Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01083:01042
Extra
PDB:
ATOM 1 O3' A A1082 36.364 100.704 121.013 1.00 52.42 O
ATOM 2 P A A1083 35.289 99.832 120.189 1.00 52.99 P
ATOM 3 OP1 A A1083 35.627 100.021 118.751 1.00 49.91 O
ATOM 4 OP2 A A1083 33.907 100.138 120.670 1.00 53.14 O
ATOM 5 O5' A A1083 35.592 98.334 120.640 1.00 51.44 O
ATOM 6 C5' A A1083 36.760 97.652 120.184 1.00 46.77 C
ATOM 7 C4' A A1083 36.416 96.244 119.782 1.00 44.35 C
ATOM 8 O4' A A1083 35.142 96.207 119.096 1.00 44.38 O
ATOM 9 C3' A A1083 37.402 95.677 118.793 1.00 44.25 C
ATOM 10 O3' A A1083 38.520 95.164 119.478 1.00 44.27 O
ATOM 11 C2' A A1083 36.575 94.644 118.044 1.00 43.66 C
ATOM 12 O2' A A1083 36.408 93.449 118.775 1.00 44.66 O
ATOM 13 C1' A A1083 35.232 95.367 117.956 1.00 42.86 C
ATOM 14 N9 A A1083 35.070 96.220 116.775 1.00 41.44 N
ATOM 15 C8 A A1083 34.723 97.550 116.776 1.00 40.99 C
ATOM 16 N7 A A1083 34.610 98.068 115.581 1.00 40.82 N
ATOM 17 C5 A A1083 34.912 97.015 114.734 1.00 38.05 C
ATOM 18 C6 A A1083 34.955 96.922 113.350 1.00 37.57 C
ATOM 19 N6 A A1083 34.697 97.946 112.539 1.00 38.36 N
ATOM 20 N1 A A1083 35.276 95.731 112.811 1.00 36.99 N
ATOM 21 C2 A A1083 35.542 94.713 113.625 1.00 37.23 C
ATOM 22 N3 A A1083 35.539 94.677 114.951 1.00 40.03 N
ATOM 23 C4 A A1083 35.207 95.874 115.453 1.00 39.19 C
ATOM 24 P U A1084 39.940 95.856 119.276 1.00 41.91 P
ATOM 25 OP1 U A1084 40.901 95.126 120.128 1.00 43.99 O
ATOM 26 OP2 U A1084 39.759 97.301 119.453 1.00 42.56 O
ATOM 27 O5' U A1084 40.266 95.591 117.743 1.00 42.35 O
TER
ATOM 1 O3' A B1041 38.179 96.020 103.451 1.00 42.13 O
ATOM 2 P C B1042 38.888 94.972 104.451 1.00 43.58 P
ATOM 3 OP1 C B1042 40.363 95.106 104.353 1.00 45.28 O
ATOM 4 OP2 C B1042 38.264 93.651 104.206 1.00 42.26 O
ATOM 5 O5' C B1042 38.469 95.457 105.911 1.00 43.41 O
ATOM 6 C5' C B1042 38.934 94.741 107.082 1.00 41.79 C
ATOM 7 C4' C B1042 38.001 94.956 108.261 1.00 40.34 C
ATOM 8 O4' C B1042 38.053 96.334 108.707 1.00 40.28 O
ATOM 9 C3' C B1042 36.523 94.722 108.018 1.00 39.95 C
ATOM 10 O3' C B1042 36.179 93.355 108.049 1.00 41.18 O
ATOM 11 C2' C B1042 35.891 95.494 109.160 1.00 39.31 C
ATOM 12 O2' C B1042 36.027 94.831 110.394 1.00 39.63 O
ATOM 13 C1' C B1042 36.779 96.731 109.194 1.00 39.66 C
ATOM 14 N1 C B1042 36.260 97.809 108.333 1.00 39.88 N
ATOM 15 C2 C B1042 35.083 98.453 108.697 1.00 39.06 C
ATOM 16 O2 C B1042 34.481 98.072 109.700 1.00 40.07 O
ATOM 17 N3 C B1042 34.630 99.471 107.945 1.00 39.20 N
ATOM 18 C4 C B1042 35.299 99.845 106.858 1.00 39.51 C
ATOM 19 N4 C B1042 34.835 100.879 106.163 1.00 41.12 N
ATOM 20 C5 C B1042 36.480 99.184 106.439 1.00 39.48 C
ATOM 21 C6 C B1042 36.924 98.183 107.198 1.00 39.75 C
