Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A387:A246
Extra
PDB:
ATOM 1 O3' U A 386 -91.073 -38.147 58.633 1.00 1.03 O
ATOM 2 P G A 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 3 OP1 G A 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 4 OP2 G A 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 5 O5' G A 387 -93.374 -39.037 58.204 1.00 5.00 O
ATOM 6 C5' G A 387 -93.667 -38.969 59.579 1.00 5.00 C
ATOM 7 C4' G A 387 -93.821 -40.346 60.128 1.00 5.00 C
ATOM 8 O4' G A 387 -92.536 -40.950 60.280 1.00 5.00 O
ATOM 9 C3' G A 387 -94.457 -40.466 61.478 1.00 5.00 C
ATOM 10 O3' G A 387 -95.874 -40.433 61.389 1.00 5.00 O
ATOM 11 C2' G A 387 -93.911 -41.802 61.995 1.00 5.00 C
ATOM 12 O2' G A 387 -94.753 -42.873 61.610 1.00 5.00 O
ATOM 13 C1' G A 387 -92.595 -41.948 61.242 1.00 5.00 C
ATOM 14 N9 G A 387 -91.423 -41.820 62.096 1.00 5.19 N
ATOM 15 C8 G A 387 -91.173 -40.887 63.048 1.00 5.19 C
ATOM 16 N7 G A 387 -90.001 -41.034 63.596 1.00 5.19 N
ATOM 17 C5 G A 387 -89.460 -42.114 62.937 1.00 5.19 C
ATOM 18 C6 G A 387 -88.216 -42.736 63.101 1.00 5.19 C
ATOM 19 O6 G A 387 -87.313 -42.431 63.894 1.00 5.19 O
ATOM 20 N1 G A 387 -88.065 -43.810 62.235 1.00 5.19 N
ATOM 21 C2 G A 387 -88.981 -44.225 61.321 1.00 5.19 C
ATOM 22 N2 G A 387 -88.625 -45.286 60.575 1.00 5.19 N
ATOM 23 N3 G A 387 -90.152 -43.642 61.177 1.00 5.19 N
ATOM 24 C4 G A 387 -90.317 -42.606 62.006 1.00 5.19 C
ATOM 25 P G A 388 -96.680 -39.106 61.794 1.00 6.01 P
ATOM 26 OP1 G A 388 -98.110 -39.322 61.438 1.00 6.01 O
ATOM 27 OP2 G A 388 -95.962 -37.961 61.198 1.00 6.01 O
ATOM 28 O5' G A 388 -96.503 -39.091 63.371 1.00 6.01 O
TER
ATOM 1 O3' C B 245 -90.200 -48.265 59.293 1.00 0.01 O
ATOM 2 P G B 246 -90.992 -47.443 58.162 1.00 0.01 P
ATOM 3 OP1 G B 246 -90.237 -46.212 57.924 1.00 0.01 O
ATOM 4 OP2 G B 246 -92.416 -47.335 58.586 1.00 0.01 O
ATOM 5 O5' G B 246 -90.880 -48.393 56.909 1.00 0.01 O
ATOM 6 C5' G B 246 -89.645 -48.586 56.279 1.00 0.01 C
ATOM 7 C4' G B 246 -89.764 -49.485 55.080 1.00 0.01 C
ATOM 8 O4' G B 246 -89.993 -50.849 55.471 1.00 0.01 O
ATOM 9 C3' G B 246 -90.883 -49.212 54.107 1.00 0.01 C
ATOM 10 O3' G B 246 -90.636 -48.060 53.333 1.00 0.01 O
ATOM 11 C2' G B 246 -90.858 -50.491 53.294 1.00 0.01 C
ATOM 12 O2' G B 246 -89.838 -50.440 52.324 1.00 0.01 O
ATOM 13 C1' G B 246 -90.470 -51.541 54.352 1.00 0.01 C
ATOM 14 N9 G B 246 -91.618 -52.349 54.732 1.00 0.01 N
ATOM 15 C8 G B 246 -92.517 -52.120 55.704 1.00 0.01 C
ATOM 16 N7 G B 246 -93.474 -52.986 55.715 1.00 0.01 N
ATOM 17 C5 G B 246 -93.171 -53.795 54.666 1.00 0.01 C
ATOM 18 C6 G B 246 -93.868 -54.909 54.208 1.00 0.01 C
ATOM 19 O6 G B 246 -94.933 -55.392 54.656 1.00 0.01 O
ATOM 20 N1 G B 246 -93.211 -55.446 53.106 1.00 0.01 N
ATOM 21 C2 G B 246 -92.067 -54.965 52.554 1.00 0.01 C
ATOM 22 N2 G B 246 -91.638 -55.645 51.491 1.00 0.01 N
ATOM 23 N3 G B 246 -91.415 -53.926 53.001 1.00 0.01 N
ATOM 24 C4 G B 246 -92.039 -53.414 54.045 1.00 0.01 C
