Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2308:A2309
Extra
PDB:
ATOM 1 O3' A A2307 -99.116 -46.613 46.809 1.00 1.96 O
ATOM 2 P U A2308 -98.723 -45.413 47.812 1.00 24.32 P
ATOM 3 OP1 U A2308 -98.493 -45.979 49.167 1.00 49.54 O
ATOM 4 OP2 U A2308 -99.701 -44.302 47.635 1.00 49.54 O
ATOM 5 O5' U A2308 -97.322 -44.942 47.236 1.00 16.21 O
ATOM 6 C5' U A2308 -96.126 -45.191 47.948 1.00 16.21 C
ATOM 7 C4' U A2308 -95.424 -43.892 48.187 1.00 16.21 C
ATOM 8 O4' U A2308 -94.767 -43.458 46.974 1.00 16.21 O
ATOM 9 C3' U A2308 -96.363 -42.755 48.535 1.00 16.21 C
ATOM 10 O3' U A2308 -96.682 -42.743 49.905 1.00 16.21 O
ATOM 11 C2' U A2308 -95.568 -41.535 48.111 1.00 16.21 C
ATOM 12 O2' U A2308 -94.586 -41.220 49.072 1.00 16.21 O
ATOM 13 C1' U A2308 -94.870 -42.052 46.855 1.00 16.21 C
ATOM 14 N1 U A2308 -95.618 -41.744 45.628 1.00 12.48 N
ATOM 15 C2 U A2308 -95.213 -40.664 44.884 1.00 12.48 C
ATOM 16 O2 U A2308 -94.269 -39.979 45.185 1.00 12.48 O
ATOM 17 N3 U A2308 -95.961 -40.415 43.769 1.00 12.48 N
ATOM 18 C4 U A2308 -97.058 -41.121 43.333 1.00 12.48 C
ATOM 19 O4 U A2308 -97.681 -40.726 42.342 1.00 12.48 O
ATOM 20 C5 U A2308 -97.410 -42.236 44.151 1.00 12.48 C
ATOM 21 C6 U A2308 -96.695 -42.503 45.242 1.00 12.48 C
ATOM 22 P A A2309 -98.073 -42.120 50.370 1.00 25.77 P
ATOM 23 OP1 A A2309 -98.325 -42.508 51.783 1.00 35.99 O
ATOM 24 OP2 A A2309 -99.094 -42.423 49.335 1.00 35.86 O
ATOM 25 O5' A A2309 -97.801 -40.558 50.327 1.00 19.42 O
TER
ATOM 1 O3' U B2308 -96.682 -42.743 49.905 1.00 16.21 O
ATOM 2 P A B2309 -98.073 -42.120 50.370 1.00 25.77 P
ATOM 3 OP1 A B2309 -98.325 -42.508 51.783 1.00 35.99 O
ATOM 4 OP2 A B2309 -99.094 -42.423 49.335 1.00 35.86 O
ATOM 5 O5' A B2309 -97.801 -40.558 50.327 1.00 19.42 O
ATOM 6 C5' A B2309 -98.896 -39.654 50.471 1.00 19.42 C
ATOM 7 C4' A B2309 -98.442 -38.244 50.232 1.00 19.42 C
ATOM 8 O4' A B2309 -97.561 -37.814 51.291 1.00 19.42 O
ATOM 9 C3' A B2309 -97.663 -38.020 48.954 1.00 19.42 C
ATOM 10 O3' A B2309 -98.574 -37.824 47.883 1.00 19.42 O
ATOM 11 C2' A B2309 -96.869 -36.764 49.279 1.00 19.42 C
ATOM 12 O2' A B2309 -97.668 -35.601 49.152 1.00 19.42 O
ATOM 13 C1' A B2309 -96.571 -36.962 50.765 1.00 19.42 C
ATOM 14 N9 A B2309 -95.275 -37.569 51.048 1.00 9.37 N
ATOM 15 C8 A B2309 -95.037 -38.832 51.520 1.00 9.70 C
ATOM 16 N7 A B2309 -93.770 -39.081 51.749 1.00 9.89 N
ATOM 17 C5 A B2309 -93.133 -37.908 51.386 1.00 9.79 C
ATOM 18 C6 A B2309 -91.794 -37.533 51.407 1.00 9.78 C
ATOM 19 N6 A B2309 -90.817 -38.324 51.853 1.00 9.60 N
ATOM 20 N1 A B2309 -91.481 -36.300 50.964 1.00 9.73 N
ATOM 21 C2 A B2309 -92.462 -35.503 50.555 1.00 9.66 C
ATOM 22 N3 A B2309 -93.770 -35.737 50.504 1.00 9.45 N
ATOM 23 C4 A B2309 -94.042 -36.976 50.937 1.00 9.52 C
