Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NPQ:C38:C33
Extra
PDB:
ATOM 1 P A A 38 0.134 -11.700 32.261 1.00 62.12 P
ATOM 2 OP1 A A 38 -0.465 -12.687 31.329 1.00 60.13 O
ATOM 3 OP2 A A 38 0.261 -10.255 31.953 1.00 68.36 O
ATOM 4 O5' A A 38 -0.343 -11.946 33.773 1.00 57.31 O
ATOM 5 C5' A A 38 -0.405 -10.888 34.718 1.00 55.93 C
ATOM 6 C4' A A 38 -1.093 -11.367 35.985 1.00 51.81 C
ATOM 7 O4' A A 38 -0.265 -12.363 36.638 1.00 61.16 O
ATOM 8 C3' A A 38 -1.329 -10.285 37.029 1.00 41.74 C
ATOM 9 O3' A A 38 -2.613 -9.709 36.850 1.00 42.85 O
ATOM 10 C2' A A 38 -1.244 -11.068 38.334 1.00 39.22 C
ATOM 11 O2' A A 38 -2.436 -11.768 38.628 1.00 38.16 O
ATOM 12 C1' A A 38 -0.123 -12.045 38.008 1.00 53.24 C
ATOM 13 N9 A A 38 1.202 -11.468 38.207 1.00 46.15 N
ATOM 14 C8 A A 38 2.029 -10.954 37.248 1.00 44.12 C
ATOM 15 N7 A A 38 3.165 -10.499 37.719 1.00 43.26 N
ATOM 16 C5 A A 38 3.076 -10.730 39.081 1.00 43.58 C
ATOM 17 C6 A A 38 3.960 -10.474 40.145 1.00 40.18 C
ATOM 18 N6 A A 38 5.158 -9.904 39.987 1.00 36.77 N
ATOM 19 N1 A A 38 3.562 -10.828 41.384 1.00 40.21 N
ATOM 20 C2 A A 38 2.363 -11.399 41.541 1.00 36.81 C
ATOM 21 N3 A A 38 1.448 -11.690 40.619 1.00 34.12 N
ATOM 22 C4 A A 38 1.871 -11.326 39.399 1.00 37.39 C
ATOM 23 P A A 39 -2.783 -8.121 36.932 1.00 48.59 P
ATOM 24 OP1 A A 39 -4.104 -7.775 36.362 1.00 53.82 O
ATOM 25 OP2 A A 39 -1.556 -7.507 36.379 1.00 52.79 O
ATOM 26 O5' A A 39 -2.810 -7.840 38.507 1.00 45.91 O
TER
ATOM 1 O3' U B 32 5.719 -4.172 47.193 1.00 27.78 O
ATOM 2 P C B 33 6.362 -5.374 48.030 1.00 38.35 P
ATOM 3 OP1 C B 33 5.639 -5.468 49.318 1.00 35.74 O
ATOM 4 OP2 C B 33 7.833 -5.207 48.018 1.00 34.70 O
ATOM 5 O5' C B 33 6.005 -6.651 47.138 1.00 30.00 O
ATOM 6 C5' C B 33 4.646 -6.955 46.863 1.00 30.71 C
ATOM 7 C4' C B 33 4.534 -7.849 45.643 1.00 32.24 C
ATOM 8 O4' C B 33 5.090 -7.170 44.489 1.00 36.08 O
ATOM 9 C3' C B 33 5.318 -9.148 45.716 1.00 33.01 C
ATOM 10 O3' C B 33 4.585 -10.135 46.433 1.00 40.42 O
ATOM 11 C2' C B 33 5.412 -9.492 44.236 1.00 37.62 C
ATOM 12 O2' C B 33 4.201 -10.025 43.743 1.00 40.83 O
ATOM 13 C1' C B 33 5.674 -8.122 43.620 1.00 41.36 C
ATOM 14 N1 C B 33 7.126 -7.819 43.460 1.00 39.59 N
ATOM 15 C2 C B 33 7.832 -8.386 42.394 1.00 43.86 C
ATOM 16 O2 C B 33 7.235 -9.127 41.604 1.00 49.47 O
ATOM 17 N3 C B 33 9.151 -8.107 42.256 1.00 47.74 N
ATOM 18 C4 C B 33 9.758 -7.303 43.129 1.00 44.58 C
ATOM 19 N4 C B 33 11.060 -7.057 42.952 1.00 47.10 N
ATOM 20 C5 C B 33 9.056 -6.715 44.223 1.00 39.21 C
ATOM 21 C6 C B 33 7.755 -6.998 44.349 1.00 39.96 C