ATOM 25 P G B 247 -91.795 -47.317 52.520 1.00 0.01 P
ATOM 26 OP1 G B 247 -91.260 -46.005 52.108 1.00 0.01 O
ATOM 27 OP2 G B 247 -93.003 -47.362 53.332 1.00 0.01 O
ATOM 28 O5' G B 247 -91.979 -48.232 51.255 1.00 0.01 O
TER
ATOM 2 P G A 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 3 OP1 G A 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 4 OP2 G A 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 5 O5' G A 387 -93.374 -39.037 58.204 1.00 5.00 O
ATOM 6 C5' G A 387 -93.667 -38.969 59.579 1.00 5.00 C
ATOM 7 C4' G A 387 -93.821 -40.346 60.128 1.00 5.00 C
ATOM 8 O4' G A 387 -92.536 -40.950 60.280 1.00 5.00 O
ATOM 9 C3' G A 387 -94.457 -40.466 61.478 1.00 5.00 C
ATOM 10 O3' G A 387 -95.874 -40.433 61.389 1.00 5.00 O
ATOM 11 C2' G A 387 -93.911 -41.802 61.995 1.00 5.00 C
ATOM 12 O2' G A 387 -94.753 -42.873 61.610 1.00 5.00 O
ATOM 13 C1' G A 387 -92.595 -41.948 61.242 1.00 5.00 C
ATOM 14 N9 G A 387 -91.423 -41.820 62.096 1.00 5.19 N
ATOM 15 C8 G A 387 -91.173 -40.887 63.048 1.00 5.19 C
ATOM 16 N7 G A 387 -90.001 -41.034 63.596 1.00 5.19 N
ATOM 17 C5 G A 387 -89.460 -42.114 62.937 1.00 5.19 C
ATOM 18 C6 G A 387 -88.216 -42.736 63.101 1.00 5.19 C
ATOM 19 O6 G A 387 -87.313 -42.431 63.894 1.00 5.19 O
ATOM 20 N1 G A 387 -88.065 -43.810 62.235 1.00 5.19 N
ATOM 21 C2 G A 387 -88.981 -44.225 61.321 1.00 5.19 C
ATOM 22 N2 G A 387 -88.625 -45.286 60.575 1.00 5.19 N
ATOM 23 N3 G A 387 -90.152 -43.642 61.177 1.00 5.19 N
ATOM 24 C4 G A 387 -90.317 -42.606 62.006 1.00 5.19 C
ATOM 25 P G A 388 -96.680 -39.106 61.794 1.00 6.01 P
ATOM 26 OP1 G A 388 -98.110 -39.322 61.438 1.00 6.01 O
ATOM 27 OP2 G A 388 -95.962 -37.961 61.198 1.00 6.01 O
ATOM 28 O5' G A 388 -96.503 -39.091 63.371 1.00 6.01 O
TER
ATOM 1 O3' C B 245 -90.200 -48.265 59.293 1.00 0.01 O
ATOM 2 P G B 246 -90.992 -47.443 58.162 1.00 0.01 P
ATOM 3 OP1 G B 246 -90.237 -46.212 57.924 1.00 0.01 O
ATOM 4 OP2 G B 246 -92.416 -47.335 58.586 1.00 0.01 O
ATOM 5 O5' G B 246 -90.880 -48.393 56.909 1.00 0.01 O
ATOM 6 C5' G B 246 -89.645 -48.586 56.279 1.00 0.01 C
ATOM 7 C4' G B 246 -89.764 -49.485 55.080 1.00 0.01 C
ATOM 8 O4' G B 246 -89.993 -50.849 55.471 1.00 0.01 O
ATOM 9 C3' G B 246 -90.883 -49.212 54.107 1.00 0.01 C
ATOM 10 O3' G B 246 -90.636 -48.060 53.333 1.00 0.01 O
ATOM 11 C2' G B 246 -90.858 -50.491 53.294 1.00 0.01 C
ATOM 12 O2' G B 246 -89.838 -50.440 52.324 1.00 0.01 O
ATOM 13 C1' G B 246 -90.470 -51.541 54.352 1.00 0.01 C
ATOM 14 N9 G B 246 -91.618 -52.349 54.732 1.00 0.01 N
ATOM 15 C8 G B 246 -92.517 -52.120 55.704 1.00 0.01 C
ATOM 16 N7 G B 246 -93.474 -52.986 55.715 1.00 0.01 N
ATOM 17 C5 G B 246 -93.171 -53.795 54.666 1.00 0.01 C
ATOM 18 C6 G B 246 -93.868 -54.909 54.208 1.00 0.01 C
ATOM 19 O6 G B 246 -94.933 -55.392 54.656 1.00 0.01 O
ATOM 20 N1 G B 246 -93.211 -55.446 53.106 1.00 0.01 N
ATOM 21 C2 G B 246 -92.067 -54.965 52.554 1.00 0.01 C
ATOM 22 N2 G B 246 -91.638 -55.645 51.491 1.00 0.01 N
ATOM 23 N3 G B 246 -91.415 -53.926 53.001 1.00 0.01 N