ATOM 24 P A B2310 -98.214 -38.382 46.427 1.00 35.74 P
ATOM 25 OP1 A B2310 -99.379 -38.122 45.536 1.00 55.16 O
ATOM 26 OP2 A B2310 -97.708 -39.767 46.596 1.00 55.18 O
ATOM 27 O5' A B2310 -97.008 -37.444 45.977 1.00 29.86 O
TER
ATOM 2 P U A2308 -98.723 -45.413 47.812 1.00 24.32 P
ATOM 3 OP1 U A2308 -98.493 -45.979 49.167 1.00 49.54 O
ATOM 4 OP2 U A2308 -99.701 -44.302 47.635 1.00 49.54 O
ATOM 5 O5' U A2308 -97.322 -44.942 47.236 1.00 16.21 O
ATOM 6 C5' U A2308 -96.126 -45.191 47.948 1.00 16.21 C
ATOM 7 C4' U A2308 -95.424 -43.892 48.187 1.00 16.21 C
ATOM 8 O4' U A2308 -94.767 -43.458 46.974 1.00 16.21 O
ATOM 9 C3' U A2308 -96.363 -42.755 48.535 1.00 16.21 C
ATOM 10 O3' U A2308 -96.682 -42.743 49.905 1.00 16.21 O
ATOM 11 C2' U A2308 -95.568 -41.535 48.111 1.00 16.21 C
ATOM 12 O2' U A2308 -94.586 -41.220 49.072 1.00 16.21 O
ATOM 13 C1' U A2308 -94.870 -42.052 46.855 1.00 16.21 C
ATOM 14 N1 U A2308 -95.618 -41.744 45.628 1.00 12.48 N
ATOM 15 C2 U A2308 -95.213 -40.664 44.884 1.00 12.48 C
ATOM 16 O2 U A2308 -94.269 -39.979 45.185 1.00 12.48 O
ATOM 17 N3 U A2308 -95.961 -40.415 43.769 1.00 12.48 N
ATOM 18 C4 U A2308 -97.058 -41.121 43.333 1.00 12.48 C
ATOM 19 O4 U A2308 -97.681 -40.726 42.342 1.00 12.48 O
ATOM 20 C5 U A2308 -97.410 -42.236 44.151 1.00 12.48 C
ATOM 21 C6 U A2308 -96.695 -42.503 45.242 1.00 12.48 C
ATOM 22 P A A2309 -98.073 -42.120 50.370 1.00 25.77 P
ATOM 23 OP1 A A2309 -98.325 -42.508 51.783 1.00 35.99 O
ATOM 24 OP2 A A2309 -99.094 -42.423 49.335 1.00 35.86 O
ATOM 25 O5' A A2309 -97.801 -40.558 50.327 1.00 19.42 O
TER
ATOM 1 O3' U B2308 -96.682 -42.743 49.905 1.00 16.21 O
ATOM 2 P A B2309 -98.073 -42.120 50.370 1.00 25.77 P
ATOM 3 OP1 A B2309 -98.325 -42.508 51.783 1.00 35.99 O
ATOM 4 OP2 A B2309 -99.094 -42.423 49.335 1.00 35.86 O
ATOM 5 O5' A B2309 -97.801 -40.558 50.327 1.00 19.42 O
ATOM 6 C5' A B2309 -98.896 -39.654 50.471 1.00 19.42 C
ATOM 7 C4' A B2309 -98.442 -38.244 50.232 1.00 19.42 C
ATOM 8 O4' A B2309 -97.561 -37.814 51.291 1.00 19.42 O
ATOM 9 C3' A B2309 -97.663 -38.020 48.954 1.00 19.42 C
ATOM 10 O3' A B2309 -98.574 -37.824 47.883 1.00 19.42 O
ATOM 11 C2' A B2309 -96.869 -36.764 49.279 1.00 19.42 C
ATOM 12 O2' A B2309 -97.668 -35.601 49.152 1.00 19.42 O
ATOM 13 C1' A B2309 -96.571 -36.962 50.765 1.00 19.42 C
ATOM 14 N9 A B2309 -95.275 -37.569 51.048 1.00 9.37 N
ATOM 15 C8 A B2309 -95.037 -38.832 51.520 1.00 9.70 C
ATOM 16 N7 A B2309 -93.770 -39.081 51.749 1.00 9.89 N
ATOM 17 C5 A B2309 -93.133 -37.908 51.386 1.00 9.79 C
ATOM 18 C6 A B2309 -91.794 -37.533 51.407 1.00 9.78 C
ATOM 19 N6 A B2309 -90.817 -38.324 51.853 1.00 9.60 N
ATOM 20 N1 A B2309 -91.481 -36.300 50.964 1.00 9.73 N
ATOM 21 C2 A B2309 -92.462 -35.503 50.555 1.00 9.66 C
ATOM 22 N3 A B2309 -93.770 -35.737 50.504 1.00 9.45 N
