Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01198:02026
Extra
PDB:
ATOM 1 O3' C A1197 36.397 107.613 121.601 1.00 37.52 O
ATOM 2 P G A1198 36.948 108.382 120.299 1.00 35.02 P
ATOM 3 OP1 G A1198 36.752 107.443 119.166 1.00 37.36 O
ATOM 4 OP2 G A1198 38.307 108.900 120.601 1.00 35.81 O
ATOM 5 O5' G A1198 35.979 109.626 120.093 1.00 33.16 O
ATOM 6 C5' G A1198 34.923 109.577 119.127 1.00 33.11 C
ATOM 7 C4' G A1198 34.560 110.968 118.677 1.00 33.53 C
ATOM 8 O4' G A1198 33.559 110.874 117.635 1.00 34.83 O
ATOM 9 C3' G A1198 33.917 111.836 119.738 1.00 33.32 C
ATOM 10 O3' G A1198 34.875 112.486 120.542 1.00 35.29 O
ATOM 11 C2' G A1198 33.096 112.800 118.911 1.00 33.85 C
ATOM 12 O2' G A1198 33.895 113.796 118.314 1.00 33.86 O
ATOM 13 C1' G A1198 32.561 111.857 117.837 1.00 34.52 C
ATOM 14 N9 G A1198 31.342 111.163 118.247 1.00 35.04 N
ATOM 15 C8 G A1198 31.159 109.803 118.339 1.00 34.27 C
ATOM 16 N7 G A1198 29.954 109.473 118.706 1.00 35.88 N
ATOM 17 C5 G A1198 29.302 110.687 118.876 1.00 35.22 C
ATOM 18 C6 G A1198 27.973 110.964 119.265 1.00 35.69 C
ATOM 19 O6 G A1198 27.069 110.163 119.543 1.00 34.43 O
ATOM 20 N1 G A1198 27.732 112.334 119.312 1.00 36.13 N
ATOM 21 C2 G A1198 28.652 113.309 119.016 1.00 35.03 C
ATOM 22 N2 G A1198 28.231 114.579 119.099 1.00 35.30 N
ATOM 23 N3 G A1198 29.893 113.059 118.657 1.00 34.48 N
ATOM 24 C4 G A1198 30.148 111.738 118.604 1.00 34.00 C
ATOM 25 P G A1199 34.654 112.549 122.126 1.00 35.45 P
ATOM 26 OP1 G A1199 35.969 112.843 122.741 1.00 35.20 O
ATOM 27 OP2 G A1199 33.911 111.325 122.522 1.00 34.17 O
ATOM 28 O5' G A1199 33.724 113.821 122.329 1.00 32.40 O
TER
ATOM 1 O3' G B2025 30.854 116.717 117.218 1.00 37.44 O
ATOM 2 P G B2026 30.009 118.003 117.659 1.00 39.32 P
ATOM 3 OP1 G B2026 28.705 117.455 118.122 1.00 41.83 O
ATOM 4 OP2 G B2026 30.028 119.044 116.594 1.00 40.15 O
ATOM 5 O5' G B2026 30.833 118.548 118.906 1.00 37.85 O
ATOM 6 C5' G B2026 30.875 119.940 119.200 1.00 37.68 C
ATOM 7 C4' G B2026 32.186 120.297 119.843 1.00 37.53 C
ATOM 8 O4' G B2026 33.282 119.846 119.003 1.00 38.98 O
ATOM 9 C3' G B2026 32.403 121.791 119.965 1.00 38.43 C
ATOM 10 O3' G B2026 31.737 122.323 121.101 1.00 38.08 O
ATOM 11 C2' G B2026 33.918 121.893 120.015 1.00 38.61 C
ATOM 12 O2' G B2026 34.443 121.552 121.280 1.00 38.38 O
ATOM 13 C1' G B2026 34.313 120.821 118.995 1.00 38.48 C
ATOM 14 N9 G B2026 34.429 121.343 117.635 1.00 39.08 N
ATOM 15 C8 G B2026 33.616 121.051 116.567 1.00 39.26 C
ATOM 16 N7 G B2026 33.955 121.681 115.476 1.00 40.22 N
ATOM 17 C5 G B2026 35.062 122.434 115.843 1.00 40.92 C
ATOM 18 C6 G B2026 35.866 123.327 115.078 1.00 41.09 C
ATOM 19 O6 G B2026 35.748 123.648 113.889 1.00 40.05 O
ATOM 20 N1 G B2026 36.893 123.869 115.843 1.00 41.48 N
ATOM 21 C2 G B2026 37.120 123.596 117.170 1.00 40.75 C
ATOM 22 N2 G B2026 38.172 124.217 117.732 1.00 40.75 N
ATOM 23 N3 G B2026 36.376 122.776 117.894 1.00 39.87 N
ATOM 24 C4 G B2026 35.372 122.233 117.172 1.00 40.10 C
