Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11141:11099
Extra
PDB:
ATOM 1 O3' C A1140 45.841 -3.649 23.468 1.00 72.74 O
ATOM 2 P A A1141 45.020 -3.818 24.823 1.00 43.21 P
ATOM 3 OP1 A A1141 43.754 -3.037 24.694 1.00 43.29 O
ATOM 4 OP2 A A1141 45.945 -3.496 25.937 1.00 42.92 O
ATOM 5 O5' A A1141 44.690 -5.365 24.824 1.00 43.20 O
ATOM 6 C5' A A1141 44.041 -5.963 23.731 1.00 43.50 C
ATOM 7 C4' A A1141 44.169 -7.436 23.815 1.00 43.48 C
ATOM 8 O4' A A1141 45.564 -7.781 23.758 1.00 43.46 O
ATOM 9 C3' A A1141 43.717 -8.044 25.114 1.00 43.16 C
ATOM 10 O3' A A1141 42.324 -8.215 25.172 1.00 43.18 O
ATOM 11 C2' A A1141 44.487 -9.338 25.123 1.00 43.15 C
ATOM 12 O2' A A1141 43.969 -10.184 24.130 1.00 43.44 O
ATOM 13 C1' A A1141 45.827 -8.863 24.612 1.00 43.25 C
ATOM 14 N9 A A1141 46.744 -8.416 25.689 1.00 42.96 N
ATOM 15 C8 A A1141 47.311 -7.188 25.736 1.00 42.93 C
ATOM 16 N7 A A1141 48.115 -7.030 26.754 1.00 42.68 N
ATOM 17 C5 A A1141 48.082 -8.218 27.412 1.00 42.53 C
ATOM 18 C6 A A1141 48.717 -8.596 28.550 1.00 42.27 C
ATOM 19 N6 A A1141 49.487 -7.765 29.205 1.00 42.11 N
ATOM 20 N1 A A1141 48.492 -9.806 29.001 1.00 42.19 N
ATOM 21 C2 A A1141 47.677 -10.570 28.315 1.00 42.37 C
ATOM 22 N3 A A1141 47.011 -10.326 27.219 1.00 42.62 N
ATOM 23 C4 A A1141 47.261 -9.095 26.791 1.00 42.70 C
ATOM 24 P C A1142 41.467 -7.412 26.255 1.00 40.81 P
ATOM 25 OP1 C A1142 40.055 -7.797 26.061 1.00 40.91 O
ATOM 26 OP2 C A1142 41.832 -5.992 26.130 1.00 40.83 O
ATOM 27 O5' C A1142 41.982 -8.005 27.647 1.00 40.46 O
TER
ATOM 1 O3' A B1098 49.924 -13.637 37.968 1.00 37.61 O
ATOM 2 P C B1099 50.603 -13.854 36.539 1.00 31.38 P
ATOM 3 OP1 C B1099 50.517 -15.305 36.226 1.00 31.51 O
ATOM 4 OP2 C B1099 51.947 -13.207 36.599 1.00 31.37 O
ATOM 5 O5' C B1099 49.654 -13.040 35.561 1.00 31.51 O
ATOM 6 C5' C B1099 48.695 -13.705 34.727 1.00 31.69 C
ATOM 7 C4' C B1099 48.523 -12.973 33.437 1.00 31.91 C
ATOM 8 O4' C B1099 48.284 -11.592 33.727 1.00 31.80 O
ATOM 9 C3' C B1099 49.749 -12.955 32.570 1.00 32.09 C
ATOM 10 O3' C B1099 49.858 -14.106 31.738 1.00 32.32 O
ATOM 11 C2' C B1099 49.629 -11.638 31.811 1.00 32.20 C
ATOM 12 O2' C B1099 48.737 -11.765 30.715 1.00 32.43 O
ATOM 13 C1' C B1099 48.969 -10.764 32.848 1.00 31.96 C
ATOM 14 N1 C B1099 49.910 -9.975 33.621 1.00 31.79 N
ATOM 15 C2 C B1099 50.744 -9.081 33.013 1.00 31.90 C
ATOM 16 O2 C B1099 50.690 -9.035 31.784 1.00 32.15 O
ATOM 17 N3 C B1099 51.596 -8.320 33.756 1.00 31.76 N
ATOM 18 C4 C B1099 51.600 -8.413 35.074 1.00 31.51 C
ATOM 19 N4 C B1099 52.423 -7.643 35.752 1.00 31.40 N
ATOM 20 C5 C B1099 50.732 -9.293 35.757 1.00 31.38 C
ATOM 21 C6 C B1099 49.926 -10.037 34.978 1.00 31.53 C