ATOM 23 C4 A B2309 -94.042 -36.976 50.937 1.00 9.52 C
ATOM 24 P A B2310 -98.214 -38.382 46.427 1.00 35.74 P
ATOM 25 OP1 A B2310 -99.379 -38.122 45.536 1.00 55.16 O
ATOM 26 OP2 A B2310 -97.708 -39.767 46.596 1.00 55.18 O
ATOM 27 O5' A B2310 -97.008 -37.444 45.977 1.00 29.86 O
TER
Atoms:
C4: (-97.058,-41.121,43.333)
N3: (-95.961,-40.415,43.769)
OP1: (-98.493,-45.979,49.167)
OP2: (-99.701,-44.302,47.635)
C2: (-95.213,-40.664,44.884)
C1': (-94.870,-42.052,46.855)
C3': (-96.363,-42.755,48.535)
O5': (-97.322,-44.942,47.236)
O4': (-94.767,-43.458,46.974)
C5': (-96.126,-45.191,47.948)
P: (-98.723,-45.413,47.812)
C4': (-95.424,-43.892,48.187)
C2': (-95.568,-41.535,48.111)
O2': (-94.586,-41.220,49.072)
N1: (-95.618,-41.744,45.628)
O4: (-97.681,-40.726,42.342)
O2: (-94.269,-39.979,45.185)
C6: (-96.695,-42.503,45.242)
C5: (-97.410,-42.236,44.151)
O3': (-96.682,-42.743,49.905)
N3: (-95.961,-40.415,43.769)
OP1: (-98.493,-45.979,49.167)
OP2: (-99.701,-44.302,47.635)
C2: (-95.213,-40.664,44.884)
C1': (-94.870,-42.052,46.855)
C3': (-96.363,-42.755,48.535)
O5': (-97.322,-44.942,47.236)
O4': (-94.767,-43.458,46.974)
C5': (-96.126,-45.191,47.948)
P: (-98.723,-45.413,47.812)
C4': (-95.424,-43.892,48.187)
C2': (-95.568,-41.535,48.111)
O2': (-94.586,-41.220,49.072)
N1: (-95.618,-41.744,45.628)
O4: (-97.681,-40.726,42.342)
O2: (-94.269,-39.979,45.185)
C6: (-96.695,-42.503,45.242)
C5: (-97.410,-42.236,44.151)
O3': (-96.682,-42.743,49.905)
OP1: (-98.325,-42.508,51.783)
OP2: (-99.094,-42.423,49.335)
C3': (-97.663,-38.020,48.954)
C1': (-96.571,-36.962,50.765)
C5': (-98.896,-39.654,50.471)
O4': (-97.561,-37.814,51.291)
C8: (-95.037,-38.832,51.520)
O2': (-97.668,-35.601,49.152)
C6: (-91.794,-37.533,51.407)
C5: (-93.133,-37.908,51.386)
C4: (-94.042,-36.976,50.937)
P: (-98.073,-42.120,50.370)
C4': (-98.442,-38.244,50.232)
C2': (-96.869,-36.764,49.279)
C2: (-92.462,-35.503,50.555)
N1: (-91.481,-36.300,50.964)
N3: (-93.770,-35.737,50.504)
N6: (-90.817,-38.324,51.853)
N7: (-93.770,-39.081,51.749)
N9: (-95.275,-37.569,51.048)
O5': (-97.801,-40.558,50.327)
O3': (-98.574,-37.824,47.883)
OP2: (-99.094,-42.423,49.335)
C3': (-97.663,-38.020,48.954)
C1': (-96.571,-36.962,50.765)
C5': (-98.896,-39.654,50.471)
O4': (-97.561,-37.814,51.291)
C8: (-95.037,-38.832,51.520)
O2': (-97.668,-35.601,49.152)
C6: (-91.794,-37.533,51.407)
C5: (-93.133,-37.908,51.386)
C4: (-94.042,-36.976,50.937)
P: (-98.073,-42.120,50.370)
C4': (-98.442,-38.244,50.232)
C2': (-96.869,-36.764,49.279)
C2: (-92.462,-35.503,50.555)
N1: (-91.481,-36.300,50.964)
N3: (-93.770,-35.737,50.504)
N6: (-90.817,-38.324,51.853)
N7: (-93.770,-39.081,51.749)
N9: (-95.275,-37.569,51.048)
O5': (-97.801,-40.558,50.327)
O3': (-98.574,-37.824,47.883)
Image (generated by PyMOL):