ATOM 24 C4 G B 246 -92.039 -53.414 54.045 1.00 0.01 C
ATOM 25 P G B 247 -91.795 -47.317 52.520 1.00 0.01 P
ATOM 26 OP1 G B 247 -91.260 -46.005 52.108 1.00 0.01 O
ATOM 27 OP2 G B 247 -93.003 -47.362 53.332 1.00 0.01 O
ATOM 28 O5' G B 247 -91.979 -48.232 51.255 1.00 0.01 O
TER
Atoms:
OP1: (-91.728,-38.820,56.354)
OP2: (-92.720,-36.752,57.467)
C3': (-94.457,-40.466,61.478)
C1': (-92.595,-41.948,61.242)
C5': (-93.667,-38.969,59.579)
O6: (-87.313,-42.431,63.894)
O4': (-92.536,-40.950,60.280)
C8: (-91.173,-40.887,63.048)
C2: (-88.981,-44.225,61.321)
C6: (-88.216,-42.736,63.101)
C5: (-89.460,-42.114,62.937)
C4: (-90.317,-42.606,62.006)
P: (-92.248,-38.146,57.556)
C4': (-93.821,-40.346,60.128)
C2': (-93.911,-41.802,61.995)
O2': (-94.753,-42.873,61.610)
N1: (-88.065,-43.810,62.235)
N2: (-88.625,-45.286,60.575)
N3: (-90.152,-43.642,61.177)
N7: (-90.001,-41.034,63.596)
N9: (-91.423,-41.820,62.096)
O5': (-93.374,-39.037,58.204)
O3': (-95.874,-40.433,61.389)
OP2: (-92.720,-36.752,57.467)
C3': (-94.457,-40.466,61.478)
C1': (-92.595,-41.948,61.242)
C5': (-93.667,-38.969,59.579)
O6: (-87.313,-42.431,63.894)
O4': (-92.536,-40.950,60.280)
C8: (-91.173,-40.887,63.048)
C2: (-88.981,-44.225,61.321)
C6: (-88.216,-42.736,63.101)
C5: (-89.460,-42.114,62.937)
C4: (-90.317,-42.606,62.006)
P: (-92.248,-38.146,57.556)
C4': (-93.821,-40.346,60.128)
C2': (-93.911,-41.802,61.995)
O2': (-94.753,-42.873,61.610)
N1: (-88.065,-43.810,62.235)
N2: (-88.625,-45.286,60.575)
N3: (-90.152,-43.642,61.177)
N7: (-90.001,-41.034,63.596)
N9: (-91.423,-41.820,62.096)
O5': (-93.374,-39.037,58.204)
O3': (-95.874,-40.433,61.389)
OP1: (-90.237,-46.212,57.924)
OP2: (-92.416,-47.335,58.586)
C3': (-90.883,-49.212,54.107)
C1': (-90.470,-51.541,54.352)
C5': (-89.645,-48.586,56.279)
O6: (-94.933,-55.392,54.656)
O4': (-89.993,-50.849,55.471)
C8: (-92.517,-52.120,55.704)
C2: (-92.067,-54.965,52.554)
C6: (-93.868,-54.909,54.208)
C5: (-93.171,-53.795,54.666)
C4: (-92.039,-53.414,54.045)
P: (-90.992,-47.443,58.162)
C4': (-89.764,-49.485,55.080)
C2': (-90.858,-50.491,53.294)
O2': (-89.838,-50.440,52.324)
N1: (-93.211,-55.446,53.106)
N2: (-91.638,-55.645,51.491)
N3: (-91.415,-53.926,53.001)
N7: (-93.474,-52.986,55.715)
N9: (-91.618,-52.349,54.732)
O5': (-90.880,-48.393,56.909)
O3': (-90.636,-48.060,53.333)
OP2: (-92.416,-47.335,58.586)
C3': (-90.883,-49.212,54.107)
C1': (-90.470,-51.541,54.352)
C5': (-89.645,-48.586,56.279)
O6: (-94.933,-55.392,54.656)
O4': (-89.993,-50.849,55.471)
C8: (-92.517,-52.120,55.704)
C2: (-92.067,-54.965,52.554)
C6: (-93.868,-54.909,54.208)
C5: (-93.171,-53.795,54.666)
C4: (-92.039,-53.414,54.045)
P: (-90.992,-47.443,58.162)
C4': (-89.764,-49.485,55.080)
C2': (-90.858,-50.491,53.294)
O2': (-89.838,-50.440,52.324)
N1: (-93.211,-55.446,53.106)
N2: (-91.638,-55.645,51.491)
N3: (-91.415,-53.926,53.001)
N7: (-93.474,-52.986,55.715)
N9: (-91.618,-52.349,54.732)
O5': (-90.880,-48.393,56.909)
O3': (-90.636,-48.060,53.333)
Image (generated by PyMOL):