ATOM 22 P C B1100 51.276 -14.760 31.537 1.00 35.35 P
ATOM 23 OP1 C B1100 51.089 -16.049 30.895 1.00 35.55 O
ATOM 24 OP2 C B1100 51.930 -14.701 32.867 1.00 35.08 O
ATOM 25 O5' C B1100 51.983 -13.741 30.530 1.00 35.52 O
TER
ATOM 2 P A A1141 45.020 -3.818 24.823 1.00 43.21 P
ATOM 3 OP1 A A1141 43.754 -3.037 24.694 1.00 43.29 O
ATOM 4 OP2 A A1141 45.945 -3.496 25.937 1.00 42.92 O
ATOM 5 O5' A A1141 44.690 -5.365 24.824 1.00 43.20 O
ATOM 6 C5' A A1141 44.041 -5.963 23.731 1.00 43.50 C
ATOM 7 C4' A A1141 44.169 -7.436 23.815 1.00 43.48 C
ATOM 8 O4' A A1141 45.564 -7.781 23.758 1.00 43.46 O
ATOM 9 C3' A A1141 43.717 -8.044 25.114 1.00 43.16 C
ATOM 10 O3' A A1141 42.324 -8.215 25.172 1.00 43.18 O
ATOM 11 C2' A A1141 44.487 -9.338 25.123 1.00 43.15 C
ATOM 12 O2' A A1141 43.969 -10.184 24.130 1.00 43.44 O
ATOM 13 C1' A A1141 45.827 -8.863 24.612 1.00 43.25 C
ATOM 14 N9 A A1141 46.744 -8.416 25.689 1.00 42.96 N
ATOM 15 C8 A A1141 47.311 -7.188 25.736 1.00 42.93 C
ATOM 16 N7 A A1141 48.115 -7.030 26.754 1.00 42.68 N
ATOM 17 C5 A A1141 48.082 -8.218 27.412 1.00 42.53 C
ATOM 18 C6 A A1141 48.717 -8.596 28.550 1.00 42.27 C
ATOM 19 N6 A A1141 49.487 -7.765 29.205 1.00 42.11 N
ATOM 20 N1 A A1141 48.492 -9.806 29.001 1.00 42.19 N
ATOM 21 C2 A A1141 47.677 -10.570 28.315 1.00 42.37 C
ATOM 22 N3 A A1141 47.011 -10.326 27.219 1.00 42.62 N
ATOM 23 C4 A A1141 47.261 -9.095 26.791 1.00 42.70 C
ATOM 24 P C A1142 41.467 -7.412 26.255 1.00 40.81 P
ATOM 25 OP1 C A1142 40.055 -7.797 26.061 1.00 40.91 O
ATOM 26 OP2 C A1142 41.832 -5.992 26.130 1.00 40.83 O
ATOM 27 O5' C A1142 41.982 -8.005 27.647 1.00 40.46 O
TER
ATOM 1 O3' A B1098 49.924 -13.637 37.968 1.00 37.61 O
ATOM 2 P C B1099 50.603 -13.854 36.539 1.00 31.38 P
ATOM 3 OP1 C B1099 50.517 -15.305 36.226 1.00 31.51 O
ATOM 4 OP2 C B1099 51.947 -13.207 36.599 1.00 31.37 O
ATOM 5 O5' C B1099 49.654 -13.040 35.561 1.00 31.51 O
ATOM 6 C5' C B1099 48.695 -13.705 34.727 1.00 31.69 C
ATOM 7 C4' C B1099 48.523 -12.973 33.437 1.00 31.91 C
ATOM 8 O4' C B1099 48.284 -11.592 33.727 1.00 31.80 O
ATOM 9 C3' C B1099 49.749 -12.955 32.570 1.00 32.09 C
ATOM 10 O3' C B1099 49.858 -14.106 31.738 1.00 32.32 O
ATOM 11 C2' C B1099 49.629 -11.638 31.811 1.00 32.20 C
ATOM 12 O2' C B1099 48.737 -11.765 30.715 1.00 32.43 O
ATOM 13 C1' C B1099 48.969 -10.764 32.848 1.00 31.96 C
ATOM 14 N1 C B1099 49.910 -9.975 33.621 1.00 31.79 N
ATOM 15 C2 C B1099 50.744 -9.081 33.013 1.00 31.90 C
ATOM 16 O2 C B1099 50.690 -9.035 31.784 1.00 32.15 O
ATOM 17 N3 C B1099 51.596 -8.320 33.756 1.00 31.76 N
ATOM 18 C4 C B1099 51.600 -8.413 35.074 1.00 31.51 C
ATOM 19 N4 C B1099 52.423 -7.643 35.752 1.00 31.40 N
