ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A573:A106

Extra

PDB:
ATOM 1 O3' U A 572 38.540 37.686 67.770 1.00 83.09 O
ATOM 2 P G A 573 39.873 36.992 68.380 1.00 89.55 P
ATOM 3 OP1 G A 573 39.739 36.901 69.861 1.00 79.10 O
ATOM 4 OP2 G A 573 41.054 37.693 67.803 1.00 90.03 O
ATOM 5 O5' G A 573 39.855 35.494 67.819 1.00 84.79 O
ATOM 6 C5' G A 573 39.217 34.462 68.570 1.00 78.19 C
ATOM 7 C4' G A 573 38.883 33.275 67.702 1.00 80.52 C
ATOM 8 O4' G A 573 38.323 33.747 66.451 1.00 80.73 O
ATOM 9 C3' G A 573 40.034 32.382 67.281 1.00 82.15 C
ATOM 10 O3' G A 573 40.337 31.424 68.281 1.00 73.94 O
ATOM 11 C2' G A 573 39.487 31.726 66.027 1.00 84.94 C
ATOM 12 O2' G A 573 38.608 30.660 66.332 1.00 90.46 O
ATOM 13 C1' G A 573 38.718 32.886 65.400 1.00 83.20 C
ATOM 14 N9 G A 573 39.619 33.627 64.530 1.00 85.08 N
ATOM 15 C8 G A 573 40.141 34.876 64.744 1.00 89.10 C
ATOM 16 N7 G A 573 40.943 35.261 63.794 1.00 91.00 N
ATOM 17 C5 G A 573 40.944 34.207 62.899 1.00 90.16 C
ATOM 18 C6 G A 573 41.625 34.052 61.676 1.00 90.22 C
ATOM 19 O6 G A 573 42.380 34.856 61.108 1.00 93.92 O
ATOM 20 N1 G A 573 41.355 32.816 61.094 1.00 86.93 N
ATOM 21 C2 G A 573 40.531 31.859 61.629 1.00 88.19 C
ATOM 22 N2 G A 573 40.410 30.728 60.927 1.00 90.73 N
ATOM 23 N3 G A 573 39.880 32.001 62.766 1.00 85.72 N
ATOM 24 C4 G A 573 40.131 33.191 63.342 1.00 87.66 C
ATOM 25 P U A 574 41.855 31.268 68.780 1.00 77.56 P
ATOM 26 OP1 U A 574 41.820 30.480 70.046 1.00 71.23 O
ATOM 27 OP2 U A 574 42.451 32.633 68.784 1.00 79.48 O
ATOM 28 O5' U A 574 42.566 30.440 67.613 1.00 85.60 O
TER

ATOM 1 O3' G B 105 40.731 27.866 59.726 1.00 75.85 O
ATOM 2 P G B 106 39.452 27.420 60.577 1.00 75.09 P
ATOM 3 OP1 G B 106 38.950 28.603 61.307 1.00 84.60 O
ATOM 4 OP2 G B 106 39.876 26.226 61.344 1.00 70.63 O
ATOM 5 O5' G B 106 38.393 27.015 59.449 1.00 73.16 O
ATOM 6 C5' G B 106 37.373 26.053 59.701 1.00 79.48 C
ATOM 7 C4' G B 106 36.846 25.459 58.403 1.00 81.08 C
ATOM 8 O4' G B 106 37.914 24.735 57.725 1.00 83.52 O
ATOM 9 C3' G B 106 35.771 24.395 58.610 1.00 86.48 C
ATOM 10 O3' G B 106 34.459 24.892 58.830 1.00 89.07 O
ATOM 11 C2' G B 106 35.895 23.501 57.378 1.00 89.40 C
ATOM 12 O2' G B 106 35.193 23.883 56.210 1.00 90.59 O
ATOM 13 C1' G B 106 37.398 23.540 57.134 1.00 87.16 C
ATOM 14 N9 G B 106 38.002 22.374 57.775 1.00 87.98 N
ATOM 15 C8 G B 106 38.923 22.348 58.797 1.00 86.44 C
ATOM 16 N7 G B 106 39.266 21.139 59.149 1.00 79.82 N
ATOM 17 C5 G B 106 38.529 20.316 58.311 1.00 83.76 C
ATOM 18 C6 G B 106 38.493 18.894 58.209 1.00 84.80 C
ATOM 19 O6 G B 106 39.136 18.051 58.861 1.00 81.60 O
ATOM 20 N1 G B 106 37.604 18.478 57.221 1.00 84.35 N
ATOM 21 C2 G B 106 36.852 19.317 56.423 1.00 83.75 C
ATOM 22 N2 G B 106 36.062 18.719 55.514 1.00 84.39 N
ATOM 23 N3 G B 106 36.879 20.639 56.506 1.00 79.99 N
ATOM 24 C4 G B 106 37.736 21.064 57.462 1.00 84.26 C
ATOM 25 P G B 107 33.446 24.049 59.756 1.00 83.39 P
ATOM 26 OP1 G B 107 32.254 24.900 60.014 1.00 81.02 O
ATOM 27 OP2 G B 107 34.219 23.489 60.915 1.00 66.23 O
ATOM 28 O5' G B 107 33.045 22.804 58.836 1.00 85.65 O
TER

Atoms:
OP1: (39.739,36.901,69.861)
OP2: (41.054,37.693,67.803)
C3': (40.034,32.382,67.281)
C1': (38.718,32.886,65.400)
C5': (39.217,34.462,68.570)
O6: (42.380,34.856,61.108)
O4': (38.323,33.747,66.451)
C8: (40.141,34.876,64.744)
C2: (40.531,31.859,61.629)
C6: (41.625,34.052,61.676)
C5: (40.944,34.207,62.899)
C4: (40.131,33.191,63.342)
P: (39.873,36.992,68.380)
C4': (38.883,33.275,67.702)
C2': (39.487,31.726,66.027)
O2': (38.608,30.660,66.332)
N1: (41.355,32.816,61.094)
N2: (40.410,30.728,60.927)
N3: (39.880,32.001,62.766)
N7: (40.943,35.261,63.794)
N9: (39.619,33.627,64.530)
O5': (39.855,35.494,67.819)
O3': (40.337,31.424,68.281)
OP1: (38.950,28.603,61.307)
OP2: (39.876,26.226,61.344)
C3': (35.771,24.395,58.610)
C1': (37.398,23.540,57.134)
C5': (37.373,26.053,59.701)
O6: (39.136,18.051,58.861)
O4': (37.914,24.735,57.725)
C8: (38.923,22.348,58.797)
C2: (36.852,19.317,56.423)
C6: (38.493,18.894,58.209)
C5: (38.529,20.316,58.311)
C4: (37.736,21.064,57.462)
P: (39.452,27.420,60.577)
C4': (36.846,25.459,58.403)
C2': (35.895,23.501,57.378)
O2': (35.193,23.883,56.210)
N1: (37.604,18.478,57.221)
N2: (36.062,18.719,55.514)
N3: (36.879,20.639,56.506)
N7: (39.266,21.139,59.149)
N9: (38.002,22.374,57.775)
O5': (38.393,27.015,59.449)
O3': (34.459,24.892,58.830)
Image (generated by PyMOL):
PyMOL image
show in jmol