Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RG5:A52:A53
Extra
PDB:
ATOM 1 O3' U A 51 31.713 19.547 2.526 1.00 59.77 O
ATOM 2 P U A 52 32.160 19.517 0.964 1.00 61.25 P
ATOM 3 OP1 U A 52 33.323 20.440 1.003 1.00 60.08 O
ATOM 4 OP2 U A 52 31.053 19.659 -0.016 1.00 58.22 O
ATOM 5 O5' U A 52 32.613 17.994 0.684 1.00 61.45 O
ATOM 6 C5' U A 52 33.844 17.435 1.157 1.00 60.77 C
ATOM 7 C4' U A 52 33.871 15.977 0.746 1.00 60.63 C
ATOM 8 O4' U A 52 32.583 15.384 1.013 1.00 58.83 O
ATOM 9 C3' U A 52 33.994 15.716 -0.747 1.00 60.76 C
ATOM 10 O3' U A 52 35.327 15.863 -1.175 1.00 62.70 O
ATOM 11 C2' U A 52 33.625 14.243 -0.797 1.00 59.59 C
ATOM 12 O2' U A 52 34.695 13.396 -0.411 1.00 56.12 O
ATOM 13 C1' U A 52 32.495 14.211 0.231 1.00 58.82 C
ATOM 14 N1 U A 52 31.165 14.032 -0.438 1.00 58.03 N
ATOM 15 C2 U A 52 30.805 12.727 -0.694 1.00 56.39 C
ATOM 16 O2 U A 52 31.483 11.778 -0.383 1.00 55.63 O
ATOM 17 N3 U A 52 29.604 12.556 -1.314 1.00 58.13 N
ATOM 18 C4 U A 52 28.741 13.551 -1.710 1.00 58.35 C
ATOM 19 O4 U A 52 27.704 13.198 -2.258 1.00 58.62 O
ATOM 20 C5 U A 52 29.170 14.912 -1.425 1.00 57.70 C
ATOM 21 C6 U A 52 30.355 15.105 -0.815 1.00 57.95 C
ATOM 22 P A A 53 35.764 16.891 -2.322 1.00 63.68 P
ATOM 23 OP1 A A 53 37.138 16.452 -2.666 1.00 65.31 O
ATOM 24 OP2 A A 53 35.538 18.259 -1.801 1.00 62.65 O
ATOM 25 O5' A A 53 34.851 16.655 -3.616 1.00 59.27 O
TER
ATOM 1 O3' U B 52 35.327 15.863 -1.175 1.00 62.70 O
ATOM 2 P A B 53 35.764 16.891 -2.322 1.00 63.68 P
ATOM 3 OP1 A B 53 37.138 16.452 -2.666 1.00 65.31 O
ATOM 4 OP2 A B 53 35.538 18.259 -1.801 1.00 62.65 O
ATOM 5 O5' A B 53 34.851 16.655 -3.616 1.00 59.27 O
ATOM 6 C5' A B 53 34.598 15.356 -3.999 1.00 58.37 C
ATOM 7 C4' A B 53 34.566 15.114 -5.482 1.00 57.46 C
ATOM 8 O4' A B 53 35.929 14.916 -5.950 1.00 55.93 O
ATOM 9 C3' A B 53 33.871 13.784 -5.693 1.00 57.61 C
ATOM 10 O3' A B 53 32.492 13.938 -6.055 1.00 60.01 O
ATOM 11 C2' A B 53 34.723 13.044 -6.723 1.00 55.44 C
ATOM 12 O2' A B 53 34.378 13.343 -8.043 1.00 56.84 O
ATOM 13 C1' A B 53 36.114 13.579 -6.410 1.00 53.74 C
ATOM 14 N9 A B 53 36.812 12.777 -5.392 1.00 48.72 N
ATOM 15 C8 A B 53 37.308 13.212 -4.196 1.00 46.17 C
ATOM 16 N7 A B 53 37.897 12.295 -3.463 1.00 44.17 N
ATOM 17 C5 A B 53 37.772 11.160 -4.236 1.00 44.42 C
ATOM 18 C6 A B 53 38.177 9.834 -4.001 1.00 40.18 C
ATOM 19 N6 A B 53 38.831 9.466 -2.894 1.00 36.52 N
ATOM 20 N1 A B 53 37.917 8.936 -4.958 1.00 40.97 N
ATOM 21 C2 A B 53 37.269 9.332 -6.064 1.00 43.26 C
ATOM 22 N3 A B 53 36.816 10.548 -6.390 1.00 44.36 N
ATOM 23 C4 A B 53 37.109 11.432 -5.427 1.00 45.68 C