ATOM 20 C5 C B1099 50.732 -9.293 35.757 1.00 31.38 C
ATOM 21 C6 C B1099 49.926 -10.037 34.978 1.00 31.53 C
ATOM 22 P C B1100 51.276 -14.760 31.537 1.00 35.35 P
ATOM 23 OP1 C B1100 51.089 -16.049 30.895 1.00 35.55 O
ATOM 24 OP2 C B1100 51.930 -14.701 32.867 1.00 35.08 O
ATOM 25 O5' C B1100 51.983 -13.741 30.530 1.00 35.52 O
TER
Atoms:
OP1: (43.754,-3.037,24.694)
OP2: (45.945,-3.496,25.937)
C3': (43.717,-8.044,25.114)
C1': (45.827,-8.863,24.612)
C5': (44.041,-5.963,23.731)
O4': (45.564,-7.781,23.758)
C8: (47.311,-7.188,25.736)
O2': (43.969,-10.184,24.130)
C6: (48.717,-8.596,28.550)
C5: (48.082,-8.218,27.412)
C4: (47.261,-9.095,26.791)
P: (45.020,-3.818,24.823)
C4': (44.169,-7.436,23.815)
C2': (44.487,-9.338,25.123)
C2: (47.677,-10.570,28.315)
N1: (48.492,-9.806,29.001)
N3: (47.011,-10.326,27.219)
N6: (49.487,-7.765,29.205)
N7: (48.115,-7.030,26.754)
N9: (46.744,-8.416,25.689)
O5': (44.690,-5.365,24.824)
O3': (42.324,-8.215,25.172)
OP2: (45.945,-3.496,25.937)
C3': (43.717,-8.044,25.114)
C1': (45.827,-8.863,24.612)
C5': (44.041,-5.963,23.731)
O4': (45.564,-7.781,23.758)
C8: (47.311,-7.188,25.736)
O2': (43.969,-10.184,24.130)
C6: (48.717,-8.596,28.550)
C5: (48.082,-8.218,27.412)
C4: (47.261,-9.095,26.791)
P: (45.020,-3.818,24.823)
C4': (44.169,-7.436,23.815)
C2': (44.487,-9.338,25.123)
C2: (47.677,-10.570,28.315)
N1: (48.492,-9.806,29.001)
N3: (47.011,-10.326,27.219)
N6: (49.487,-7.765,29.205)
N7: (48.115,-7.030,26.754)
N9: (46.744,-8.416,25.689)
O5': (44.690,-5.365,24.824)
O3': (42.324,-8.215,25.172)
C2: (50.744,-9.081,33.013)
OP1: (50.517,-15.305,36.226)
OP2: (51.947,-13.207,36.599)
C4: (51.600,-8.413,35.074)
O5': (49.654,-13.040,35.561)
C3': (49.749,-12.955,32.570)
C1': (48.969,-10.764,32.848)
O4': (48.284,-11.592,33.727)
C5': (48.695,-13.705,34.727)
P: (50.603,-13.854,36.539)
O2: (50.690,-9.035,31.784)
C4': (48.523,-12.973,33.437)
C2': (49.629,-11.638,31.811)
O2': (48.737,-11.765,30.715)
N1: (49.910,-9.975,33.621)
N3: (51.596,-8.320,33.756)
N4: (52.423,-7.643,35.752)
C6: (49.926,-10.037,34.978)
C5: (50.732,-9.293,35.757)
O3': (49.858,-14.106,31.738)
OP1: (50.517,-15.305,36.226)
OP2: (51.947,-13.207,36.599)
C4: (51.600,-8.413,35.074)
O5': (49.654,-13.040,35.561)
C3': (49.749,-12.955,32.570)
C1': (48.969,-10.764,32.848)
O4': (48.284,-11.592,33.727)
C5': (48.695,-13.705,34.727)
P: (50.603,-13.854,36.539)
O2: (50.690,-9.035,31.784)
C4': (48.523,-12.973,33.437)
C2': (49.629,-11.638,31.811)
O2': (48.737,-11.765,30.715)
N1: (49.910,-9.975,33.621)
N3: (51.596,-8.320,33.756)
N4: (52.423,-7.643,35.752)
C6: (49.926,-10.037,34.978)
C5: (50.732,-9.293,35.757)
O3': (49.858,-14.106,31.738)
Image (generated by PyMOL):