ATOM 22 P C B1043 34.945 92.849 107.172 1.00 42.28 P
ATOM 23 OP1 C B1043 34.941 91.361 107.152 1.00 41.39 O
ATOM 24 OP2 C B1043 34.993 93.608 105.904 1.00 40.44 O
ATOM 25 O5' C B1043 33.684 93.322 108.011 1.00 40.05 O
TER
ATOM 2 P A A1083 35.289 99.832 120.189 1.00 52.99 P
ATOM 3 OP1 A A1083 35.627 100.021 118.751 1.00 49.91 O
ATOM 4 OP2 A A1083 33.907 100.138 120.670 1.00 53.14 O
ATOM 5 O5' A A1083 35.592 98.334 120.640 1.00 51.44 O
ATOM 6 C5' A A1083 36.760 97.652 120.184 1.00 46.77 C
ATOM 7 C4' A A1083 36.416 96.244 119.782 1.00 44.35 C
ATOM 8 O4' A A1083 35.142 96.207 119.096 1.00 44.38 O
ATOM 9 C3' A A1083 37.402 95.677 118.793 1.00 44.25 C
ATOM 10 O3' A A1083 38.520 95.164 119.478 1.00 44.27 O
ATOM 11 C2' A A1083 36.575 94.644 118.044 1.00 43.66 C
ATOM 12 O2' A A1083 36.408 93.449 118.775 1.00 44.66 O
ATOM 13 C1' A A1083 35.232 95.367 117.956 1.00 42.86 C
ATOM 14 N9 A A1083 35.070 96.220 116.775 1.00 41.44 N
ATOM 15 C8 A A1083 34.723 97.550 116.776 1.00 40.99 C
ATOM 16 N7 A A1083 34.610 98.068 115.581 1.00 40.82 N
ATOM 17 C5 A A1083 34.912 97.015 114.734 1.00 38.05 C
ATOM 18 C6 A A1083 34.955 96.922 113.350 1.00 37.57 C
ATOM 19 N6 A A1083 34.697 97.946 112.539 1.00 38.36 N
ATOM 20 N1 A A1083 35.276 95.731 112.811 1.00 36.99 N
ATOM 21 C2 A A1083 35.542 94.713 113.625 1.00 37.23 C
ATOM 22 N3 A A1083 35.539 94.677 114.951 1.00 40.03 N
ATOM 23 C4 A A1083 35.207 95.874 115.453 1.00 39.19 C
ATOM 24 P U A1084 39.940 95.856 119.276 1.00 41.91 P
ATOM 25 OP1 U A1084 40.901 95.126 120.128 1.00 43.99 O
ATOM 26 OP2 U A1084 39.759 97.301 119.453 1.00 42.56 O
ATOM 27 O5' U A1084 40.266 95.591 117.743 1.00 42.35 O
TER
ATOM 1 O3' A B1041 38.179 96.020 103.451 1.00 42.13 O
ATOM 2 P C B1042 38.888 94.972 104.451 1.00 43.58 P
ATOM 3 OP1 C B1042 40.363 95.106 104.353 1.00 45.28 O
ATOM 4 OP2 C B1042 38.264 93.651 104.206 1.00 42.26 O
ATOM 5 O5' C B1042 38.469 95.457 105.911 1.00 43.41 O
ATOM 6 C5' C B1042 38.934 94.741 107.082 1.00 41.79 C
ATOM 7 C4' C B1042 38.001 94.956 108.261 1.00 40.34 C
ATOM 8 O4' C B1042 38.053 96.334 108.707 1.00 40.28 O
ATOM 9 C3' C B1042 36.523 94.722 108.018 1.00 39.95 C
ATOM 10 O3' C B1042 36.179 93.355 108.049 1.00 41.18 O
ATOM 11 C2' C B1042 35.891 95.494 109.160 1.00 39.31 C
ATOM 12 O2' C B1042 36.027 94.831 110.394 1.00 39.63 O
ATOM 13 C1' C B1042 36.779 96.731 109.194 1.00 39.66 C
ATOM 14 N1 C B1042 36.260 97.809 108.333 1.00 39.88 N
ATOM 15 C2 C B1042 35.083 98.453 108.697 1.00 39.06 C
ATOM 16 O2 C B1042 34.481 98.072 109.700 1.00 40.07 O
ATOM 17 N3 C B1042 34.630 99.471 107.945 1.00 39.20 N
ATOM 18 C4 C B1042 35.299 99.845 106.858 1.00 39.51 C
ATOM 19 N4 C B1042 34.835 100.879 106.163 1.00 41.12 N
