Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NYI:A6:A7
Extra
PDB:
ATOM 1 O3' C A 5 24.950 16.175 24.920 1.00 36.46 O
ATOM 2 P U A 6 24.575 15.408 23.567 1.00 36.73 P
ATOM 3 OP1 U A 6 24.770 16.318 22.409 1.00 37.15 O
ATOM 4 OP2 U A 6 23.272 14.712 23.738 1.00 35.23 O
ATOM 5 O5' U A 6 25.763 14.347 23.485 1.00 37.88 O
ATOM 6 C5' U A 6 27.081 14.834 23.204 1.00 39.79 C
ATOM 7 C4' U A 6 28.133 13.735 23.225 1.00 41.17 C
ATOM 8 O4' U A 6 28.270 13.190 24.581 1.00 42.48 O
ATOM 9 C3' U A 6 27.878 12.519 22.340 1.00 40.78 C
ATOM 10 O3' U A 6 28.230 12.719 20.957 1.00 39.39 O
ATOM 11 C2' U A 6 28.829 11.558 23.037 1.00 42.17 C
ATOM 12 O2' U A 6 30.166 11.952 22.785 1.00 42.73 O
ATOM 13 C1' U A 6 28.480 11.795 24.507 1.00 42.43 C
ATOM 14 N1 U A 6 27.242 11.056 24.990 1.00 43.84 N
ATOM 15 C2 U A 6 27.340 9.807 25.601 1.00 43.56 C
ATOM 16 O2 U A 6 28.391 9.246 25.792 1.00 44.11 O
ATOM 17 N3 U A 6 26.157 9.218 25.985 1.00 42.37 N
ATOM 18 C4 U A 6 24.898 9.755 25.818 1.00 42.98 C
ATOM 19 O4 U A 6 23.908 9.152 26.191 1.00 44.19 O
ATOM 20 C5 U A 6 24.857 11.045 25.183 1.00 43.89 C
ATOM 21 C6 U A 6 25.996 11.629 24.797 1.00 43.91 C
ATOM 22 P G A 7 27.270 12.085 19.829 1.00 39.54 P
ATOM 23 OP1 G A 7 27.443 12.754 18.536 1.00 38.82 O
ATOM 24 OP2 G A 7 25.907 11.895 20.387 1.00 39.55 O
ATOM 25 O5' G A 7 27.883 10.619 19.619 1.00 41.63 O
TER
ATOM 1 O3' U B 6 28.230 12.719 20.957 1.00 39.39 O
ATOM 2 P G B 7 27.270 12.085 19.829 1.00 39.54 P
ATOM 3 OP1 G B 7 27.443 12.754 18.536 1.00 38.82 O
ATOM 4 OP2 G B 7 25.907 11.895 20.387 1.00 39.55 O
ATOM 5 O5' G B 7 27.883 10.619 19.619 1.00 41.63 O
ATOM 6 C5' G B 7 27.057 9.651 18.950 1.00 41.48 C
ATOM 7 C4' G B 7 27.576 8.254 19.160 1.00 40.67 C
ATOM 8 O4' G B 7 28.951 8.292 18.773 1.00 41.57 O
ATOM 9 C3' G B 7 27.644 7.805 20.595 1.00 41.23 C
ATOM 10 O3' G B 7 26.446 7.137 20.914 1.00 40.00 O
ATOM 11 C2' G B 7 28.824 6.837 20.593 1.00 42.72 C
ATOM 12 O2' G B 7 28.470 5.552 20.111 1.00 43.39 O
ATOM 13 C1' G B 7 29.742 7.426 19.552 1.00 42.45 C
ATOM 14 N9 G B 7 30.898 8.223 19.923 1.00 43.22 N
ATOM 15 C8 G B 7 30.944 9.585 19.845 1.00 43.93 C
ATOM 16 N7 G B 7 32.096 10.082 20.166 1.00 44.99 N
ATOM 17 C5 G B 7 32.870 8.981 20.456 1.00 45.10 C
ATOM 18 C6 G B 7 34.224 8.926 20.860 1.00 46.47 C
ATOM 19 O6 G B 7 35.008 9.859 21.053 1.00 47.12 O
ATOM 20 N1 G B 7 34.658 7.627 21.079 1.00 47.08 N
ATOM 21 C2 G B 7 33.865 6.521 20.897 1.00 47.85 C
ATOM 22 N2 G B 7 34.489 5.359 21.128 1.00 50.91 N
ATOM 23 N3 G B 7 32.581 6.549 20.511 1.00 47.01 N
ATOM 24 C4 G B 7 32.150 7.819 20.304 1.00 44.93 C