ATOM 25 P A B2027 30.989 123.739 120.992 1.00 37.18 P
ATOM 26 OP1 A B2027 30.156 123.881 122.205 1.00 39.77 O
ATOM 27 OP2 A B2027 30.356 123.863 119.656 1.00 39.22 O
ATOM 28 O5' A B2027 32.181 124.784 121.076 1.00 37.68 O
TER
ATOM 2 P G A1198 36.948 108.382 120.299 1.00 35.02 P
ATOM 3 OP1 G A1198 36.752 107.443 119.166 1.00 37.36 O
ATOM 4 OP2 G A1198 38.307 108.900 120.601 1.00 35.81 O
ATOM 5 O5' G A1198 35.979 109.626 120.093 1.00 33.16 O
ATOM 6 C5' G A1198 34.923 109.577 119.127 1.00 33.11 C
ATOM 7 C4' G A1198 34.560 110.968 118.677 1.00 33.53 C
ATOM 8 O4' G A1198 33.559 110.874 117.635 1.00 34.83 O
ATOM 9 C3' G A1198 33.917 111.836 119.738 1.00 33.32 C
ATOM 10 O3' G A1198 34.875 112.486 120.542 1.00 35.29 O
ATOM 11 C2' G A1198 33.096 112.800 118.911 1.00 33.85 C
ATOM 12 O2' G A1198 33.895 113.796 118.314 1.00 33.86 O
ATOM 13 C1' G A1198 32.561 111.857 117.837 1.00 34.52 C
ATOM 14 N9 G A1198 31.342 111.163 118.247 1.00 35.04 N
ATOM 15 C8 G A1198 31.159 109.803 118.339 1.00 34.27 C
ATOM 16 N7 G A1198 29.954 109.473 118.706 1.00 35.88 N
ATOM 17 C5 G A1198 29.302 110.687 118.876 1.00 35.22 C
ATOM 18 C6 G A1198 27.973 110.964 119.265 1.00 35.69 C
ATOM 19 O6 G A1198 27.069 110.163 119.543 1.00 34.43 O
ATOM 20 N1 G A1198 27.732 112.334 119.312 1.00 36.13 N
ATOM 21 C2 G A1198 28.652 113.309 119.016 1.00 35.03 C
ATOM 22 N2 G A1198 28.231 114.579 119.099 1.00 35.30 N
ATOM 23 N3 G A1198 29.893 113.059 118.657 1.00 34.48 N
ATOM 24 C4 G A1198 30.148 111.738 118.604 1.00 34.00 C
ATOM 25 P G A1199 34.654 112.549 122.126 1.00 35.45 P
ATOM 26 OP1 G A1199 35.969 112.843 122.741 1.00 35.20 O
ATOM 27 OP2 G A1199 33.911 111.325 122.522 1.00 34.17 O
ATOM 28 O5' G A1199 33.724 113.821 122.329 1.00 32.40 O
TER
ATOM 1 O3' G B2025 30.854 116.717 117.218 1.00 37.44 O
ATOM 2 P G B2026 30.009 118.003 117.659 1.00 39.32 P
ATOM 3 OP1 G B2026 28.705 117.455 118.122 1.00 41.83 O
ATOM 4 OP2 G B2026 30.028 119.044 116.594 1.00 40.15 O
ATOM 5 O5' G B2026 30.833 118.548 118.906 1.00 37.85 O
ATOM 6 C5' G B2026 30.875 119.940 119.200 1.00 37.68 C
ATOM 7 C4' G B2026 32.186 120.297 119.843 1.00 37.53 C
ATOM 8 O4' G B2026 33.282 119.846 119.003 1.00 38.98 O
ATOM 9 C3' G B2026 32.403 121.791 119.965 1.00 38.43 C
ATOM 10 O3' G B2026 31.737 122.323 121.101 1.00 38.08 O
ATOM 11 C2' G B2026 33.918 121.893 120.015 1.00 38.61 C
ATOM 12 O2' G B2026 34.443 121.552 121.280 1.00 38.38 O
ATOM 13 C1' G B2026 34.313 120.821 118.995 1.00 38.48 C
ATOM 14 N9 G B2026 34.429 121.343 117.635 1.00 39.08 N
ATOM 15 C8 G B2026 33.616 121.051 116.567 1.00 39.26 C
ATOM 16 N7 G B2026 33.955 121.681 115.476 1.00 40.22 N
ATOM 17 C5 G B2026 35.062 122.434 115.843 1.00 40.92 C
ATOM 18 C6 G B2026 35.866 123.327 115.078 1.00 41.09 C
ATOM 19 O6 G B2026 35.748 123.648 113.889 1.00 40.05 O
ATOM 20 N1 G B2026 36.893 123.869 115.843 1.00 41.48 N
ATOM 21 C2 G B2026 37.120 123.596 117.170 1.00 40.75 C
ATOM 22 N2 G B2026 38.172 124.217 117.732 1.00 40.75 N
ATOM 23 N3 G B2026 36.376 122.776 117.894 1.00 39.87 N
