ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QUW:B20:B21

Extra

PDB:
ATOM 1 O3' C A 19 -6.625 -21.678 7.002 1.00 66.91 O
ATOM 2 P U A 20 -6.030 -21.984 8.446 1.00 68.85 P
ATOM 3 OP1 U A 20 -4.919 -22.957 8.357 1.00 68.60 O
ATOM 4 OP2 U A 20 -7.258 -22.238 9.222 1.00 69.64 O
ATOM 5 O5' U A 20 -5.417 -20.602 8.986 1.00 69.03 O
ATOM 6 C5' U A 20 -4.665 -19.734 8.132 1.00 69.00 C
ATOM 7 C4' U A 20 -5.379 -18.411 7.863 1.00 68.47 C
ATOM 8 O4' U A 20 -6.430 -18.519 6.852 1.00 68.67 O
ATOM 9 C3' U A 20 -6.237 -17.802 8.967 1.00 68.41 C
ATOM 10 O3' U A 20 -5.678 -17.651 10.328 1.00 68.26 O
ATOM 11 C2' U A 20 -6.709 -16.588 8.161 1.00 67.63 C
ATOM 12 O2' U A 20 -5.697 -15.740 7.669 1.00 68.78 O
ATOM 13 C1' U A 20 -7.297 -17.397 7.002 1.00 67.33 C
ATOM 14 N1 U A 20 -8.705 -17.809 7.331 1.00 66.96 N
ATOM 15 C2 U A 20 -9.722 -16.869 7.204 1.00 67.14 C
ATOM 16 O2 U A 20 -9.557 -15.724 6.803 1.00 67.71 O
ATOM 17 N3 U A 20 -10.971 -17.305 7.550 1.00 66.14 N
ATOM 18 C4 U A 20 -11.318 -18.555 8.012 1.00 67.37 C
ATOM 19 O4 U A 20 -12.498 -18.791 8.273 1.00 67.83 O
ATOM 20 C5 U A 20 -10.219 -19.480 8.130 1.00 67.58 C
ATOM 21 C6 U A 20 -8.979 -19.082 7.797 1.00 67.37 C
ATOM 22 P G A 21 -4.461 -16.706 10.696 1.00 68.00 P
ATOM 23 OP1 G A 21 -3.624 -16.603 9.476 1.00 68.33 O
ATOM 24 OP2 G A 21 -3.866 -17.131 11.974 1.00 68.05 O
ATOM 25 O5' G A 21 -5.207 -15.342 11.029 1.00 67.85 O
TER

ATOM 1 O3' U B 20 -5.678 -17.651 10.328 1.00 68.26 O
ATOM 2 P G B 21 -4.461 -16.706 10.696 1.00 68.00 P
ATOM 3 OP1 G B 21 -3.624 -16.603 9.476 1.00 68.33 O
ATOM 4 OP2 G B 21 -3.866 -17.131 11.974 1.00 68.05 O
ATOM 5 O5' G B 21 -5.207 -15.342 11.029 1.00 67.85 O
ATOM 6 C5' G B 21 -5.931 -15.124 12.255 1.00 65.38 C
ATOM 7 C4' G B 21 -6.638 -13.789 12.172 1.00 64.18 C
ATOM 8 O4' G B 21 -5.676 -12.793 11.743 1.00 64.14 O
ATOM 9 C3' G B 21 -7.725 -13.736 11.111 1.00 63.46 C
ATOM 10 O3' G B 21 -8.945 -14.163 11.679 1.00 64.49 O
ATOM 11 C2' G B 21 -7.743 -12.259 10.733 1.00 63.56 C
ATOM 12 O2' G B 21 -8.401 -11.450 11.690 1.00 64.01 O
ATOM 13 C1' G B 21 -6.265 -11.934 10.782 1.00 61.61 C
ATOM 14 N9 G B 21 -5.494 -11.894 9.530 1.00 61.20 N
ATOM 15 C8 G B 21 -4.544 -12.777 9.076 1.00 60.95 C
ATOM 16 N7 G B 21 -3.998 -12.442 7.924 1.00 61.08 N
ATOM 17 C5 G B 21 -4.610 -11.241 7.583 1.00 61.25 C
ATOM 18 C6 G B 21 -4.449 -10.384 6.444 1.00 61.13 C
ATOM 19 O6 G B 21 -3.706 -10.504 5.475 1.00 60.76 O
ATOM 20 N1 G B 21 -5.287 -9.269 6.471 1.00 61.35 N
ATOM 21 C2 G B 21 -6.167 -9.015 7.500 1.00 60.84 C
ATOM 22 N2 G B 21 -6.891 -7.895 7.371 1.00 60.84 N
ATOM 23 N3 G B 21 -6.335 -9.806 8.565 1.00 60.46 N
ATOM 24 C4 G B 21 -5.536 -10.898 8.559 1.00 60.93 C
ATOM 25 P A B 22 -9.980 -15.034 10.842 1.00 66.04 P
ATOM 26 OP1 A B 22 -11.172 -15.335 11.680 1.00 65.42 O
ATOM 27 OP2 A B 22 -9.208 -16.132 10.231 1.00 66.80 O
ATOM 28 O5' A B 22 -10.434 -14.031 9.695 1.00 66.16 O
TER

Atoms:
C4: (-11.318,-18.555,8.012)
N3: (-10.971,-17.305,7.550)
OP1: (-4.919,-22.957,8.357)
OP2: (-7.258,-22.238,9.222)
C2: (-9.722,-16.869,7.204)
C1': (-7.297,-17.397,7.002)
C3': (-6.237,-17.802,8.967)
O5': (-5.417,-20.602,8.986)
O4': (-6.430,-18.519,6.852)
C5': (-4.665,-19.734,8.132)
P: (-6.030,-21.984,8.446)
C4': (-5.379,-18.411,7.863)
C2': (-6.709,-16.588,8.161)
O2': (-5.697,-15.740,7.669)
N1: (-8.705,-17.809,7.331)
O4: (-12.498,-18.791,8.273)
O2: (-9.557,-15.724,6.803)
C6: (-8.979,-19.082,7.797)
C5: (-10.219,-19.480,8.130)
O3': (-5.678,-17.651,10.328)
OP1: (-3.624,-16.603,9.476)
OP2: (-3.866,-17.131,11.974)
C3': (-7.725,-13.736,11.111)
C1': (-6.265,-11.934,10.782)
C5': (-5.931,-15.124,12.255)
O6: (-3.706,-10.504,5.475)
O4': (-5.676,-12.793,11.743)
C8: (-4.544,-12.777,9.076)
C2: (-6.167,-9.015,7.500)
C6: (-4.449,-10.384,6.444)
C5: (-4.610,-11.241,7.583)
C4: (-5.536,-10.898,8.559)
P: (-4.461,-16.706,10.696)
C4': (-6.638,-13.789,12.172)
C2': (-7.743,-12.259,10.733)
O2': (-8.401,-11.450,11.690)
N1: (-5.287,-9.269,6.471)
N2: (-6.891,-7.895,7.371)
N3: (-6.335,-9.806,8.565)
N7: (-3.998,-12.442,7.924)
N9: (-5.494,-11.894,9.530)
O5': (-5.207,-15.342,11.029)
O3': (-8.945,-14.163,11.679)
Image (generated by PyMOL):
PyMOL image
show in jmol