Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U9S:A9:A10
Extra
PDB:
ATOM 1 O3' G A 8 2.140 21.748 101.453 1.00111.46 O
ATOM 2 P U A 9 0.887 22.234 102.337 1.00112.97 P
ATOM 3 OP1 U A 9 -0.055 22.988 101.472 1.00114.13 O
ATOM 4 OP2 U A 9 1.439 22.884 103.556 1.00113.83 O
ATOM 5 O5' U A 9 0.189 20.869 102.778 1.00109.29 O
ATOM 6 C5' U A 9 -0.285 19.940 101.804 1.00104.31 C
ATOM 7 C4' U A 9 -0.710 18.662 102.477 1.00103.47 C
ATOM 8 O4' U A 9 0.460 17.909 102.875 1.00103.14 O
ATOM 9 C3' U A 9 -1.477 18.878 103.770 1.00106.63 C
ATOM 10 O3' U A 9 -2.860 19.074 103.486 1.00115.10 O
ATOM 11 C2' U A 9 -1.236 17.569 104.509 1.00105.64 C
ATOM 12 O2' U A 9 -2.082 16.539 104.056 1.00105.31 O
ATOM 13 C1' U A 9 0.200 17.244 104.101 1.00105.91 C
ATOM 14 N1 U A 9 1.225 17.621 105.089 1.00107.96 N
ATOM 15 C2 U A 9 1.489 16.720 106.107 1.00107.92 C
ATOM 16 O2 U A 9 0.892 15.658 106.218 1.00106.01 O
ATOM 17 N3 U A 9 2.476 17.106 106.987 1.00106.77 N
ATOM 18 C4 U A 9 3.209 18.277 106.958 1.00105.47 C
ATOM 19 O4 U A 9 4.065 18.478 107.820 1.00105.05 O
ATOM 20 C5 U A 9 2.873 19.162 105.886 1.00105.67 C
ATOM 21 C6 U A 9 1.914 18.815 105.011 1.00108.80 C
ATOM 22 P A A 10 -3.657 20.299 104.167 1.00120.41 P
ATOM 23 OP1 A A 10 -5.045 20.285 103.634 1.00118.93 O
ATOM 24 OP2 A A 10 -2.824 21.529 104.031 1.00120.53 O
ATOM 25 O5' A A 10 -3.723 19.906 105.708 1.00119.32 O
TER
ATOM 1 O3' U B 9 -2.860 19.074 103.486 1.00115.10 O
ATOM 2 P A B 10 -3.657 20.299 104.167 1.00120.41 P
ATOM 3 OP1 A B 10 -5.045 20.285 103.634 1.00118.93 O
ATOM 4 OP2 A B 10 -2.824 21.529 104.031 1.00120.53 O
ATOM 5 O5' A B 10 -3.723 19.906 105.708 1.00119.32 O
ATOM 6 C5' A B 10 -3.981 20.882 106.720 1.00118.22 C
ATOM 7 C4' A B 10 -4.592 20.201 107.920 1.00115.78 C
ATOM 8 O4' A B 10 -5.947 19.808 107.595 1.00112.84 O
ATOM 9 C3' A B 10 -3.904 18.928 108.389 1.00113.65 C
ATOM 10 O3' A B 10 -2.808 19.212 109.258 1.00109.52 O
ATOM 11 C2' A B 10 -5.048 18.199 109.081 1.00112.64 C
ATOM 12 O2' A B 10 -5.314 18.711 110.374 1.00111.43 O
ATOM 13 C1' A B 10 -6.212 18.528 108.139 1.00111.22 C
ATOM 14 N9 A B 10 -6.271 17.615 106.996 1.00107.79 N
ATOM 15 C8 A B 10 -6.216 17.989 105.673 1.00105.63 C
ATOM 16 N7 A B 10 -6.265 16.986 104.834 1.00102.84 N
ATOM 17 C5 A B 10 -6.364 15.873 105.654 1.00102.71 C
ATOM 18 C6 A B 10 -6.450 14.505 105.367 1.00 99.58 C
ATOM 19 N6 A B 10 -6.445 14.015 104.126 1.00 94.84 N
ATOM 20 N1 A B 10 -6.540 13.647 106.408 1.00101.71 N
ATOM 21 C2 A B 10 -6.538 14.150 107.658 1.00105.48 C
ATOM 22 N3 A B 10 -6.459 15.423 108.056 1.00106.05 N
ATOM 23 C4 A B 10 -6.374 16.245 106.992 1.00106.44 C
