.44 N
ATOM 18 C4 U A 52 -5.030 14.074 5.039 1.00 51.58 C
ATOM 19 O4 U A 52 -3.912 13.973 5.524 1.00 54.01 O
ATOM 20 C5 U A 52 -5.736 15.316 4.848 1.00 51.35 C
ATOM 21 C6 U A 52 -6.954 15.291 4.303 1.00 49.88 C
ATOM 22 P A A 53 -12.111 15.760 6.599 1.00 50.17 P
ATOM 23 OP1 A A 53 -13.548 15.496 6.830 1.00 49.91 O
ATOM 24 OP2 A A 53 -11.545 17.092 6.880 1.00 49.87 O
ATOM 25 O5' A A 53 -11.261 14.702 7.437 1.00 47.35 O
TER
ATOM 1 O3' U B 52 -11.865 15.396 5.055 1.00 49.58 O
ATOM 2 P A B 53 -12.111 15.760 6.599 1.00 50.17 P
ATOM 3 OP1 A B 53 -13.548 15.496 6.830 1.00 49.91 O
ATOM 4 OP2 A B 53 -11.545 17.092 6.880 1.00 49.87 O
ATOM 5 O5' A B 53 -11.261 14.702 7.437 1.00 47.35 O
ATOM 6 C5' A B 53 -10.907 15.055 8.759 1.00 47.88 C
ATOM 7 C4' A B 53 -10.973 13.807 9.599 1.00 47.43 C
ATOM 8 O4' A B 53 -12.343 13.306 9.636 1.00 46.72 O
ATOM 9 C3' A B 53 -10.195 12.677 8.961 1.00 48.14 C
ATOM 10 O3' A B 53 -8.832 12.779 9.321 1.00 50.41 O
ATOM 11 C2' A B 53 -10.862 11.477 9.610 1.00 45.82 C
ATOM 12 O2' A B 53 -10.345 11.219 10.891 1.00 47.28 O
ATOM 13 C1' A B 53 -12.328 11.887 9.674 1.00 44.08 C
ATOM 14 N9 A B 53 -13.009 11.335 8.505 1.00 41.61 N
ATOM 15 C8 A B 53 -13.519 11.990 7.418 1.00 39.62 C
ATOM 16 N7 A B 53 -14.063 11.191 6.527 1.00 39.53 N
ATOM 17 C5 A B 53 -13.884 9.927 7.052 1.00 39.02 C
ATOM 18 C6 A B 53 -14.226 8.635 6.587 1.00 37.12 C
ATOM 19 N6 A B 53 -14.845 8.392 5.425 1.00 31.71 N
ATOM 20 N1 A B 53 -13.910 7.591 7.372 1.00 39.08 N
ATOM 21 C2 A B 53 -13.291 7.802 8.539 1.00 40.02 C
ATOM 22 N3 A B 53 -12.904 8.964 9.072 1.00 41.35 N
ATOM 23 C4 A B 53 -13.234 9.997 8.268 1.00 40.76 C
ATOM 24 P G B 54 -7.659 12.590 8.238 1.00 52.60 P
ATOM 25 OP1 G B 54 -6.426 12.857 9.000 1.00 53.04 O
ATOM 26 OP2 G B 54 -7.958 13.386 7.026 1.00 52.53 O
ATOM 27 O5' G B 54 -7.696 11.039 7.836 1.00 51.24 O
TER
Atoms:
C4: (-5.030,14.074,5.039)
N3: (-5.695,12.938,4.636)
OP1: (-10.253,20.275,4.026)
OP2: (-7.952,19.539,4.985)
C2: (-6.947,12.895,4.085)
C1': (-8.923,14.143,3.329)
C3': (-10.532,15.331,4.564)
O5': (-9.303,17.933,3.808)
O4': (-9.161,15.396,2.710)
C5': (-10.429,17.442,3.082)
P: (-8.991,19.510,3.937)
C4': (-10.434,15.916,3.165)
C2': (-10.018,13.908,4.361)
O2': (-10.943,13.026,3.771)
N1: (-7.561,14.116,3.926)
O4: (-3.912,13.973,5.524)
O2: (-7.467,11.848,3.756)
C6: (-6.954,15.291,4.303)
C5: (-5.736,15.316,4.848)
O3': (-11.865,15.396,5.055)
N3: (-5.695,12.938,4.636)
OP1: (-10.253,20.275,4.026)
OP2: (-7.952,19.539,4.985)
C2: (-6.947,12.895,4.085)
C1': (-8.923,14.143,3.329)
C3': (-10.532,15.331,4.564)
O5': (-9.303,17.933,3.808)
O4': (-9.161,15.396,2.710)
C5': (-10.429,17.442,3.082)
P: (-8.991,19.510,3.937)
C4': (-10.434,15.916,3.165)
C2': (-10.018,13.908,4.361)
O2': (-10.943,13.026,3.771)
N1: (-7.561,14.116,3.926)
O4: (-3.912,13.973,5.524)
O2: (-7.467,11.848,3.756)
C6: (-6.954,15.291,4.303)
C5: (-5.736,15.316,4.848)
O3': (-11.865,15.396,5.055)
OP1: (-13.548,15.496,6.830)
OP2: (-11.545,17.092,6.880)
C3': (-10.195,12.677,8.961)
C1': (-12.328,11.887,9.674)
C5': (-10.907,15.055,8.759)
O4': (-12.343,13.306,9.636)
C8: (-13.519,11.990,7.418)
O2': (-10.345,11.219,10.891)
C6: (-14.226,8.635,6.587)
C5: (-13.884,9.927,7.052)
C4: (-13.234,9.997,8.268)
P: (-12.111,15.760,6.599)
C4': (-10.973,13.807,9.599)
C2': (-10.862,11.477,9.610)
C2: (-13.291,7.802,8.539)
N1: (-13.910,7.591,7.372)
N3: (-12.904,8.964,9.072)
N6: (-14.845,8.392,5.425)
N7: (-14.063,11.191,6.527)
N9: (-13.009,11.335,8.505)
O5': (-11.261,14.702,7.437)
O3': (-8.832,12.779,9.321)
OP2: (-11.545,17.092,6.880)
C3': (-10.195,12.677,8.961)
C1': (-12.328,11.887,9.674)
C5': (-10.907,15.055,8.759)
O4': (-12.343,13.306,9.636)
C8: (-13.519,11.990,7.418)
O2': (-10.345,11.219,10.891)
C6: (-14.226,8.635,6.587)
C5: (-13.884,9.927,7.052)
C4: (-13.234,9.997,8.268)
P: (-12.111,15.760,6.599)
C4': (-10.973,13.807,9.599)
C2': (-10.862,11.477,9.610)
C2: (-13.291,7.802,8.539)
N1: (-13.910,7.591,7.372)
N3: (-12.904,8.964,9.072)
N6: (-14.845,8.392,5.425)
N7: (-14.063,11.191,6.527)
N9: (-13.009,11.335,8.505)
O5': (-11.261,14.702,7.437)
O3': (-8.832,12.779,9.321)
Image (generated by PyMOL):