ATOM 24 P G B 54 31.366 13.621 -4.948 1.00 60.69 P
ATOM 25 OP1 G B 54 30.030 13.771 -5.568 1.00 61.35 O
ATOM 26 OP2 G B 54 31.719 14.356 -3.713 1.00 58.62 O
ATOM 27 O5' G B 54 31.498 12.038 -4.788 1.00 59.35 O
TER
ATOM 2 P U A 52 32.160 19.517 0.964 1.00 61.25 P
ATOM 3 OP1 U A 52 33.323 20.440 1.003 1.00 60.08 O
ATOM 4 OP2 U A 52 31.053 19.659 -0.016 1.00 58.22 O
ATOM 5 O5' U A 52 32.613 17.994 0.684 1.00 61.45 O
ATOM 6 C5' U A 52 33.844 17.435 1.157 1.00 60.77 C
ATOM 7 C4' U A 52 33.871 15.977 0.746 1.00 60.63 C
ATOM 8 O4' U A 52 32.583 15.384 1.013 1.00 58.83 O
ATOM 9 C3' U A 52 33.994 15.716 -0.747 1.00 60.76 C
ATOM 10 O3' U A 52 35.327 15.863 -1.175 1.00 62.70 O
ATOM 11 C2' U A 52 33.625 14.243 -0.797 1.00 59.59 C
ATOM 12 O2' U A 52 34.695 13.396 -0.411 1.00 56.12 O
ATOM 13 C1' U A 52 32.495 14.211 0.231 1.00 58.82 C
ATOM 14 N1 U A 52 31.165 14.032 -0.438 1.00 58.03 N
ATOM 15 C2 U A 52 30.805 12.727 -0.694 1.00 56.39 C
ATOM 16 O2 U A 52 31.483 11.778 -0.383 1.00 55.63 O
ATOM 17 N3 U A 52 29.604 12.556 -1.314 1.00 58.13 N
ATOM 18 C4 U A 52 28.741 13.551 -1.710 1.00 58.35 C
ATOM 19 O4 U A 52 27.704 13.198 -2.258 1.00 58.62 O
ATOM 20 C5 U A 52 29.170 14.912 -1.425 1.00 57.70 C
ATOM 21 C6 U A 52 30.355 15.105 -0.815 1.00 57.95 C
ATOM 22 P A A 53 35.764 16.891 -2.322 1.00 63.68 P
ATOM 23 OP1 A A 53 37.138 16.452 -2.666 1.00 65.31 O
ATOM 24 OP2 A A 53 35.538 18.259 -1.801 1.00 62.65 O
ATOM 25 O5' A A 53 34.851 16.655 -3.616 1.00 59.27 O
TER
ATOM 1 O3' U B 52 35.327 15.863 -1.175 1.00 62.70 O
ATOM 2 P A B 53 35.764 16.891 -2.322 1.00 63.68 P
ATOM 3 OP1 A B 53 37.138 16.452 -2.666 1.00 65.31 O
ATOM 4 OP2 A B 53 35.538 18.259 -1.801 1.00 62.65 O
ATOM 5 O5' A B 53 34.851 16.655 -3.616 1.00 59.27 O
ATOM 6 C5' A B 53 34.598 15.356 -3.999 1.00 58.37 C
ATOM 7 C4' A B 53 34.566 15.114 -5.482 1.00 57.46 C
ATOM 8 O4' A B 53 35.929 14.916 -5.950 1.00 55.93 O
ATOM 9 C3' A B 53 33.871 13.784 -5.693 1.00 57.61 C
ATOM 10 O3' A B 53 32.492 13.938 -6.055 1.00 60.01 O
ATOM 11 C2' A B 53 34.723 13.044 -6.723 1.00 55.44 C
ATOM 12 O2' A B 53 34.378 13.343 -8.043 1.00 56.84 O
ATOM 13 C1' A B 53 36.114 13.579 -6.410 1.00 53.74 C
ATOM 14 N9 A B 53 36.812 12.777 -5.392 1.00 48.72 N
ATOM 15 C8 A B 53 37.308 13.212 -4.196 1.00 46.17 C
ATOM 16 N7 A B 53 37.897 12.295 -3.463 1.00 44.17 N
ATOM 17 C5 A B 53 37.772 11.160 -4.236 1.00 44.42 C
ATOM 18 C6 A B 53 38.177 9.834 -4.001 1.00 40.18 C
ATOM 19 N6 A B 53 38.831 9.466 -2.894 1.00 36.52 N
ATOM 20 N1 A B 53 37.917 8.936 -4.958 1.00 40.97 N
ATOM 21 C2 A B 53 37.269 9.332 -6.064 1.00 43.26 C