ATOM 24 P A B 11 -1.414 18.425 109.068 1.00105.20 P
ATOM 25 OP1 A B 11 -0.354 19.209 109.751 1.00104.81 O
ATOM 26 OP2 A B 11 -1.254 18.065 107.635 1.00105.37 O
ATOM 27 O5' A B 11 -1.626 17.064 109.854 1.00 96.71 O
TER
ATOM 2 P U A 9 0.887 22.234 102.337 1.00112.97 P
ATOM 3 OP1 U A 9 -0.055 22.988 101.472 1.00114.13 O
ATOM 4 OP2 U A 9 1.439 22.884 103.556 1.00113.83 O
ATOM 5 O5' U A 9 0.189 20.869 102.778 1.00109.29 O
ATOM 6 C5' U A 9 -0.285 19.940 101.804 1.00104.31 C
ATOM 7 C4' U A 9 -0.710 18.662 102.477 1.00103.47 C
ATOM 8 O4' U A 9 0.460 17.909 102.875 1.00103.14 O
ATOM 9 C3' U A 9 -1.477 18.878 103.770 1.00106.63 C
ATOM 10 O3' U A 9 -2.860 19.074 103.486 1.00115.10 O
ATOM 11 C2' U A 9 -1.236 17.569 104.509 1.00105.64 C
ATOM 12 O2' U A 9 -2.082 16.539 104.056 1.00105.31 O
ATOM 13 C1' U A 9 0.200 17.244 104.101 1.00105.91 C
ATOM 14 N1 U A 9 1.225 17.621 105.089 1.00107.96 N
ATOM 15 C2 U A 9 1.489 16.720 106.107 1.00107.92 C
ATOM 16 O2 U A 9 0.892 15.658 106.218 1.00106.01 O
ATOM 17 N3 U A 9 2.476 17.106 106.987 1.00106.77 N
ATOM 18 C4 U A 9 3.209 18.277 106.958 1.00105.47 C
ATOM 19 O4 U A 9 4.065 18.478 107.820 1.00105.05 O
ATOM 20 C5 U A 9 2.873 19.162 105.886 1.00105.67 C
ATOM 21 C6 U A 9 1.914 18.815 105.011 1.00108.80 C
ATOM 22 P A A 10 -3.657 20.299 104.167 1.00120.41 P
ATOM 23 OP1 A A 10 -5.045 20.285 103.634 1.00118.93 O
ATOM 24 OP2 A A 10 -2.824 21.529 104.031 1.00120.53 O
ATOM 25 O5' A A 10 -3.723 19.906 105.708 1.00119.32 O
TER
ATOM 1 O3' U B 9 -2.860 19.074 103.486 1.00115.10 O
ATOM 2 P A B 10 -3.657 20.299 104.167 1.00120.41 P
ATOM 3 OP1 A B 10 -5.045 20.285 103.634 1.00118.93 O
ATOM 4 OP2 A B 10 -2.824 21.529 104.031 1.00120.53 O
ATOM 5 O5' A B 10 -3.723 19.906 105.708 1.00119.32 O
ATOM 6 C5' A B 10 -3.981 20.882 106.720 1.00118.22 C
ATOM 7 C4' A B 10 -4.592 20.201 107.920 1.00115.78 C
ATOM 8 O4' A B 10 -5.947 19.808 107.595 1.00112.84 O
ATOM 9 C3' A B 10 -3.904 18.928 108.389 1.00113.65 C
ATOM 10 O3' A B 10 -2.808 19.212 109.258 1.00109.52 O
ATOM 11 C2' A B 10 -5.048 18.199 109.081 1.00112.64 C
ATOM 12 O2' A B 10 -5.314 18.711 110.374 1.00111.43 O
ATOM 13 C1' A B 10 -6.212 18.528 108.139 1.00111.22 C
ATOM 14 N9 A B 10 -6.271 17.615 106.996 1.00107.79 N
ATOM 15 C8 A B 10 -6.216 17.989 105.673 1.00105.63 C
ATOM 16 N7 A B 10 -6.265 16.986 104.834 1.00102.84 N
ATOM 17 C5 A B 10 -6.364 15.873 105.654 1.00102.71 C
ATOM 18 C6 A B 10 -6.450 14.505 105.367 1.00 99.58 C
ATOM 19 N6 A B 10 -6.445 14.015 104.126 1.00 94.84 N
ATOM 20 N1 A B 10 -6.540 13.647 106.408 1.00101.71 N
ATOM 21 C2 A B 10 -6.538 14.150 107.658 1.00105.48 C
ATOM 22 N3 A B 10 -6.459 15.423 108.056 1.00106.05 N