ATOM 22 P G B 34 5.356 -11.256 47.277 1.00 26.58 P
ATOM 23 OP1 G B 34 4.523 -11.595 48.452 1.00 37.40 O
ATOM 24 OP2 G B 34 6.750 -10.799 47.466 1.00 27.50 O
ATOM 25 O5' G B 34 5.387 -12.508 46.281 1.00 34.49 O
TER
ATOM 2 OP1 A A 38 -0.465 -12.687 31.329 1.00 60.13 O
ATOM 3 OP2 A A 38 0.261 -10.255 31.953 1.00 68.36 O
ATOM 4 O5' A A 38 -0.343 -11.946 33.773 1.00 57.31 O
ATOM 5 C5' A A 38 -0.405 -10.888 34.718 1.00 55.93 C
ATOM 6 C4' A A 38 -1.093 -11.367 35.985 1.00 51.81 C
ATOM 7 O4' A A 38 -0.265 -12.363 36.638 1.00 61.16 O
ATOM 8 C3' A A 38 -1.329 -10.285 37.029 1.00 41.74 C
ATOM 9 O3' A A 38 -2.613 -9.709 36.850 1.00 42.85 O
ATOM 10 C2' A A 38 -1.244 -11.068 38.334 1.00 39.22 C
ATOM 11 O2' A A 38 -2.436 -11.768 38.628 1.00 38.16 O
ATOM 12 C1' A A 38 -0.123 -12.045 38.008 1.00 53.24 C
ATOM 13 N9 A A 38 1.202 -11.468 38.207 1.00 46.15 N
ATOM 14 C8 A A 38 2.029 -10.954 37.248 1.00 44.12 C
ATOM 15 N7 A A 38 3.165 -10.499 37.719 1.00 43.26 N
ATOM 16 C5 A A 38 3.076 -10.730 39.081 1.00 43.58 C
ATOM 17 C6 A A 38 3.960 -10.474 40.145 1.00 40.18 C
ATOM 18 N6 A A 38 5.158 -9.904 39.987 1.00 36.77 N
ATOM 19 N1 A A 38 3.562 -10.828 41.384 1.00 40.21 N
ATOM 20 C2 A A 38 2.363 -11.399 41.541 1.00 36.81 C
ATOM 21 N3 A A 38 1.448 -11.690 40.619 1.00 34.12 N
ATOM 22 C4 A A 38 1.871 -11.326 39.399 1.00 37.39 C
ATOM 23 P A A 39 -2.783 -8.121 36.932 1.00 48.59 P
ATOM 24 OP1 A A 39 -4.104 -7.775 36.362 1.00 53.82 O
ATOM 25 OP2 A A 39 -1.556 -7.507 36.379 1.00 52.79 O
ATOM 26 O5' A A 39 -2.810 -7.840 38.507 1.00 45.91 O
TER
ATOM 1 O3' U B 32 5.719 -4.172 47.193 1.00 27.78 O
ATOM 2 P C B 33 6.362 -5.374 48.030 1.00 38.35 P
ATOM 3 OP1 C B 33 5.639 -5.468 49.318 1.00 35.74 O
ATOM 4 OP2 C B 33 7.833 -5.207 48.018 1.00 34.70 O
ATOM 5 O5' C B 33 6.005 -6.651 47.138 1.00 30.00 O
ATOM 6 C5' C B 33 4.646 -6.955 46.863 1.00 30.71 C
ATOM 7 C4' C B 33 4.534 -7.849 45.643 1.00 32.24 C
ATOM 8 O4' C B 33 5.090 -7.170 44.489 1.00 36.08 O
ATOM 9 C3' C B 33 5.318 -9.148 45.716 1.00 33.01 C
ATOM 10 O3' C B 33 4.585 -10.135 46.433 1.00 40.42 O
ATOM 11 C2' C B 33 5.412 -9.492 44.236 1.00 37.62 C
ATOM 12 O2' C B 33 4.201 -10.025 43.743 1.00 40.83 O
ATOM 13 C1' C B 33 5.674 -8.122 43.620 1.00 41.36 C
ATOM 14 N1 C B 33 7.126 -7.819 43.460 1.00 39.59 N
ATOM 15 C2 C B 33 7.832 -8.386 42.394 1.00 43.86 C
ATOM 16 O2 C B 33 7.235 -9.127 41.604 1.00 49.47 O
ATOM 17 N3 C B 33 9.151 -8.107 42.256 1.00 47.74 N
ATOM 18 C4 C B 33 9.758 -7.303 43.129 1.00 44.58 C
ATOM 19 N4 C B 33 11.060 -7.057 42.952 1.00 47.10 N
ATOM 20 C5 C B 33 9.056 -6.715 44.223 1.00 39.21 C