ATOM 25 P A B 8 25.947 7.239 22.425 1.00 40.23 P
ATOM 26 OP1 A B 8 24.756 6.357 22.520 1.00 39.64 O
ATOM 27 OP2 A B 8 25.939 8.662 22.812 1.00 41.23 O
ATOM 28 O5' A B 8 27.155 6.652 23.276 1.00 39.12 O
TER
ATOM 2 P U A 6 24.575 15.408 23.567 1.00 36.73 P
ATOM 3 OP1 U A 6 24.770 16.318 22.409 1.00 37.15 O
ATOM 4 OP2 U A 6 23.272 14.712 23.738 1.00 35.23 O
ATOM 5 O5' U A 6 25.763 14.347 23.485 1.00 37.88 O
ATOM 6 C5' U A 6 27.081 14.834 23.204 1.00 39.79 C
ATOM 7 C4' U A 6 28.133 13.735 23.225 1.00 41.17 C
ATOM 8 O4' U A 6 28.270 13.190 24.581 1.00 42.48 O
ATOM 9 C3' U A 6 27.878 12.519 22.340 1.00 40.78 C
ATOM 10 O3' U A 6 28.230 12.719 20.957 1.00 39.39 O
ATOM 11 C2' U A 6 28.829 11.558 23.037 1.00 42.17 C
ATOM 12 O2' U A 6 30.166 11.952 22.785 1.00 42.73 O
ATOM 13 C1' U A 6 28.480 11.795 24.507 1.00 42.43 C
ATOM 14 N1 U A 6 27.242 11.056 24.990 1.00 43.84 N
ATOM 15 C2 U A 6 27.340 9.807 25.601 1.00 43.56 C
ATOM 16 O2 U A 6 28.391 9.246 25.792 1.00 44.11 O
ATOM 17 N3 U A 6 26.157 9.218 25.985 1.00 42.37 N
ATOM 18 C4 U A 6 24.898 9.755 25.818 1.00 42.98 C
ATOM 19 O4 U A 6 23.908 9.152 26.191 1.00 44.19 O
ATOM 20 C5 U A 6 24.857 11.045 25.183 1.00 43.89 C
ATOM 21 C6 U A 6 25.996 11.629 24.797 1.00 43.91 C
ATOM 22 P G A 7 27.270 12.085 19.829 1.00 39.54 P
ATOM 23 OP1 G A 7 27.443 12.754 18.536 1.00 38.82 O
ATOM 24 OP2 G A 7 25.907 11.895 20.387 1.00 39.55 O
ATOM 25 O5' G A 7 27.883 10.619 19.619 1.00 41.63 O
TER
ATOM 1 O3' U B 6 28.230 12.719 20.957 1.00 39.39 O
ATOM 2 P G B 7 27.270 12.085 19.829 1.00 39.54 P
ATOM 3 OP1 G B 7 27.443 12.754 18.536 1.00 38.82 O
ATOM 4 OP2 G B 7 25.907 11.895 20.387 1.00 39.55 O
ATOM 5 O5' G B 7 27.883 10.619 19.619 1.00 41.63 O
ATOM 6 C5' G B 7 27.057 9.651 18.950 1.00 41.48 C
ATOM 7 C4' G B 7 27.576 8.254 19.160 1.00 40.67 C
ATOM 8 O4' G B 7 28.951 8.292 18.773 1.00 41.57 O
ATOM 9 C3' G B 7 27.644 7.805 20.595 1.00 41.23 C
ATOM 10 O3' G B 7 26.446 7.137 20.914 1.00 40.00 O
ATOM 11 C2' G B 7 28.824 6.837 20.593 1.00 42.72 C
ATOM 12 O2' G B 7 28.470 5.552 20.111 1.00 43.39 O
ATOM 13 C1' G B 7 29.742 7.426 19.552 1.00 42.45 C
ATOM 14 N9 G B 7 30.898 8.223 19.923 1.00 43.22 N
ATOM 15 C8 G B 7 30.944 9.585 19.845 1.00 43.93 C
ATOM 16 N7 G B 7 32.096 10.082 20.166 1.00 44.99 N
ATOM 17 C5 G B 7 32.870 8.981 20.456 1.00 45.10 C
ATOM 18 C6 G B 7 34.224 8.926 20.860 1.00 46.47 C
ATOM 19 O6 G B 7 35.008 9.859 21.053 1.00 47.12 O
ATOM 20 N1 G B 7 34.658 7.627 21.079 1.00 47.08 N
ATOM 21 C2 G B 7 33.865 6.521 20.897 1.00 47.85 C
ATOM 22 N2 G B 7 34.489 5.359 21.128 1.00 50.91 N
ATOM 23 N3 G B 7 32.581 6.549 20.511 1.00 47.01 N