ATOM 23 C4 A B 10 -6.374 16.245 106.992 1.00106.44 C
ATOM 24 P A B 11 -1.414 18.425 109.068 1.00105.20 P
ATOM 25 OP1 A B 11 -0.354 19.209 109.751 1.00104.81 O
ATOM 26 OP2 A B 11 -1.254 18.065 107.635 1.00105.37 O
ATOM 27 O5' A B 11 -1.626 17.064 109.854 1.00 96.71 O
TER
Atoms:
C4: (3.209,18.277,106.958)
N3: (2.476,17.106,106.987)
OP1: (-0.055,22.988,101.472)
OP2: (1.439,22.884,103.556)
C2: (1.489,16.720,106.107)
C1': (0.200,17.244,104.101)
C3': (-1.477,18.878,103.770)
O5': (0.189,20.869,102.778)
O4': (0.460,17.909,102.875)
C5': (-0.285,19.940,101.804)
P: (0.887,22.234,102.337)
C4': (-0.710,18.662,102.477)
C2': (-1.236,17.569,104.509)
O2': (-2.082,16.539,104.056)
N1: (1.225,17.621,105.089)
O4: (4.065,18.478,107.820)
O2: (0.892,15.658,106.218)
C6: (1.914,18.815,105.011)
C5: (2.873,19.162,105.886)
O3': (-2.860,19.074,103.486)
N3: (2.476,17.106,106.987)
OP1: (-0.055,22.988,101.472)
OP2: (1.439,22.884,103.556)
C2: (1.489,16.720,106.107)
C1': (0.200,17.244,104.101)
C3': (-1.477,18.878,103.770)
O5': (0.189,20.869,102.778)
O4': (0.460,17.909,102.875)
C5': (-0.285,19.940,101.804)
P: (0.887,22.234,102.337)
C4': (-0.710,18.662,102.477)
C2': (-1.236,17.569,104.509)
O2': (-2.082,16.539,104.056)
N1: (1.225,17.621,105.089)
O4: (4.065,18.478,107.820)
O2: (0.892,15.658,106.218)
C6: (1.914,18.815,105.011)
C5: (2.873,19.162,105.886)
O3': (-2.860,19.074,103.486)
OP1: (-5.045,20.285,103.634)
OP2: (-2.824,21.529,104.031)
C3': (-3.904,18.928,108.389)
C1': (-6.212,18.528,108.139)
C5': (-3.981,20.882,106.720)
O4': (-5.947,19.808,107.595)
C8: (-6.216,17.989,105.673)
O2': (-5.314,18.711,110.374)
C6: (-6.450,14.505,105.367)
C5: (-6.364,15.873,105.654)
C4: (-6.374,16.245,106.992)
P: (-3.657,20.299,104.167)
C4': (-4.592,20.201,107.920)
C2': (-5.048,18.199,109.081)
C2: (-6.538,14.150,107.658)
N1: (-6.540,13.647,106.408)
N3: (-6.459,15.423,108.056)
N6: (-6.445,14.015,104.126)
N7: (-6.265,16.986,104.834)
N9: (-6.271,17.615,106.996)
O5': (-3.723,19.906,105.708)
O3': (-2.808,19.212,109.258)
OP2: (-2.824,21.529,104.031)
C3': (-3.904,18.928,108.389)
C1': (-6.212,18.528,108.139)
C5': (-3.981,20.882,106.720)
O4': (-5.947,19.808,107.595)
C8: (-6.216,17.989,105.673)
O2': (-5.314,18.711,110.374)
C6: (-6.450,14.505,105.367)
C5: (-6.364,15.873,105.654)
C4: (-6.374,16.245,106.992)
P: (-3.657,20.299,104.167)
C4': (-4.592,20.201,107.920)
C2': (-5.048,18.199,109.081)
C2: (-6.538,14.150,107.658)
N1: (-6.540,13.647,106.408)
N3: (-6.459,15.423,108.056)
N6: (-6.445,14.015,104.126)
N7: (-6.265,16.986,104.834)
N9: (-6.271,17.615,106.996)
O5': (-3.723,19.906,105.708)
O3': (-2.808,19.212,109.258)
Image (generated by PyMOL):