Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11022:11023
Extra
PDB:
ATOM 1 O3' U A1021 44.603 -83.383 47.464 1.00 58.45 O
ATOM 2 P U A1022 43.998 -84.859 47.275 1.00 66.38 P
ATOM 3 OP1 U A1022 42.580 -84.698 46.915 1.00 66.33 O
ATOM 4 OP2 U A1022 44.328 -85.632 48.494 1.00 66.59 O
ATOM 5 O5' U A1022 44.802 -85.422 46.028 1.00 66.85 O
ATOM 6 C5' U A1022 44.399 -85.091 44.715 1.00 66.88 C
ATOM 7 C4' U A1022 45.262 -85.757 43.677 1.00 67.39 C
ATOM 8 O4' U A1022 46.660 -85.646 44.033 1.00 67.31 O
ATOM 9 C3' U A1022 45.048 -87.240 43.481 1.00 68.15 C
ATOM 10 O3' U A1022 43.948 -87.500 42.660 1.00 68.39 O
ATOM 11 C2' U A1022 46.360 -87.694 42.863 1.00 68.51 C
ATOM 12 O2' U A1022 46.366 -87.425 41.465 1.00 68.62 O
ATOM 13 C1' U A1022 47.366 -86.771 43.554 1.00 67.97 C
ATOM 14 N1 U A1022 48.008 -87.416 44.697 1.00 68.13 N
ATOM 15 C2 U A1022 49.000 -88.358 44.508 1.00 68.68 C
ATOM 16 O2 U A1022 49.399 -88.721 43.414 1.00 69.05 O
ATOM 17 N3 U A1022 49.498 -88.878 45.678 1.00 68.79 N
ATOM 18 C4 U A1022 49.121 -88.528 46.972 1.00 68.41 C
ATOM 19 O4 U A1022 49.665 -89.070 47.948 1.00 68.58 O
ATOM 20 C5 U A1022 48.095 -87.534 47.062 1.00 67.85 C
ATOM 21 C6 U A1022 47.598 -87.035 45.943 1.00 67.74 C
ATOM 22 P A A1023 42.702 -88.312 43.221 1.00 67.95 P
ATOM 23 OP1 A A1023 41.542 -87.933 42.357 1.00 67.89 O
ATOM 24 OP2 A A1023 42.631 -88.068 44.693 1.00 67.58 O
ATOM 25 O5' A A1023 43.118 -89.817 42.945 1.00 68.77 O
TER
ATOM 1 O3' U B1022 43.948 -87.500 42.660 1.00 68.39 O
ATOM 2 P A B1023 42.702 -88.312 43.221 1.00 67.95 P
ATOM 3 OP1 A B1023 41.542 -87.933 42.357 1.00 67.89 O
ATOM 4 OP2 A B1023 42.631 -88.068 44.693 1.00 67.58 O
ATOM 5 O5' A B1023 43.118 -89.817 42.945 1.00 68.77 O
ATOM 6 C5' A B1023 43.067 -90.793 43.958 1.00 69.11 C
ATOM 7 C4' A B1023 43.684 -92.069 43.472 1.00 69.87 C
ATOM 8 O4' A B1023 43.333 -92.266 42.085 1.00 70.21 O
ATOM 9 C3' A B1023 45.205 -92.116 43.481 1.00 69.93 C
ATOM 10 O3' A B1023 45.719 -92.492 44.743 1.00 69.94 O
ATOM 11 C2' A B1023 45.541 -93.112 42.370 1.00 70.66 C
ATOM 12 O2' A B1023 45.474 -94.446 42.858 1.00 71.30 O
ATOM 13 C1' A B1023 44.382 -92.908 41.399 1.00 70.69 C
ATOM 14 N9 A B1023 44.741 -92.097 40.231 1.00 70.48 N
ATOM 15 C8 A B1023 44.240 -90.867 39.926 1.00 69.88 C
ATOM 16 N7 A B1023 44.672 -90.382 38.790 1.00 69.85 N
ATOM 17 C5 A B1023 45.502 -91.373 38.308 1.00 70.48 C
ATOM 18 C6 A B1023 46.257 -91.451 37.134 1.00 70.78 C
ATOM 19 N6 A B1023 46.291 -90.481 36.227 1.00 70.46 N
ATOM 20 N1 A B1023 46.975 -92.578 36.936 1.00 71.44 N
ATOM 21 C2 A B1023 46.918 -93.554 37.871 1.00 71.78 C
ATOM 22 N3 A B1023 46.237 -93.603 39.024 1.00 71.56 N
ATOM 23 C4 A B1023 45.541 -92.455 39.180 1.00 70.89 C