ATOM 21 C6 C B 33 7.755 -6.998 44.349 1.00 39.96 C
ATOM 22 P G B 34 5.356 -11.256 47.277 1.00 26.58 P
ATOM 23 OP1 G B 34 4.523 -11.595 48.452 1.00 37.40 O
ATOM 24 OP2 G B 34 6.750 -10.799 47.466 1.00 27.50 O
ATOM 25 O5' G B 34 5.387 -12.508 46.281 1.00 34.49 O
TER
Atoms:
OP1: (-0.465,-12.687,31.329)
OP2: (0.261,-10.255,31.953)
C3': (-1.329,-10.285,37.029)
C1': (-0.123,-12.045,38.008)
C5': (-0.405,-10.888,34.718)
O4': (-0.265,-12.363,36.638)
C8: (2.029,-10.954,37.248)
O2': (-2.436,-11.768,38.628)
C6: (3.960,-10.474,40.145)
C5: (3.076,-10.730,39.081)
C4: (1.871,-11.326,39.399)
P: (0.134,-11.700,32.261)
C4': (-1.093,-11.367,35.985)
C2': (-1.244,-11.068,38.334)
C2: (2.363,-11.399,41.541)
N1: (3.562,-10.828,41.384)
N3: (1.448,-11.690,40.619)
N6: (5.158,-9.904,39.987)
N7: (3.165,-10.499,37.719)
N9: (1.202,-11.468,38.207)
O5': (-0.343,-11.946,33.773)
O3': (-2.613,-9.709,36.850)
OP2: (0.261,-10.255,31.953)
C3': (-1.329,-10.285,37.029)
C1': (-0.123,-12.045,38.008)
C5': (-0.405,-10.888,34.718)
O4': (-0.265,-12.363,36.638)
C8: (2.029,-10.954,37.248)
O2': (-2.436,-11.768,38.628)
C6: (3.960,-10.474,40.145)
C5: (3.076,-10.730,39.081)
C4: (1.871,-11.326,39.399)
P: (0.134,-11.700,32.261)
C4': (-1.093,-11.367,35.985)
C2': (-1.244,-11.068,38.334)
C2: (2.363,-11.399,41.541)
N1: (3.562,-10.828,41.384)
N3: (1.448,-11.690,40.619)
N6: (5.158,-9.904,39.987)
N7: (3.165,-10.499,37.719)
N9: (1.202,-11.468,38.207)
O5': (-0.343,-11.946,33.773)
O3': (-2.613,-9.709,36.850)
C2: (7.832,-8.386,42.394)
OP1: (5.639,-5.468,49.318)
OP2: (7.833,-5.207,48.018)
C4: (9.758,-7.303,43.129)
O5': (6.005,-6.651,47.138)
C3': (5.318,-9.148,45.716)
C1': (5.674,-8.122,43.620)
O4': (5.090,-7.170,44.489)
C5': (4.646,-6.955,46.863)
P: (6.362,-5.374,48.030)
O2: (7.235,-9.127,41.604)
C4': (4.534,-7.849,45.643)
C2': (5.412,-9.492,44.236)
O2': (4.201,-10.025,43.743)
N1: (7.126,-7.819,43.460)
N3: (9.151,-8.107,42.256)
N4: (11.060,-7.057,42.952)
C6: (7.755,-6.998,44.349)
C5: (9.056,-6.715,44.223)
O3': (4.585,-10.135,46.433)
OP1: (5.639,-5.468,49.318)
OP2: (7.833,-5.207,48.018)
C4: (9.758,-7.303,43.129)
O5': (6.005,-6.651,47.138)
C3': (5.318,-9.148,45.716)
C1': (5.674,-8.122,43.620)
O4': (5.090,-7.170,44.489)
C5': (4.646,-6.955,46.863)
P: (6.362,-5.374,48.030)
O2: (7.235,-9.127,41.604)
C4': (4.534,-7.849,45.643)
C2': (5.412,-9.492,44.236)
O2': (4.201,-10.025,43.743)
N1: (7.126,-7.819,43.460)
N3: (9.151,-8.107,42.256)
N4: (11.060,-7.057,42.952)
C6: (7.755,-6.998,44.349)
C5: (9.056,-6.715,44.223)
O3': (4.585,-10.135,46.433)
Image (generated by PyMOL):