ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A816:A694

Extra

PDB:
ATOM 1 O3' G A 815 54.266 50.583 3.089 1.00 83.33 O
ATOM 2 P G A 816 55.701 49.862 3.257 1.00 81.05 P
ATOM 3 OP1 G A 816 55.320 48.516 3.737 1.00 84.13 O
ATOM 4 OP2 G A 816 56.625 50.698 4.081 1.00 73.92 O
ATOM 5 O5' G A 816 56.301 49.699 1.779 1.00 74.30 O
ATOM 6 C5' G A 816 56.328 48.421 1.143 1.00 75.33 C
ATOM 7 C4' G A 816 57.382 48.349 0.052 1.00 75.15 C
ATOM 8 O4' G A 816 57.122 49.350 -0.973 1.00 72.81 O
ATOM 9 C3' G A 816 58.861 48.557 0.363 1.00 72.63 C
ATOM 10 O3' G A 816 59.547 47.455 0.973 1.00 68.74 O
ATOM 11 C2' G A 816 59.429 48.790 -1.035 1.00 71.91 C
ATOM 12 O2' G A 816 59.643 47.561 -1.701 1.00 66.02 O
ATOM 13 C1' G A 816 58.312 49.578 -1.721 1.00 71.77 C
ATOM 14 N9 G A 816 58.639 51.004 -1.728 1.00 73.23 N
ATOM 15 C8 G A 816 58.091 51.989 -0.946 1.00 78.97 C
ATOM 16 N7 G A 816 58.659 53.154 -1.111 1.00 78.40 N
ATOM 17 C5 G A 816 59.631 52.935 -2.073 1.00 77.81 C
ATOM 18 C6 G A 816 60.580 53.828 -2.637 1.00 80.24 C
ATOM 19 O6 G A 816 60.760 55.033 -2.376 1.00 82.62 O
ATOM 20 N1 G A 816 61.376 53.189 -3.586 1.00 78.97 N
ATOM 21 C2 G A 816 61.279 51.861 -3.941 1.00 77.43 C
ATOM 22 N2 G A 816 62.140 51.427 -4.878 1.00 74.91 N
ATOM 23 N3 G A 816 60.403 51.020 -3.414 1.00 77.97 N
ATOM 24 C4 G A 816 59.617 51.619 -2.491 1.00 75.77 C
ATOM 25 P G A 817 61.050 47.666 1.567 1.00 63.90 P
ATOM 26 OP1 G A 817 61.463 46.384 2.173 1.00 67.25 O
ATOM 27 OP2 G A 817 61.099 48.910 2.391 1.00 64.81 O
ATOM 28 O5' G A 817 61.982 47.915 0.290 1.00 66.02 O
TER

ATOM 1 O3' G B 693 63.925 48.582 -7.729 1.00 81.80 O
ATOM 2 P G B 694 62.983 47.653 -6.807 1.00 77.20 P
ATOM 3 OP1 G B 694 62.202 48.594 -5.968 1.00 73.84 O
ATOM 4 OP2 G B 694 63.759 46.565 -6.153 1.00 81.12 O
ATOM 5 O5' G B 694 61.984 46.969 -7.829 1.00 68.79 O
ATOM 6 C5' G B 694 61.008 47.741 -8.508 1.00 74.97 C
ATOM 7 C4' G B 694 60.056 46.832 -9.241 1.00 74.02 C
ATOM 8 O4' G B 694 60.818 46.073 -10.217 1.00 78.67 O
ATOM 9 C3' G B 694 59.401 45.775 -8.371 1.00 71.21 C
ATOM 10 O3' G B 694 58.215 46.232 -7.758 1.00 69.51 O
ATOM 11 C2' G B 694 59.125 44.642 -9.342 1.00 71.91 C
ATOM 12 O2' G B 694 57.908 44.849 -10.035 1.00 75.57 O
ATOM 13 C1' G B 694 60.342 44.734 -10.271 1.00 74.00 C
ATOM 14 N9 G B 694 61.447 43.857 -9.872 1.00 73.77 N
ATOM 15 C8 G B 694 62.689 44.262 -9.452 1.00 74.29 C
ATOM 16 N7 G B 694 63.469 43.270 -9.128 1.00 75.49 N
ATOM 17 C5 G B 694 62.702 42.135 -9.344 1.00 75.96 C
ATOM 18 C6 G B 694 63.017 40.766 -9.143 1.00 82.09 C
ATOM 19 O6 G B 694 64.068 40.273 -8.707 1.00 81.43 O
ATOM 20 N1 G B 694 61.954 39.937 -9.494 1.00 78.38 N
ATOM 21 C2 G B 694 60.740 40.371 -9.970 1.00 76.62 C
ATOM 22 N2 G B 694 59.844 39.413 -10.260 1.00 75.72 N
ATOM 23 N3 G B 694 60.430 41.648 -10.150 1.00 77.49 N
ATOM 24 C4 G B 694 61.453 42.472 -9.818 1.00 74.14 C
ATOM 25 P C B 695 57.761 45.564 -6.374 1.00 77.12 P
ATOM 26 OP1 C B 695 56.581 46.300 -5.846 1.00 71.44 O
ATOM 27 OP2 C B 695 58.988 45.453 -5.551 1.00 72.64 O
ATOM 28 O5' C B 695 57.339 44.084 -6.769 1.00 68.92 O
TER

Atoms:
OP1: (55.320,48.516,3.737)
OP2: (56.625,50.698,4.081)
C3': (58.861,48.557,0.363)
C1': (58.312,49.578,-1.721)
C5': (56.328,48.421,1.143)
O6: (60.760,55.033,-2.376)
O4': (57.122,49.350,-0.973)
C8: (58.091,51.989,-0.946)
C2: (61.279,51.861,-3.941)
C6: (60.580,53.828,-2.637)
C5: (59.631,52.935,-2.073)
C4: (59.617,51.619,-2.491)
P: (55.701,49.862,3.257)
C4': (57.382,48.349,0.052)
C2': (59.429,48.790,-1.035)
O2': (59.643,47.561,-1.701)
N1: (61.376,53.189,-3.586)
N2: (62.140,51.427,-4.878)
N3: (60.403,51.020,-3.414)
N7: (58.659,53.154,-1.111)
N9: (58.639,51.004,-1.728)
O5': (56.301,49.699,1.779)
O3': (59.547,47.455,0.973)
OP1: (62.202,48.594,-5.968)
OP2: (63.759,46.565,-6.153)
C3': (59.401,45.775,-8.371)
C1': (60.342,44.734,-10.271)
C5': (61.008,47.741,-8.508)
O6: (64.068,40.273,-8.707)
O4': (60.818,46.073,-10.217)
C8: (62.689,44.262,-9.452)
C2: (60.740,40.371,-9.970)
C6: (63.017,40.766,-9.143)
C5: (62.702,42.135,-9.344)
C4: (61.453,42.472,-9.818)
P: (62.983,47.653,-6.807)
C4': (60.056,46.832,-9.241)
C2': (59.125,44.642,-9.342)
O2': (57.908,44.849,-10.035)
N1: (61.954,39.937,-9.494)
N2: (59.844,39.413,-10.260)
N3: (60.430,41.648,-10.150)
N7: (63.469,43.270,-9.128)
N9: (61.447,43.857,-9.872)
O5': (61.984,46.969,-7.829)
O3': (58.215,46.232,-7.758)
Image (generated by PyMOL):
PyMOL image
show in jmol