ATOM 24 P A B1024 46.825 -91.586 45.460 1.00 70.33 P
ATOM 25 OP1 A B1024 47.029 -92.148 46.830 1.00 70.43 O
ATOM 26 OP2 A B1024 46.393 -90.154 45.327 1.00 69.58 O
ATOM 27 O5' A B1024 48.112 -91.860 44.564 1.00 70.66 O
TER
ATOM 2 P U A1022 43.998 -84.859 47.275 1.00 66.38 P
ATOM 3 OP1 U A1022 42.580 -84.698 46.915 1.00 66.33 O
ATOM 4 OP2 U A1022 44.328 -85.632 48.494 1.00 66.59 O
ATOM 5 O5' U A1022 44.802 -85.422 46.028 1.00 66.85 O
ATOM 6 C5' U A1022 44.399 -85.091 44.715 1.00 66.88 C
ATOM 7 C4' U A1022 45.262 -85.757 43.677 1.00 67.39 C
ATOM 8 O4' U A1022 46.660 -85.646 44.033 1.00 67.31 O
ATOM 9 C3' U A1022 45.048 -87.240 43.481 1.00 68.15 C
ATOM 10 O3' U A1022 43.948 -87.500 42.660 1.00 68.39 O
ATOM 11 C2' U A1022 46.360 -87.694 42.863 1.00 68.51 C
ATOM 12 O2' U A1022 46.366 -87.425 41.465 1.00 68.62 O
ATOM 13 C1' U A1022 47.366 -86.771 43.554 1.00 67.97 C
ATOM 14 N1 U A1022 48.008 -87.416 44.697 1.00 68.13 N
ATOM 15 C2 U A1022 49.000 -88.358 44.508 1.00 68.68 C
ATOM 16 O2 U A1022 49.399 -88.721 43.414 1.00 69.05 O
ATOM 17 N3 U A1022 49.498 -88.878 45.678 1.00 68.79 N
ATOM 18 C4 U A1022 49.121 -88.528 46.972 1.00 68.41 C
ATOM 19 O4 U A1022 49.665 -89.070 47.948 1.00 68.58 O
ATOM 20 C5 U A1022 48.095 -87.534 47.062 1.00 67.85 C
ATOM 21 C6 U A1022 47.598 -87.035 45.943 1.00 67.74 C
ATOM 22 P A A1023 42.702 -88.312 43.221 1.00 67.95 P
ATOM 23 OP1 A A1023 41.542 -87.933 42.357 1.00 67.89 O
ATOM 24 OP2 A A1023 42.631 -88.068 44.693 1.00 67.58 O
ATOM 25 O5' A A1023 43.118 -89.817 42.945 1.00 68.77 O
TER
ATOM 1 O3' U B1022 43.948 -87.500 42.660 1.00 68.39 O
ATOM 2 P A B1023 42.702 -88.312 43.221 1.00 67.95 P
ATOM 3 OP1 A B1023 41.542 -87.933 42.357 1.00 67.89 O
ATOM 4 OP2 A B1023 42.631 -88.068 44.693 1.00 67.58 O
ATOM 5 O5' A B1023 43.118 -89.817 42.945 1.00 68.77 O
ATOM 6 C5' A B1023 43.067 -90.793 43.958 1.00 69.11 C
ATOM 7 C4' A B1023 43.684 -92.069 43.472 1.00 69.87 C
ATOM 8 O4' A B1023 43.333 -92.266 42.085 1.00 70.21 O
ATOM 9 C3' A B1023 45.205 -92.116 43.481 1.00 69.93 C
ATOM 10 O3' A B1023 45.719 -92.492 44.743 1.00 69.94 O
ATOM 11 C2' A B1023 45.541 -93.112 42.370 1.00 70.66 C
ATOM 12 O2' A B1023 45.474 -94.446 42.858 1.00 71.30 O
ATOM 13 C1' A B1023 44.382 -92.908 41.399 1.00 70.69 C
ATOM 14 N9 A B1023 44.741 -92.097 40.231 1.00 70.48 N
ATOM 15 C8 A B1023 44.240 -90.867 39.926 1.00 69.88 C
ATOM 16 N7 A B1023 44.672 -90.382 38.790 1.00 69.85 N
ATOM 17 C5 A B1023 45.502 -91.373 38.308 1.00 70.48 C
ATOM 18 C6 A B1023 46.257 -91.451 37.134 1.00 70.78 C
ATOM 19 N6 A B1023 46.291 -90.481 36.227 1.00 70.46 N
ATOM 20 N1 A B1023 46.975 -92.578 36.936 1.00 71.44 N
ATOM 21 C2 A B1023 46.918 -93.554 37.871 1.00 71.78 C