ATOM 22 N3 A B 53 36.816 10.548 -6.390 1.00 44.36 N
ATOM 23 C4 A B 53 37.109 11.432 -5.427 1.00 45.68 C
ATOM 24 P G B 54 31.366 13.621 -4.948 1.00 60.69 P
ATOM 25 OP1 G B 54 30.030 13.771 -5.568 1.00 61.35 O
ATOM 26 OP2 G B 54 31.719 14.356 -3.713 1.00 58.62 O
ATOM 27 O5' G B 54 31.498 12.038 -4.788 1.00 59.35 O
TER
Atoms:
C4: (28.741,13.551,-1.710)
N3: (29.604,12.556,-1.314)
OP1: (33.323,20.440,1.003)
OP2: (31.053,19.659,-0.016)
C2: (30.805,12.727,-0.694)
C1': (32.495,14.211,0.231)
C3': (33.994,15.716,-0.747)
O5': (32.613,17.994,0.684)
O4': (32.583,15.384,1.013)
C5': (33.844,17.435,1.157)
P: (32.160,19.517,0.964)
C4': (33.871,15.977,0.746)
C2': (33.625,14.243,-0.797)
O2': (34.695,13.396,-0.411)
N1: (31.165,14.032,-0.438)
O4: (27.704,13.198,-2.258)
O2: (31.483,11.778,-0.383)
C6: (30.355,15.105,-0.815)
C5: (29.170,14.912,-1.425)
O3': (35.327,15.863,-1.175)
N3: (29.604,12.556,-1.314)
OP1: (33.323,20.440,1.003)
OP2: (31.053,19.659,-0.016)
C2: (30.805,12.727,-0.694)
C1': (32.495,14.211,0.231)
C3': (33.994,15.716,-0.747)
O5': (32.613,17.994,0.684)
O4': (32.583,15.384,1.013)
C5': (33.844,17.435,1.157)
P: (32.160,19.517,0.964)
C4': (33.871,15.977,0.746)
C2': (33.625,14.243,-0.797)
O2': (34.695,13.396,-0.411)
N1: (31.165,14.032,-0.438)
O4: (27.704,13.198,-2.258)
O2: (31.483,11.778,-0.383)
C6: (30.355,15.105,-0.815)
C5: (29.170,14.912,-1.425)
O3': (35.327,15.863,-1.175)
OP1: (37.138,16.452,-2.666)
OP2: (35.538,18.259,-1.801)
C3': (33.871,13.784,-5.693)
C1': (36.114,13.579,-6.410)
C5': (34.598,15.356,-3.999)
O4': (35.929,14.916,-5.950)
C8: (37.308,13.212,-4.196)
O2': (34.378,13.343,-8.043)
C6: (38.177,9.834,-4.001)
C5: (37.772,11.160,-4.236)
C4: (37.109,11.432,-5.427)
P: (35.764,16.891,-2.322)
C4': (34.566,15.114,-5.482)
C2': (34.723,13.044,-6.723)
C2: (37.269,9.332,-6.064)
N1: (37.917,8.936,-4.958)
N3: (36.816,10.548,-6.390)
N6: (38.831,9.466,-2.894)
N7: (37.897,12.295,-3.463)
N9: (36.812,12.777,-5.392)
O5': (34.851,16.655,-3.616)
O3': (32.492,13.938,-6.055)
OP2: (35.538,18.259,-1.801)
C3': (33.871,13.784,-5.693)
C1': (36.114,13.579,-6.410)
C5': (34.598,15.356,-3.999)
O4': (35.929,14.916,-5.950)
C8: (37.308,13.212,-4.196)
O2': (34.378,13.343,-8.043)
C6: (38.177,9.834,-4.001)
C5: (37.772,11.160,-4.236)
C4: (37.109,11.432,-5.427)
P: (35.764,16.891,-2.322)
C4': (34.566,15.114,-5.482)
C2': (34.723,13.044,-6.723)
C2: (37.269,9.332,-6.064)
N1: (37.917,8.936,-4.958)
N3: (36.816,10.548,-6.390)
N6: (38.831,9.466,-2.894)
N7: (37.897,12.295,-3.463)
N9: (36.812,12.777,-5.392)
O5': (34.851,16.655,-3.616)
O3': (32.492,13.938,-6.055)
Image (generated by PyMOL):