ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01198:02026

Extra

PDB:
ATOM 1 O3' C A1197 36.461 107.971 121.979 1.00 45.98 O
ATOM 2 P G A1198 37.067 108.783 120.724 1.00 45.82 P
ATOM 3 OP1 G A1198 36.955 107.907 119.529 1.00 46.92 O
ATOM 4 OP2 G A1198 38.402 109.297 121.135 1.00 45.87 O
ATOM 5 O5' G A1198 36.093 110.026 120.514 1.00 44.42 O
ATOM 6 C5' G A1198 34.994 109.956 119.592 1.00 42.34 C
ATOM 7 C4' G A1198 34.607 111.336 119.132 1.00 41.63 C
ATOM 8 O4' G A1198 33.603 111.223 118.092 1.00 43.81 O
ATOM 9 C3' G A1198 33.959 112.213 120.184 1.00 41.69 C
ATOM 10 O3' G A1198 34.919 112.866 120.991 1.00 41.76 O
ATOM 11 C2' G A1198 33.135 113.167 119.338 1.00 42.63 C
ATOM 12 O2' G A1198 33.917 114.150 118.693 1.00 43.78 O
ATOM 13 C1' G A1198 32.599 112.208 118.277 1.00 42.57 C
ATOM 14 N9 G A1198 31.379 111.522 118.699 1.00 40.90 N
ATOM 15 C8 G A1198 31.187 110.163 118.790 1.00 40.55 C
ATOM 16 N7 G A1198 29.982 109.839 119.169 1.00 41.02 N
ATOM 17 C5 G A1198 29.342 111.057 119.345 1.00 41.06 C
ATOM 18 C6 G A1198 28.012 111.341 119.738 1.00 41.51 C
ATOM 19 O6 G A1198 27.101 110.540 119.994 1.00 40.31 O
ATOM 20 N1 G A1198 27.780 112.715 119.801 1.00 40.43 N
ATOM 21 C2 G A1198 28.708 113.684 119.499 1.00 40.78 C
ATOM 22 N2 G A1198 28.296 114.954 119.578 1.00 41.94 N
ATOM 23 N3 G A1198 29.950 113.427 119.131 1.00 40.31 N
ATOM 24 C4 G A1198 30.196 112.105 119.072 1.00 39.80 C
ATOM 25 P G A1199 34.689 112.952 122.575 1.00 41.46 P
ATOM 26 OP1 G A1199 35.989 113.291 123.190 1.00 41.47 O
ATOM 27 OP2 G A1199 33.957 111.728 123.011 1.00 37.35 O
ATOM 28 O5' G A1199 33.762 114.227 122.748 1.00 38.89 O
TER

ATOM 1 O3' G B2025 31.012 117.068 117.627 1.00 42.60 O
ATOM 2 P G B2026 30.105 118.304 118.088 1.00 43.95 P
ATOM 3 OP1 G B2026 28.818 117.674 118.507 1.00 44.29 O
ATOM 4 OP2 G B2026 30.102 119.370 117.040 1.00 42.45 O
ATOM 5 O5' G B2026 30.870 118.835 119.378 1.00 41.59 O
ATOM 6 C5' G B2026 30.931 120.227 119.670 1.00 42.06 C
ATOM 7 C4' G B2026 32.281 120.582 120.235 1.00 42.21 C
ATOM 8 O4' G B2026 33.334 120.184 119.312 1.00 42.00 O
ATOM 9 C3' G B2026 32.487 122.075 120.394 1.00 43.10 C
ATOM 10 O3' G B2026 31.865 122.552 121.582 1.00 42.93 O
ATOM 11 C2' G B2026 34.005 122.185 120.394 1.00 43.49 C
ATOM 12 O2' G B2026 34.564 121.788 121.633 1.00 44.34 O
ATOM 13 C1' G B2026 34.375 121.153 119.323 1.00 42.12 C
ATOM 14 N9 G B2026 34.515 121.709 117.974 1.00 40.47 N
ATOM 15 C8 G B2026 33.698 121.468 116.899 1.00 41.04 C
ATOM 16 N7 G B2026 34.054 122.114 115.823 1.00 41.39 N
ATOM 17 C5 G B2026 35.178 122.829 116.206 1.00 42.26 C
ATOM 18 C6 G B2026 35.998 123.735 115.458 1.00 42.88 C
ATOM 19 O6 G B2026 35.867 124.112 114.279 1.00 40.95 O
ATOM 20 N1 G B2026 37.046 124.226 116.229 1.00 41.96 N
ATOM 21 C2 G B2026 37.272 123.912 117.548 1.00 42.76 C
ATOM 22 N2 G B2026 38.336 124.508 118.120 1.00 41.60 N
ATOM 23 N3 G B2026 36.511 123.081 118.257 1.00 41.97 N
ATOM 24 C4 G B2026 35.488 122.582 117.528 1.00 41.70 C
ATOM 25 P A B2027 31.071 123.947 121.564 1.00 42.30 P
ATOM 26 OP1 A B2027 30.315 124.025 122.840 1.00 43.47 O
ATOM 27 OP2 A B2027 30.355 124.103 120.277 1.00 43.72 O
ATOM 28 O5' A B2027 32.228 125.028 121.608 1.00 42.18 O
TER

Atoms:
OP1: (36.955,107.907,119.529)
OP2: (38.402,109.297,121.135)
C3': (33.959,112.213,120.184)
C1': (32.599,112.208,118.277)
C5': (34.994,109.956,119.592)
O6: (27.101,110.540,119.994)
O4': (33.603,111.223,118.092)
C8: (31.187,110.163,118.790)
C2: (28.708,113.684,119.499)
C6: (28.012,111.341,119.738)
C5: (29.342,111.057,119.345)
C4: (30.196,112.105,119.072)
P: (37.067,108.783,120.724)
C4': (34.607,111.336,119.132)
C2': (33.135,113.167,119.338)
O2': (33.917,114.150,118.693)
N1: (27.780,112.715,119.801)
N2: (28.296,114.954,119.578)
N3: (29.950,113.427,119.131)
N7: (29.982,109.839,119.169)
N9: (31.379,111.522,118.699)
O5': (36.093,110.026,120.514)
O3': (34.919,112.866,120.991)
OP1: (28.818,117.674,118.507)
OP2: (30.102,119.370,117.040)
C3': (32.487,122.075,120.394)
C1': (34.375,121.153,119.323)
C5': (30.931,120.227,119.670)
O6: (35.867,124.112,114.279)
O4': (33.334,120.184,119.312)
C8: (33.698,121.468,116.899)
C2: (37.272,123.912,117.548)
C6: (35.998,123.735,115.458)
C5: (35.178,122.829,116.206)
C4: (35.488,122.582,117.528)
P: (30.105,118.304,118.088)
C4': (32.281,120.582,120.235)
C2': (34.005,122.185,120.394)
O2': (34.564,121.788,121.633)
N1: (37.046,124.226,116.229)
N2: (38.336,124.508,118.120)
N3: (36.511,123.081,118.257)
N7: (34.054,122.114,115.823)
N9: (34.515,121.709,117.974)
O5': (30.870,118.835,119.378)
O3': (31.865,122.552,121.582)
Image (generated by PyMOL):
PyMOL image
show in jmol