ATOM 22 N3 A B1023 46.237 -93.603 39.024 1.00 71.56 N
ATOM 23 C4 A B1023 45.541 -92.455 39.180 1.00 70.89 C
ATOM 24 P A B1024 46.825 -91.586 45.460 1.00 70.33 P
ATOM 25 OP1 A B1024 47.029 -92.148 46.830 1.00 70.43 O
ATOM 26 OP2 A B1024 46.393 -90.154 45.327 1.00 69.58 O
ATOM 27 O5' A B1024 48.112 -91.860 44.564 1.00 70.66 O
TER
Atoms:
C4: (49.121,-88.528,46.972)
N3: (49.498,-88.878,45.678)
OP1: (42.580,-84.698,46.915)
OP2: (44.328,-85.632,48.494)
C2: (49.000,-88.358,44.508)
C1': (47.366,-86.771,43.554)
C3': (45.048,-87.240,43.481)
O5': (44.802,-85.422,46.028)
O4': (46.660,-85.646,44.033)
C5': (44.399,-85.091,44.715)
P: (43.998,-84.859,47.275)
C4': (45.262,-85.757,43.677)
C2': (46.360,-87.694,42.863)
O2': (46.366,-87.425,41.465)
N1: (48.008,-87.416,44.697)
O4: (49.665,-89.070,47.948)
O2: (49.399,-88.721,43.414)
C6: (47.598,-87.035,45.943)
C5: (48.095,-87.534,47.062)
O3': (43.948,-87.500,42.660)
N3: (49.498,-88.878,45.678)
OP1: (42.580,-84.698,46.915)
OP2: (44.328,-85.632,48.494)
C2: (49.000,-88.358,44.508)
C1': (47.366,-86.771,43.554)
C3': (45.048,-87.240,43.481)
O5': (44.802,-85.422,46.028)
O4': (46.660,-85.646,44.033)
C5': (44.399,-85.091,44.715)
P: (43.998,-84.859,47.275)
C4': (45.262,-85.757,43.677)
C2': (46.360,-87.694,42.863)
O2': (46.366,-87.425,41.465)
N1: (48.008,-87.416,44.697)
O4: (49.665,-89.070,47.948)
O2: (49.399,-88.721,43.414)
C6: (47.598,-87.035,45.943)
C5: (48.095,-87.534,47.062)
O3': (43.948,-87.500,42.660)
OP1: (41.542,-87.933,42.357)
OP2: (42.631,-88.068,44.693)
C3': (45.205,-92.116,43.481)
C1': (44.382,-92.908,41.399)
C5': (43.067,-90.793,43.958)
O4': (43.333,-92.266,42.085)
C8: (44.240,-90.867,39.926)
O2': (45.474,-94.446,42.858)
C6: (46.257,-91.451,37.134)
C5: (45.502,-91.373,38.308)
C4: (45.541,-92.455,39.180)
P: (42.702,-88.312,43.221)
C4': (43.684,-92.069,43.472)
C2': (45.541,-93.112,42.370)
C2: (46.918,-93.554,37.871)
N1: (46.975,-92.578,36.936)
N3: (46.237,-93.603,39.024)
N6: (46.291,-90.481,36.227)
N7: (44.672,-90.382,38.790)
N9: (44.741,-92.097,40.231)
O5': (43.118,-89.817,42.945)
O3': (45.719,-92.492,44.743)
OP2: (42.631,-88.068,44.693)
C3': (45.205,-92.116,43.481)
C1': (44.382,-92.908,41.399)
C5': (43.067,-90.793,43.958)
O4': (43.333,-92.266,42.085)
C8: (44.240,-90.867,39.926)
O2': (45.474,-94.446,42.858)
C6: (46.257,-91.451,37.134)
C5: (45.502,-91.373,38.308)
C4: (45.541,-92.455,39.180)
P: (42.702,-88.312,43.221)
C4': (43.684,-92.069,43.472)
C2': (45.541,-93.112,42.370)
C2: (46.918,-93.554,37.871)
N1: (46.975,-92.578,36.936)
N3: (46.237,-93.603,39.024)
N6: (46.291,-90.481,36.227)
N7: (44.672,-90.382,38.790)
N9: (44.741,-92.097,40.231)
O5': (43.118,-89.817,42.945)
O3': (45.719,-92.492,44.743)
Image (generated by PyMOL):