ATOM 20 C5 C B1042 36.480 99.184 106.439 1.00 39.48 C
ATOM 21 C6 C B1042 36.924 98.183 107.198 1.00 39.75 C
ATOM 22 P C B1043 34.945 92.849 107.172 1.00 42.28 P
ATOM 23 OP1 C B1043 34.941 91.361 107.152 1.00 41.39 O
ATOM 24 OP2 C B1043 34.993 93.608 105.904 1.00 40.44 O
ATOM 25 O5' C B1043 33.684 93.322 108.011 1.00 40.05 O
TER
Atoms:
OP1: (35.627,100.021,118.751)
OP2: (33.907,100.138,120.670)
C3': (37.402,95.677,118.793)
C1': (35.232,95.367,117.956)
C5': (36.760,97.652,120.184)
O4': (35.142,96.207,119.096)
C8: (34.723,97.550,116.776)
O2': (36.408,93.449,118.775)
C6: (34.955,96.922,113.350)
C5: (34.912,97.015,114.734)
C4: (35.207,95.874,115.453)
P: (35.289,99.832,120.189)
C4': (36.416,96.244,119.782)
C2': (36.575,94.644,118.044)
C2: (35.542,94.713,113.625)
N1: (35.276,95.731,112.811)
N3: (35.539,94.677,114.951)
N6: (34.697,97.946,112.539)
N7: (34.610,98.068,115.581)
N9: (35.070,96.220,116.775)
O5': (35.592,98.334,120.640)
O3': (38.520,95.164,119.478)
OP2: (33.907,100.138,120.670)
C3': (37.402,95.677,118.793)
C1': (35.232,95.367,117.956)
C5': (36.760,97.652,120.184)
O4': (35.142,96.207,119.096)
C8: (34.723,97.550,116.776)
O2': (36.408,93.449,118.775)
C6: (34.955,96.922,113.350)
C5: (34.912,97.015,114.734)
C4: (35.207,95.874,115.453)
P: (35.289,99.832,120.189)
C4': (36.416,96.244,119.782)
C2': (36.575,94.644,118.044)
C2: (35.542,94.713,113.625)
N1: (35.276,95.731,112.811)
N3: (35.539,94.677,114.951)
N6: (34.697,97.946,112.539)
N7: (34.610,98.068,115.581)
N9: (35.070,96.220,116.775)
O5': (35.592,98.334,120.640)
O3': (38.520,95.164,119.478)
C2: (35.083,98.453,108.697)
OP1: (40.363,95.106,104.353)
OP2: (38.264,93.651,104.206)
C4: (35.299,99.845,106.858)
O5': (38.469,95.457,105.911)
C3': (36.523,94.722,108.018)
C1': (36.779,96.731,109.194)
O4': (38.053,96.334,108.707)
C5': (38.934,94.741,107.082)
P: (38.888,94.972,104.451)
O2: (34.481,98.072,109.700)
C4': (38.001,94.956,108.261)
C2': (35.891,95.494,109.160)
O2': (36.027,94.831,110.394)
N1: (36.260,97.809,108.333)
N3: (34.630,99.471,107.945)
N4: (34.835,100.879,106.163)
C6: (36.924,98.183,107.198)
C5: (36.480,99.184,106.439)
O3': (36.179,93.355,108.049)
OP1: (40.363,95.106,104.353)
OP2: (38.264,93.651,104.206)
C4: (35.299,99.845,106.858)
O5': (38.469,95.457,105.911)
C3': (36.523,94.722,108.018)
C1': (36.779,96.731,109.194)
O4': (38.053,96.334,108.707)
C5': (38.934,94.741,107.082)
P: (38.888,94.972,104.451)
O2: (34.481,98.072,109.700)
C4': (38.001,94.956,108.261)
C2': (35.891,95.494,109.160)
O2': (36.027,94.831,110.394)
N1: (36.260,97.809,108.333)
N3: (34.630,99.471,107.945)
N4: (34.835,100.879,106.163)
C6: (36.924,98.183,107.198)
C5: (36.480,99.184,106.439)
O3': (36.179,93.355,108.049)
Image (generated by PyMOL):