ATOM 24 C4 G B 7 32.150 7.819 20.304 1.00 44.93 C
ATOM 25 P A B 8 25.947 7.239 22.425 1.00 40.23 P
ATOM 26 OP1 A B 8 24.756 6.357 22.520 1.00 39.64 O
ATOM 27 OP2 A B 8 25.939 8.662 22.812 1.00 41.23 O
ATOM 28 O5' A B 8 27.155 6.652 23.276 1.00 39.12 O
TER
Atoms:
C4: (24.898,9.755,25.818)
N3: (26.157,9.218,25.985)
OP1: (24.770,16.318,22.409)
OP2: (23.272,14.712,23.738)
C2: (27.340,9.807,25.601)
C1': (28.480,11.795,24.507)
C3': (27.878,12.519,22.340)
O5': (25.763,14.347,23.485)
O4': (28.270,13.190,24.581)
C5': (27.081,14.834,23.204)
P: (24.575,15.408,23.567)
C4': (28.133,13.735,23.225)
C2': (28.829,11.558,23.037)
O2': (30.166,11.952,22.785)
N1: (27.242,11.056,24.990)
O4: (23.908,9.152,26.191)
O2: (28.391,9.246,25.792)
C6: (25.996,11.629,24.797)
C5: (24.857,11.045,25.183)
O3': (28.230,12.719,20.957)
N3: (26.157,9.218,25.985)
OP1: (24.770,16.318,22.409)
OP2: (23.272,14.712,23.738)
C2: (27.340,9.807,25.601)
C1': (28.480,11.795,24.507)
C3': (27.878,12.519,22.340)
O5': (25.763,14.347,23.485)
O4': (28.270,13.190,24.581)
C5': (27.081,14.834,23.204)
P: (24.575,15.408,23.567)
C4': (28.133,13.735,23.225)
C2': (28.829,11.558,23.037)
O2': (30.166,11.952,22.785)
N1: (27.242,11.056,24.990)
O4: (23.908,9.152,26.191)
O2: (28.391,9.246,25.792)
C6: (25.996,11.629,24.797)
C5: (24.857,11.045,25.183)
O3': (28.230,12.719,20.957)
OP1: (27.443,12.754,18.536)
OP2: (25.907,11.895,20.387)
C3': (27.644,7.805,20.595)
C1': (29.742,7.426,19.552)
C5': (27.057,9.651,18.950)
O6: (35.008,9.859,21.053)
O4': (28.951,8.292,18.773)
C8: (30.944,9.585,19.845)
C2: (33.865,6.521,20.897)
C6: (34.224,8.926,20.860)
C5: (32.870,8.981,20.456)
C4: (32.150,7.819,20.304)
P: (27.270,12.085,19.829)
C4': (27.576,8.254,19.160)
C2': (28.824,6.837,20.593)
O2': (28.470,5.552,20.111)
N1: (34.658,7.627,21.079)
N2: (34.489,5.359,21.128)
N3: (32.581,6.549,20.511)
N7: (32.096,10.082,20.166)
N9: (30.898,8.223,19.923)
O5': (27.883,10.619,19.619)
O3': (26.446,7.137,20.914)
OP2: (25.907,11.895,20.387)
C3': (27.644,7.805,20.595)
C1': (29.742,7.426,19.552)
C5': (27.057,9.651,18.950)
O6: (35.008,9.859,21.053)
O4': (28.951,8.292,18.773)
C8: (30.944,9.585,19.845)
C2: (33.865,6.521,20.897)
C6: (34.224,8.926,20.860)
C5: (32.870,8.981,20.456)
C4: (32.150,7.819,20.304)
P: (27.270,12.085,19.829)
C4': (27.576,8.254,19.160)
C2': (28.824,6.837,20.593)
O2': (28.470,5.552,20.111)
N1: (34.658,7.627,21.079)
N2: (34.489,5.359,21.128)
N3: (32.581,6.549,20.511)
N7: (32.096,10.082,20.166)
N9: (30.898,8.223,19.923)
O5': (27.883,10.619,19.619)
O3': (26.446,7.137,20.914)
Image (generated by PyMOL):