ATOM 24 C4 G B2026 35.372 122.233 117.172 1.00 40.10 C
ATOM 25 P A B2027 30.989 123.739 120.992 1.00 37.18 P
ATOM 26 OP1 A B2027 30.156 123.881 122.205 1.00 39.77 O
ATOM 27 OP2 A B2027 30.356 123.863 119.656 1.00 39.22 O
ATOM 28 O5' A B2027 32.181 124.784 121.076 1.00 37.68 O
TER
Atoms:
OP1: (36.752,107.443,119.166)
OP2: (38.307,108.900,120.601)
C3': (33.917,111.836,119.738)
C1': (32.561,111.857,117.837)
C5': (34.923,109.577,119.127)
O6: (27.069,110.163,119.543)
O4': (33.559,110.874,117.635)
C8: (31.159,109.803,118.339)
C2: (28.652,113.309,119.016)
C6: (27.973,110.964,119.265)
C5: (29.302,110.687,118.876)
C4: (30.148,111.738,118.604)
P: (36.948,108.382,120.299)
C4': (34.560,110.968,118.677)
C2': (33.096,112.800,118.911)
O2': (33.895,113.796,118.314)
N1: (27.732,112.334,119.312)
N2: (28.231,114.579,119.099)
N3: (29.893,113.059,118.657)
N7: (29.954,109.473,118.706)
N9: (31.342,111.163,118.247)
O5': (35.979,109.626,120.093)
O3': (34.875,112.486,120.542)
OP2: (38.307,108.900,120.601)
C3': (33.917,111.836,119.738)
C1': (32.561,111.857,117.837)
C5': (34.923,109.577,119.127)
O6: (27.069,110.163,119.543)
O4': (33.559,110.874,117.635)
C8: (31.159,109.803,118.339)
C2: (28.652,113.309,119.016)
C6: (27.973,110.964,119.265)
C5: (29.302,110.687,118.876)
C4: (30.148,111.738,118.604)
P: (36.948,108.382,120.299)
C4': (34.560,110.968,118.677)
C2': (33.096,112.800,118.911)
O2': (33.895,113.796,118.314)
N1: (27.732,112.334,119.312)
N2: (28.231,114.579,119.099)
N3: (29.893,113.059,118.657)
N7: (29.954,109.473,118.706)
N9: (31.342,111.163,118.247)
O5': (35.979,109.626,120.093)
O3': (34.875,112.486,120.542)
OP1: (28.705,117.455,118.122)
OP2: (30.028,119.044,116.594)
C3': (32.403,121.791,119.965)
C1': (34.313,120.821,118.995)
C5': (30.875,119.940,119.200)
O6: (35.748,123.648,113.889)
O4': (33.282,119.846,119.003)
C8: (33.616,121.051,116.567)
C2: (37.120,123.596,117.170)
C6: (35.866,123.327,115.078)
C5: (35.062,122.434,115.843)
C4: (35.372,122.233,117.172)
P: (30.009,118.003,117.659)
C4': (32.186,120.297,119.843)
C2': (33.918,121.893,120.015)
O2': (34.443,121.552,121.280)
N1: (36.893,123.869,115.843)
N2: (38.172,124.217,117.732)
N3: (36.376,122.776,117.894)
N7: (33.955,121.681,115.476)
N9: (34.429,121.343,117.635)
O5': (30.833,118.548,118.906)
O3': (31.737,122.323,121.101)
OP2: (30.028,119.044,116.594)
C3': (32.403,121.791,119.965)
C1': (34.313,120.821,118.995)
C5': (30.875,119.940,119.200)
O6: (35.748,123.648,113.889)
O4': (33.282,119.846,119.003)
C8: (33.616,121.051,116.567)
C2: (37.120,123.596,117.170)
C6: (35.866,123.327,115.078)
C5: (35.062,122.434,115.843)
C4: (35.372,122.233,117.172)
P: (30.009,118.003,117.659)
C4': (32.186,120.297,119.843)
C2': (33.918,121.893,120.015)
O2': (34.443,121.552,121.280)
N1: (36.893,123.869,115.843)
N2: (38.172,124.217,117.732)
N3: (36.376,122.776,117.894)
N7: (33.955,121.681,115.476)
N9: (34.429,121.343,117.635)
O5': (30.833,118.548,118.906)
O3': (31.737,122.323,121.101)
Image (generated by PyMOL):